RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 MAD2L2Q9UI95 211 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 SNED1Q8TER0 1413 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
SPG11-217ENST00000559511 RHBDL3P58872 404 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 ATP2C1P98194 919 aaPredicted RBP12.61□□□□□ -0.39
SPG11-217ENST00000559511 EN1Q05925 392 aaPredicted RBP12.61□□□□□ -0.39
SPG11-217ENST00000559511 FMR1Q06787 632 aaKnown RBP eCLIP12.61□□□□□ -0.391e-6■■■■□ 21.9
SPG11-217ENST00000559511 SLC15A2Q16348 729 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 TPD52L1Q16890 204 aaPredicted RBP12.61□□□□□ -0.39
SPG11-217ENST00000559511 CERS3Q8IU89 383 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 SPATA20Q8TB22 786 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 TCP11L1Q9NUJ3 509 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 VWA3AA6NCI4 1184 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 RRP9O43818 475 aaKnown RBP12.61□□□□□ -0.39
SPG11-217ENST00000559511 BMP15O95972 392 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 NT5C2P49902 561 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 UBASH3AP57075 661 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 TYW1BQ6NUM6 668 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 KANK3Q6NY19 840 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 C2CD5Q86YS7 1000 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 TEX11Q8IYF3 940 aa12.61□□□□□ -0.39
SPG11-217ENST00000559511 ZNF444Q8N0Y2 327 aaPredicted RBP12.61□□□□□ -0.39
SPG11-217ENST00000559511 ZNF622Q969S3 477 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPG11-217ENST00000559511 CYTH3O43739 400 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 SERPINC1P01008 464 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 TNNT1P13805 278 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 CASP1P29466 404 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 HSP90AA2PQ14568 343 aaPredicted RBP12.6□□□□□ -0.39
SPG11-217ENST00000559511 IL17AQ16552 155 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 DOK7Q18PE1 504 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 HSP90AA4PQ58FG1 418 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 RASGRP2Q7LDG7 609 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 SLF2Q8IX21 1173 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 CERS5Q8N5B7 392 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 TMEM47Q9BQJ4 181 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 STX8Q9UNK0 236 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 MTMR7Q9Y216 660 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 GOLGB1Q14789 3259 aaKnown RBP12.6□□□□□ -0.39
SPG11-217ENST00000559511 FLT1P17948 1338 aa12.6□□□□□ -0.39
SPG11-217ENST00000559511 SLFN14P0C7P3 912 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 PLCG2P16885 1265 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 MCM7P33993 719 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 AFMP43652 599 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 PTPN21Q16825 1174 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 SH3RF1Q7Z6J0 888 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 TRMT44Q8IYL2 757 aaKnown RBP12.59□□□□□ -0.39
SPG11-217ENST00000559511 TRIML1Q8N9V2 468 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 MLKLQ8NB16 471 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 CCDC150Q8NCX0 1101 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 PAGE5Q96GU1 130 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 MED15Q96RN5 788 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 INTS13Q9NVM9 706 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 DAGLAQ9Y4D2 1042 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 TMEM232C9JQI7 657 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 TRAPPC10P48553 1259 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 CDK8P49336 464 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 CFAP100Q494V2 611 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 NYAP1Q6ZVC0 841 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 C16orf86Q6ZW13 317 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 BLIDQ8IZY5 108 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 CCAR2Q8N163 923 aaKnown RBP12.59□□□□□ -0.39
SPG11-217ENST00000559511 RASGRP4Q8TDF6 673 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 SH3GLB2Q9NR46 395 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 TRMT1Q9NXH9 659 aaKnown RBP12.59□□□□□ -0.39
SPG11-217ENST00000559511 PCDHA4Q9UN74 947 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 SUGT1Q9Y2Z0 365 aa12.59□□□□□ -0.39
SPG11-217ENST00000559511 H0YIN7 160 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 M0R2N6 131 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 MYO1BO43795 1136 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 GOLGA8HP0CJ92 632 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 SFPQP23246 707 aaKnown RBP eCLIP12.58□□□□□ -0.4
SPG11-217ENST00000559511 CALML3P27482 149 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 CCDC178Q5BJE1 867 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 WWC2Q6AWC2 1192 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 ENOX1Q8TC92 643 aaKnown RBP12.58□□□□□ -0.4
SPG11-217ENST00000559511 EYA3Q99504 573 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 MXD3Q9BW11 206 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 TMX4Q9H1E5 349 aaPredicted RBP12.58□□□□□ -0.4
SPG11-217ENST00000559511 STK32BQ9NY57 414 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 NFE2L3Q9Y4A8 694 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 PALM3A6NDB9 673 aaPredicted RBP12.58□□□□□ -0.4
SPG11-217ENST00000559511 F8W031 263 aaPredicted RBP12.58□□□□□ -0.4
SPG11-217ENST00000559511 CBFA2T2O43439 604 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 ZNF18P17022 549 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 CHRNA5P30532 468 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 GNAQP50148 359 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 E2F4Q16254 413 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 E4F1Q66K89 784 aaPredicted RBP12.58□□□□□ -0.4
SPG11-217ENST00000559511 VSTM4Q8IW00 320 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 CPVLQ9H3G5 476 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 KCND1Q9NSA2 647 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 DACH1Q9UI36 760 aa12.58□□□□□ -0.4
SPG11-217ENST00000559511 DPYDQ12882 1025 aa12.57□□□□□ -0.4
SPG11-217ENST00000559511 ZNF710Q8N1W2 664 aa12.57□□□□□ -0.4
SPG11-217ENST00000559511 C4orf32Q8N8J7 132 aa12.57□□□□□ -0.4
SPG11-217ENST00000559511 STAMQ92783 540 aa12.57□□□□□ -0.4
SPG11-217ENST00000559511 PSME4Q14997 1843 aa12.57□□□□□ -0.4
SPG11-217ENST00000559511 STXBP3O00186 592 aa12.56□□□□□ -0.4
SPG11-217ENST00000559511 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms