RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 M0R2C6 588 aa17.86■□□□□ 0.45
LRRC28-213ENST00000559399 DNM1LO00429 736 aa17.86■□□□□ 0.45
LRRC28-213ENST00000559399 ERC2O15083 957 aa17.86■□□□□ 0.45
LRRC28-213ENST00000559399 FCER1AP12319 257 aa17.86■□□□□ 0.45
LRRC28-213ENST00000559399 LRRC26Q2I0M4 334 aa17.86■□□□□ 0.45
LRRC28-213ENST00000559399 FAM83BQ5T0W9 1011 aa17.86■□□□□ 0.45
LRRC28-213ENST00000559399 STK11IPQ8N1F8 1099 aa17.86■□□□□ 0.45
LRRC28-213ENST00000559399 ZNF287Q9HBT7 754 aa17.86■□□□□ 0.45
LRRC28-213ENST00000559399 EPB41L4AQ9HCS5 686 aaPredicted RBP17.86■□□□□ 0.45
LRRC28-213ENST00000559399 PPP1R9AQ9ULJ8 1098 aa17.86■□□□□ 0.45
LRRC28-213ENST00000559399 A0A0G2JMZ2 1700 aa17.86■□□□□ 0.45
LRRC28-213ENST00000559399 VWA5AO00534 786 aa17.85■□□□□ 0.45
LRRC28-213ENST00000559399 APPP05067 770 aa17.85■□□□□ 0.45
LRRC28-213ENST00000559399 MAGEA10P43363 369 aaPredicted RBP17.85■□□□□ 0.45
LRRC28-213ENST00000559399 RIOX2Q8IUF8 465 aa17.85■□□□□ 0.45
LRRC28-213ENST00000559399 SENP6Q9GZR1 1112 aaPredicted RBP17.85■□□□□ 0.45
LRRC28-213ENST00000559399 SEPT4O43236 478 aa17.84■□□□□ 0.45
LRRC28-213ENST00000559399 COPB2P35606 906 aa17.84■□□□□ 0.45
LRRC28-213ENST00000559399 PI4K2BQ8TCG2 481 aa17.84■□□□□ 0.45
LRRC28-213ENST00000559399 MAML3Q96JK9 1138 aa17.84■□□□□ 0.45
LRRC28-213ENST00000559399 MMP19Q99542 508 aa17.84■□□□□ 0.45
LRRC28-213ENST00000559399 FSD1Q9BTV5 496 aa17.84■□□□□ 0.45
LRRC28-213ENST00000559399 NYAP2Q9P242 653 aa17.84■□□□□ 0.45
LRRC28-213ENST00000559399 ZNF214Q9UL59 606 aaPredicted RBP17.84■□□□□ 0.45
LRRC28-213ENST00000559399 ZNF236Q9UL36 1845 aa17.84■□□□□ 0.45
LRRC28-213ENST00000559399 STAT3P40763 770 aa17.83■□□□□ 0.44
LRRC28-213ENST00000559399 RRP1P56182 461 aaKnown RBP17.83■□□□□ 0.44
LRRC28-213ENST00000559399 KCTD2Q14681 263 aa17.83■□□□□ 0.44
LRRC28-213ENST00000559399 ZNF444Q8N0Y2 327 aaPredicted RBP17.83■□□□□ 0.44
LRRC28-213ENST00000559399 OTUD7AQ8TE49 926 aaPredicted RBP17.83■□□□□ 0.44
LRRC28-213ENST00000559399 NUP88Q99567 741 aaPredicted RBP17.83■□□□□ 0.44
LRRC28-213ENST00000559399 SLF1Q9BQI6 1058 aa17.83■□□□□ 0.44
LRRC28-213ENST00000559399 NACAP1Q9BZK3 213 aa17.83■□□□□ 0.44
LRRC28-213ENST00000559399 IGKV6D-41A0A0C4DH26 115 aa17.82■□□□□ 0.44
LRRC28-213ENST00000559399 PATL2C9JE40 543 aaKnown RBP17.82■□□□□ 0.44
LRRC28-213ENST00000559399 F5H6K3 240 aa17.82■□□□□ 0.44
LRRC28-213ENST00000559399 SOX1O00570 391 aaPredicted RBP17.82■□□□□ 0.44
LRRC28-213ENST00000559399 PRDM1O75626 825 aa17.82■□□□□ 0.44
LRRC28-213ENST00000559399 NDUFB10O96000 172 aa17.82■□□□□ 0.44
LRRC28-213ENST00000559399 MX1P20591 662 aa17.82■□□□□ 0.44
LRRC28-213ENST00000559399 KLRC3Q07444 240 aa17.82■□□□□ 0.44
LRRC28-213ENST00000559399 ARRDC4Q8NCT1 418 aa17.82■□□□□ 0.44
LRRC28-213ENST00000559399 REPS2Q8NFH8 660 aa17.82■□□□□ 0.44
LRRC28-213ENST00000559399 ANO1Q5XXA6 986 aa17.81■□□□□ 0.44
LRRC28-213ENST00000559399 IFNL3Q8IZI9 196 aa17.81■□□□□ 0.44
LRRC28-213ENST00000559399 TDHQ8IZJ6 230 aa17.81■□□□□ 0.44
LRRC28-213ENST00000559399 LRCH3Q96II8 777 aa17.81■□□□□ 0.44
LRRC28-213ENST00000559399 SEC62Q99442 399 aaKnown RBP17.81■□□□□ 0.44
LRRC28-213ENST00000559399 TEX13BQ9BXU2 312 aa17.81■□□□□ 0.44
LRRC28-213ENST00000559399 UBE2OQ9C0C9 1292 aaKnown RBP17.81■□□□□ 0.44
LRRC28-213ENST00000559399 CLIP2Q9UDT6 1046 aa17.81■□□□□ 0.44
LRRC28-213ENST00000559399 NRBP1Q9UHY1 535 aa17.81■□□□□ 0.44
LRRC28-213ENST00000559399 SYNPO2Q9UMS6 1093 aa17.81■□□□□ 0.44
LRRC28-213ENST00000559399 KBTBD13C9JR72 458 aa17.8■□□□□ 0.44
LRRC28-213ENST00000559399 PGK2P07205 417 aa17.8■□□□□ 0.44
LRRC28-213ENST00000559399 SLC3A2P08195 630 aaKnown RBP17.8■□□□□ 0.44
LRRC28-213ENST00000559399 ATN1P54259 1190 aaPredicted RBP17.8■□□□□ 0.44
LRRC28-213ENST00000559399 ZMYM1Q5SVZ6 1142 aa17.8■□□□□ 0.44
LRRC28-213ENST00000559399 PRAMEF19Q5SWL8 479 aa17.8■□□□□ 0.44
LRRC28-213ENST00000559399 GJC2Q5T442 439 aaPredicted RBP17.8■□□□□ 0.44
LRRC28-213ENST00000559399 CEP95Q96GE4 821 aa17.8■□□□□ 0.44
LRRC28-213ENST00000559399 NAPBQ9H115 298 aa17.8■□□□□ 0.44
LRRC28-213ENST00000559399 ZBTB47Q9UFB7 747 aaPredicted RBP17.8■□□□□ 0.44
LRRC28-213ENST00000559399 DIS3Q9Y2L1 958 aaKnown RBP17.8■□□□□ 0.44
LRRC28-213ENST00000559399 LAMA3Q16787 3333 aa17.8■□□□□ 0.44
LRRC28-213ENST00000559399 SZT2Q5T011 3432 aa17.79■□□□□ 0.44
LRRC28-213ENST00000559399 TTLL1O95922 423 aa17.79■□□□□ 0.44
LRRC28-213ENST00000559399 MYCNP04198 464 aaPredicted RBP17.79■□□□□ 0.44
LRRC28-213ENST00000559399 TSPY3P0CV98 308 aa17.79■□□□□ 0.44
LRRC28-213ENST00000559399 TSPY8P0CW00 308 aa17.79■□□□□ 0.44
LRRC28-213ENST00000559399 PDE4BQ07343 736 aa17.79■□□□□ 0.44
LRRC28-213ENST00000559399 ZNF792Q3KQV3 632 aa17.79■□□□□ 0.44
LRRC28-213ENST00000559399 SNRNP48Q6IEG0 339 aaKnown RBP17.79■□□□□ 0.44
LRRC28-213ENST00000559399 PRPF38AQ8NAV1 312 aaKnown RBP17.79■□□□□ 0.44
LRRC28-213ENST00000559399 MTMR4Q9NYA4 1195 aa17.79■□□□□ 0.44
LRRC28-213ENST00000559399 PLIN4Q96Q06 1357 aa17.79■□□□□ 0.44
LRRC28-213ENST00000559399 RLFQ13129 1914 aa17.78■□□□□ 0.44
LRRC28-213ENST00000559399 BAZ2AQ9UIF9 1905 aaKnown RBP17.78■□□□□ 0.44
LRRC28-213ENST00000559399 MDM2Q00987 491 aaPredicted RBP17.78■□□□□ 0.44
LRRC28-213ENST00000559399 PPARAQ07869 468 aa17.78■□□□□ 0.44
LRRC28-213ENST00000559399 LRIT3Q3SXY7 679 aa17.78■□□□□ 0.44
LRRC28-213ENST00000559399 FAM47AQ5JRC9 791 aa17.78■□□□□ 0.44
LRRC28-213ENST00000559399 LRRC47Q8N1G4 583 aaKnown RBP17.78■□□□□ 0.44
LRRC28-213ENST00000559399 GMCL1P1Q8NEA9 526 aa17.78■□□□□ 0.44
LRRC28-213ENST00000559399 MKL1Q969V6 931 aa17.78■□□□□ 0.44
LRRC28-213ENST00000559399 TINF2Q9BSI4 451 aa17.78■□□□□ 0.44
LRRC28-213ENST00000559399 CTDP1Q9Y5B0 961 aaPredicted RBP17.78■□□□□ 0.44
LRRC28-213ENST00000559399 SALL3Q9BXA9 1300 aa17.77■□□□□ 0.44
LRRC28-213ENST00000559399 ALPK3Q96L96 1907 aa17.77■□□□□ 0.44
LRRC28-213ENST00000559399 ATP2A1O14983 1001 aa17.77■□□□□ 0.44
LRRC28-213ENST00000559399 ZBED4O75132 1171 aa17.77■□□□□ 0.44
LRRC28-213ENST00000559399 RARBP10826 455 aa17.77■□□□□ 0.44
LRRC28-213ENST00000559399 RTP1P59025 263 aa17.77■□□□□ 0.44
LRRC28-213ENST00000559399 ANKRD45Q5TZF3 282 aa17.77■□□□□ 0.44
LRRC28-213ENST00000559399 NEDD1Q8NHV4 660 aa17.77■□□□□ 0.44
LRRC28-213ENST00000559399 KIFC2Q96AC6 838 aa17.77■□□□□ 0.44
LRRC28-213ENST00000559399 CRBNQ96SW2 442 aa17.77■□□□□ 0.44
LRRC28-213ENST00000559399 LBHD1Q9BQE6 289 aaPredicted RBP17.77■□□□□ 0.44
LRRC28-213ENST00000559399 PRKAG2Q9UGJ0 569 aa17.77■□□□□ 0.44
LRRC28-213ENST00000559399 TFAP4Q01664 338 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms