RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 TFRCP02786 760 aaKnown RBP20.28■□□□□ 0.84
LRRC28-210ENST00000558879 MNX1P50219 401 aaPredicted RBP20.28■□□□□ 0.84
LRRC28-210ENST00000558879 NPLOC4Q8TAT6 608 aa20.28■□□□□ 0.84
LRRC28-210ENST00000558879 RWDD1Q9H446 243 aaPredicted RBP20.28■□□□□ 0.84
LRRC28-210ENST00000558879 FBXO28Q9NVF7 368 aa20.28■□□□□ 0.84
LRRC28-210ENST00000558879 OGDHLQ9ULD0 1010 aa20.28■□□□□ 0.84
LRRC28-210ENST00000558879 PPP1R9AQ9ULJ8 1098 aa20.28■□□□□ 0.84
LRRC28-210ENST00000558879 SYNPO2Q9UMS6 1093 aa20.28■□□□□ 0.84
LRRC28-210ENST00000558879 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.28■□□□□ 0.84
LRRC28-210ENST00000558879 LCTP09848 1927 aa20.27■□□□□ 0.84
LRRC28-210ENST00000558879 STRNO43815 780 aa20.27■□□□□ 0.84
LRRC28-210ENST00000558879 ERCC3P19447 782 aa20.27■□□□□ 0.84
LRRC28-210ENST00000558879 CCND3P30281 292 aaPredicted RBP20.27■□□□□ 0.84
LRRC28-210ENST00000558879 TMEM132BQ14DG7 1078 aa20.27■□□□□ 0.84
LRRC28-210ENST00000558879 FAM83BQ5T0W9 1011 aa20.27■□□□□ 0.84
LRRC28-210ENST00000558879 REPS2Q8NFH8 660 aa20.27■□□□□ 0.84
LRRC28-210ENST00000558879 DIS3LQ8TF46 1054 aaKnown RBP20.27■□□□□ 0.84
LRRC28-210ENST00000558879 CEP95Q96GE4 821 aa20.27■□□□□ 0.84
LRRC28-210ENST00000558879 OSBPL3Q9H4L5 887 aa20.27■□□□□ 0.84
LRRC28-210ENST00000558879 HELLSQ9NRZ9 838 aa20.27■□□□□ 0.84
LRRC28-210ENST00000558879 ZNF214Q9UL59 606 aaPredicted RBP20.27■□□□□ 0.84
LRRC28-210ENST00000558879 ZMYM6O95789 1325 aa20.27■□□□□ 0.83
LRRC28-210ENST00000558879 A0A0D9SFI3 127 aa20.26■□□□□ 0.83
LRRC28-210ENST00000558879 NDUFB10O96000 172 aa20.26■□□□□ 0.83
LRRC28-210ENST00000558879 ADORA2AP29274 412 aa20.26■□□□□ 0.83
LRRC28-210ENST00000558879 NUCB1Q02818 461 aa20.26■□□□□ 0.83
LRRC28-210ENST00000558879 PDE4BQ07343 736 aa20.26■□□□□ 0.83
LRRC28-210ENST00000558879 VPS53Q5VIR6 699 aa20.26■□□□□ 0.83
LRRC28-210ENST00000558879 CHD1LQ86WJ1 897 aa20.26■□□□□ 0.83
LRRC28-210ENST00000558879 ZNF444Q8N0Y2 327 aaPredicted RBP20.26■□□□□ 0.83
LRRC28-210ENST00000558879 NEDD1Q8NHV4 660 aa20.26■□□□□ 0.83
LRRC28-210ENST00000558879 MKL1Q969V6 931 aa20.26■□□□□ 0.83
LRRC28-210ENST00000558879 MROH8Q9H579 483 aa20.26■□□□□ 0.83
LRRC28-210ENST00000558879 MTMR4Q9NYA4 1195 aa20.26■□□□□ 0.83
LRRC28-210ENST00000558879 LRRC37A2A6NM11 1700 aa20.25■□□□□ 0.83
LRRC28-210ENST00000558879 F5H6K3 240 aa20.25■□□□□ 0.83
LRRC28-210ENST00000558879 H0YGN5 161 aa20.25■□□□□ 0.83
LRRC28-210ENST00000558879 VWA5AO00534 786 aa20.25■□□□□ 0.83
LRRC28-210ENST00000558879 KLRC3Q07444 240 aa20.25■□□□□ 0.83
LRRC28-210ENST00000558879 PLEKHM2Q8IWE5 1019 aa20.25■□□□□ 0.83
LRRC28-210ENST00000558879 ABRAQ8N0Z2 381 aa20.25■□□□□ 0.83
LRRC28-210ENST00000558879 PAWRQ96IZ0 340 aaKnown RBP20.25■□□□□ 0.83
LRRC28-210ENST00000558879 FAM227BQ96M60 508 aa20.25■□□□□ 0.83
LRRC28-210ENST00000558879 ANAPC4Q9UJX5 808 aa20.25■□□□□ 0.83
LRRC28-210ENST00000558879 SLC25A27O95847 323 aa20.24■□□□□ 0.83
LRRC28-210ENST00000558879 TTLL1O95922 423 aa20.24■□□□□ 0.83
LRRC28-210ENST00000558879 PLS1Q14651 629 aa20.24■□□□□ 0.83
LRRC28-210ENST00000558879 ALX1Q15699 326 aa20.24■□□□□ 0.83
LRRC28-210ENST00000558879 OLFML2BQ68BL8 750 aa20.24■□□□□ 0.83
LRRC28-210ENST00000558879 LHX8Q68G74 356 aa20.24■□□□□ 0.83
LRRC28-210ENST00000558879 RIOX2Q8IUF8 465 aa20.24■□□□□ 0.83
LRRC28-210ENST00000558879 GMCL1P1Q8NEA9 526 aa20.24■□□□□ 0.83
LRRC28-210ENST00000558879 NUP88Q99567 741 aaPredicted RBP20.24■□□□□ 0.83
LRRC28-210ENST00000558879 CLIP2Q9UDT6 1046 aa20.24■□□□□ 0.83
LRRC28-210ENST00000558879 TRIOBPQ9H2D6 2365 aa20.24■□□□□ 0.83
LRRC28-210ENST00000558879 SLC3A2P08195 630 aaKnown RBP20.23■□□□□ 0.83
LRRC28-210ENST00000558879 TSPY3P0CV98 308 aa20.23■□□□□ 0.83
LRRC28-210ENST00000558879 TSPY8P0CW00 308 aa20.23■□□□□ 0.83
LRRC28-210ENST00000558879 CYBAP13498 195 aa20.23■□□□□ 0.83
LRRC28-210ENST00000558879 MFSD14CQ5VZR4 134 aa20.23■□□□□ 0.83
LRRC28-210ENST00000558879 B4GALNT3Q6L9W6 998 aa20.23■□□□□ 0.83
LRRC28-210ENST00000558879 NECAB2Q7Z6G3 386 aa20.23■□□□□ 0.83
LRRC28-210ENST00000558879 ZNF589Q86UQ0 364 aaPredicted RBP20.23■□□□□ 0.83
LRRC28-210ENST00000558879 NCAPG2Q86XI2 1143 aa20.23■□□□□ 0.83
LRRC28-210ENST00000558879 DPF3Q92784 378 aa20.23■□□□□ 0.83
LRRC28-210ENST00000558879 SLF1Q9BQI6 1058 aa20.23■□□□□ 0.83
LRRC28-210ENST00000558879 TACC3Q9Y6A5 838 aa20.23■□□□□ 0.83
LRRC28-210ENST00000558879 MYH6P13533 1939 aa20.22■□□□□ 0.83
LRRC28-210ENST00000558879 RAD21O60216 631 aa20.22■□□□□ 0.83
LRRC28-210ENST00000558879 COBLO75128 1261 aa20.22■□□□□ 0.83
LRRC28-210ENST00000558879 NMIQ13287 307 aaPredicted RBP20.22■□□□□ 0.83
LRRC28-210ENST00000558879 MCMDC2Q4G0Z9 681 aa20.22■□□□□ 0.83
LRRC28-210ENST00000558879 FAM47AQ5JRC9 791 aa20.22■□□□□ 0.83
LRRC28-210ENST00000558879 HABP4Q5JVS0 413 aaKnown RBP20.22■□□□□ 0.83
LRRC28-210ENST00000558879 SAMD1Q6SPF0 538 aaPredicted RBP20.22■□□□□ 0.83
LRRC28-210ENST00000558879 LRRC47Q8N1G4 583 aaKnown RBP20.22■□□□□ 0.83
LRRC28-210ENST00000558879 SUPT16HQ9Y5B9 1047 aaKnown RBP20.22■□□□□ 0.83
LRRC28-210ENST00000558879 LTBP2Q14767 1821 aa20.22■□□□□ 0.83
LRRC28-210ENST00000558879 CCDC171Q6TFL3 1326 aa20.22■□□□□ 0.83
LRRC28-210ENST00000558879 FGRP09769 529 aa20.21■□□□□ 0.83
LRRC28-210ENST00000558879 CYP2C19P33261 490 aa20.21■□□□□ 0.83
LRRC28-210ENST00000558879 COPB2P35606 906 aa20.21■□□□□ 0.83
LRRC28-210ENST00000558879 TFAP4Q01664 338 aa20.21■□□□□ 0.83
LRRC28-210ENST00000558879 CTDSPL2Q05D32 466 aa20.21■□□□□ 0.83
LRRC28-210ENST00000558879 DPP9Q86TI2 863 aa20.21■□□□□ 0.83
LRRC28-210ENST00000558879 TRPV1Q8NER1 839 aa20.21■□□□□ 0.83
LRRC28-210ENST00000558879 NBPF3Q9H094 633 aa20.21■□□□□ 0.83
LRRC28-210ENST00000558879 PFASO15067 1338 aa20.21■□□□□ 0.83
LRRC28-210ENST00000558879 TRIM6-TRIM34B2RNG4 842 aa20.2■□□□□ 0.82
LRRC28-210ENST00000558879 ATP2A1O14983 1001 aa20.2■□□□□ 0.82
LRRC28-210ENST00000558879 ORC4O43929 436 aa20.2■□□□□ 0.82
LRRC28-210ENST00000558879 HSPD1P10809 573 aaKnown RBP20.2■□□□□ 0.82
LRRC28-210ENST00000558879 COL6A1P12109 1028 aa20.2■□□□□ 0.82
LRRC28-210ENST00000558879 STAT3P40763 770 aa20.2■□□□□ 0.82
LRRC28-210ENST00000558879 NOVP48745 357 aa20.2■□□□□ 0.82
LRRC28-210ENST00000558879 MAML3Q96JK9 1138 aa20.2■□□□□ 0.82
LRRC28-210ENST00000558879 COLQQ9Y215 455 aaPredicted RBP20.2■□□□□ 0.82
LRRC28-210ENST00000558879 MSCO60682 206 aa20.19■□□□□ 0.82
LRRC28-210ENST00000558879 FCER1AP12319 257 aa20.19■□□□□ 0.82
LRRC28-210ENST00000558879 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms