RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, human

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPM1-208	ENST00000558768		A0A1W2PQD8	194 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	TRPA1	O75762	1119 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	METAP2	P50579	478 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	ACTN3	Q08043	901 aa	Predicted RBP	10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	TEKT1	Q969V4	418 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	PGBD1	Q96JS3	809 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	LRRC2	Q9BYS8	371 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	ANKRD65	E5RJM6	399 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	MARCKS	P29966	332 aa	Predicted RBP	10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	MFSD4B	Q5TF39	518 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	CCDC80	Q76M96	950 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	CCDC125	Q86Z20	511 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	UBL4B	Q8N7F7	174 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	NUDT16	Q96DE0	195 aa	Known RBP	10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	HAUS4	Q9H6D7	363 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	TRH	P20396	242 aa	Predicted RBP	10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	GUCY2F	P51841	1108 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	MTX1	Q13505	466 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	TBC1D1	Q86TI0	1168 aa	Predicted RBP	10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	DDX28	Q9NUL7	540 aa	Known RBP	10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	INTU	Q9ULD6	942 aa		10.63	□□□□□ -0.71
TRPM1-208	ENST00000558768	CPSF1	Q10570	1443 aa	Known RBP	10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	IQCA1L	A6NCM1	817 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	KRT10	P13645	584 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	USP5	P45974	858 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	CTAGE3P	Q8IX95	158 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	CARD10	Q9BWT7	1032 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	WWC3	Q9ULE0	1092 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	CTNND1	O60716	968 aa	Known RBP	10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	EPHB4	P54760	987 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	ASIC1	P78348	528 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	REST	Q13127	1097 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	SNX1	Q13596	522 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	SYCP3	Q8IZU3	236 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	ALG1	Q9BT22	464 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	ANLN	Q9NQW6	1124 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	EPS15L1	Q9UBC2	864 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	ASXL2	Q76L83	1435 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	TRIM75P	A6NK02	468 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	IDH1	O75874	414 aa	Known RBP	10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	IL9R	Q01113	521 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	GEN1	Q17RS7	908 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	KCTD16	Q68DU8	428 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	APLF	Q8IW19	511 aa	Predicted RBP	10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	IQUB	Q8NA54	791 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	PIP4K2C	Q8TBX8	421 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	LRRC8C	Q8TDW0	803 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	MAP4K1	Q92918	833 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	C10orf88	Q9H8K7	445 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	KLC4	Q9NSK0	619 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	FBXO2	Q9UK22	296 aa	Predicted RBP	10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	HYOU1	Q9Y4L1	999 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	SAMD9L	Q8IVG5	1584 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	SPOP	O43791	374 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	KRT8	P05787	483 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	RNASE9	P60153	205 aa	Known RBP	10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	ITIH3	Q06033	890 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	RBM43	Q6ZSC3	357 aa	Known RBP	10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	CATIP	Q7Z7H3	387 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	SYCE1	Q8N0S2	351 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	DHX58	Q96C10	678 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	ZNF653	Q96CK0	615 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	RUNDC3B	Q96NL0	473 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	PRDM16	Q9HAZ2	1276 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	ZRANB1	Q9UGI0	708 aa		10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.62	□□□□□ -0.71
TRPM1-208	ENST00000558768	PI4KAP2	A4QPH2	592 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	DAB1	O75553	588 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	LMNB1	P20700	586 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	PPARD	Q03181	441 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	EIF4A2	Q14240	407 aa	Known RBP	10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	PI4KAP1	Q8N8J0	262 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	PPP4R1	Q8TF05	950 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	OSBPL1A	Q9BXW6	950 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	POTEB3	A0JP26	581 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	TMEM110-MUSTN1	A8MSY1	372 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	ATP5H	O75947	161 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	SNUPN	O95149	360 aa	Known RBP	10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	APOA1	P02647	267 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	CYLC2	Q14093	348 aa	Predicted RBP	10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	CASP8	Q14790	479 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	DPCR1	Q3MIW9	517 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	ALS2CL	Q60I27	953 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	POTEB	Q6S5H4	581 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	PARP9	Q8IXQ6	854 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	HIC2	Q96JB3	615 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	SLF1	Q9BQI6	1058 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	FAM167B	Q9BTA0	163 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	PARVB	Q9HBI1	364 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	POLE3	Q9NRF9	147 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	IQGAP1	P46940	1657 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	CDC42BPA	Q5VT25	1732 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	TBCA	O75347	108 aa	Known RBP	10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	TBC1D8	O95759	1140 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	TTC4	O95801	387 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	CCDC15	Q0P6D6	951 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	MCMDC2	Q4G0Z9	681 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	WDR75	Q8IWA0	830 aa	Known RBP	10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	FAM227B	Q96M60	508 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms