RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 MYCBPAPQ8TBZ2 947 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 PAGE5Q96GU1 130 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 TMEM87BQ96K49 555 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 CCT8L2Q96SF2 557 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 TSGA10Q9BZW7 698 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 STRN4Q9NRL3 753 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 NID2Q14112 1375 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 ZBTB43O43298 467 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 NEBLO76041 1014 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
PCAT29-201ENST00000558411 IDEP14735 1019 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 CDC25AP30304 524 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 SSRP1Q08945 709 aaKnown RBP12.54□□□□□ -0.4
PCAT29-201ENST00000558411 GLE1Q53GS7 698 aaKnown RBP12.54□□□□□ -0.4
PCAT29-201ENST00000558411 CYB5D1Q6P9G0 228 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 MPRIPQ6WCQ1 1025 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 CREG2Q8IUH2 290 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 CCDC170Q8IYT3 715 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 MREGQ8N565 214 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 TSEN2Q8NCE0 465 aaKnown RBP12.54□□□□□ -0.4
PCAT29-201ENST00000558411 IP6K1Q92551 441 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 PHKBQ93100 1093 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 SGSM3Q96HU1 749 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 RNPC3Q96LT9 517 aaKnown RBP12.54□□□□□ -0.4
PCAT29-201ENST00000558411 NEUROD6Q96NK8 337 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 STIM2Q9P246 746 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 DDX20Q9UHI6 824 aaKnown RBP12.54□□□□□ -0.4
PCAT29-201ENST00000558411 CAPN11Q9UMQ6 739 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 SNX12Q9UMY4 172 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 CTNND2Q9UQB3 1225 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 LUC7L2Q9Y383 392 aaKnown RBP12.54□□□□□ -0.4
PCAT29-201ENST00000558411 UBR1Q8IWV7 1749 aa12.54□□□□□ -0.4
PCAT29-201ENST00000558411 PHRF1Q9P1Y6 1649 aaKnown RBP12.54□□□□□ -0.4
PCAT29-201ENST00000558411 MYH7P12883 1935 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 PRAMEF22A3QJZ6 481 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 KCNJ18B7U540 433 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 RANBP6O60518 1105 aaKnown RBP12.53□□□□□ -0.4
PCAT29-201ENST00000558411 MDH1P40925 334 aaKnown RBP12.53□□□□□ -0.4
PCAT29-201ENST00000558411 IL15P40933 162 aaPredicted RBP12.53□□□□□ -0.4
PCAT29-201ENST00000558411 KCNJ12Q14500 433 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 PPP4R3AQ6IN85 833 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 CCDC121Q6ZUS5 278 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 SGMS1Q86VZ5 419 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 IQCKQ8N0W5 287 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 P3H4Q92791 437 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 ZIM3Q96PE6 472 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 LRRC1Q9BTT6 524 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 CSRNP2Q9H175 543 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 VPS16Q9H269 839 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 C5P01031 1676 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 ABCC12Q96J65 1359 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 LAMB4A4D0S4 1761 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 TTC26A0AVF1 554 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 HMGB1P1B2RPK0 211 aaPredicted RBP12.53□□□□□ -0.4
PCAT29-201ENST00000558411 ZNF185O15231 689 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 IPO7O95373 1038 aaKnown RBP12.53□□□□□ -0.4
PCAT29-201ENST00000558411 NR1D1P20393 614 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 PAX7P23759 505 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 C1orf141Q5JVX7 400 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 RCSD1Q6JBY9 416 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 ATG9AQ7Z3C6 839 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 DIS3L2Q8IYB7 885 aaKnown RBP12.53□□□□□ -0.4
PCAT29-201ENST00000558411 FUKQ8N0W3 1084 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 APPBP2Q92624 585 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 CCDC114Q96M63 670 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 JADE2Q9NQC1 790 aa12.53□□□□□ -0.4
PCAT29-201ENST00000558411 DMGDHQ9UI17 866 aaKnown RBP12.53□□□□□ -0.4
PCAT29-201ENST00000558411 GOLGA8AA7E2F4 631 aa12.52□□□□□ -0.4
PCAT29-201ENST00000558411 BTBD18B2RXH4 712 aa12.52□□□□□ -0.4
PCAT29-201ENST00000558411 CLNS1AP54105 237 aaKnown RBP12.52□□□□□ -0.4
PCAT29-201ENST00000558411 UBXN1Q04323 297 aa12.52□□□□□ -0.4
PCAT29-201ENST00000558411 WDR59Q6PJI9 974 aa12.52□□□□□ -0.4
PCAT29-201ENST00000558411 MAB21L3Q8N8X9 362 aa12.52□□□□□ -0.4
PCAT29-201ENST00000558411 SPATA4Q8NEY3 305 aa12.52□□□□□ -0.4
PCAT29-201ENST00000558411 TRIM58Q8NG06 486 aa12.52□□□□□ -0.4
PCAT29-201ENST00000558411 FAM217BQ9NTX9 383 aaPredicted RBP12.52□□□□□ -0.4
PCAT29-201ENST00000558411 TAB2Q9NYJ8 693 aa12.52□□□□□ -0.4
PCAT29-201ENST00000558411 ARFGEF2Q9Y6D5 1785 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 PXDNQ92626 1479 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 TMEM2Q9UHN6 1383 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 IFNAR1P17181 557 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 TCP1P17987 556 aaKnown RBP12.52□□□□□ -0.41
PCAT29-201ENST00000558411 ATP1A2P50993 1020 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 VAV2P52735 878 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 GRIK3Q13003 919 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 IFT88Q13099 833 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 PAK1Q13153 545 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 NBPF9Q3BBW0 867 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 CFAP58Q5T655 872 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 ARFGAP2Q8N6H7 521 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 MB21D1Q8N884 522 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 XAGE3Q8WTP9 111 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 BATF3Q9NR55 127 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 PCDHB6Q9Y5E3 794 aa12.52□□□□□ -0.41
PCAT29-201ENST00000558411 MYH13Q9UKX3 1938 aa12.51□□□□□ -0.41
PCAT29-201ENST00000558411 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
PCAT29-201ENST00000558411 AFMP43652 599 aa12.51□□□□□ -0.41
PCAT29-201ENST00000558411 CASP7P55210 303 aa12.51□□□□□ -0.41
PCAT29-201ENST00000558411 HDLBPQ00341 1268 aaKnown RBP12.51□□□□□ -0.41
PCAT29-201ENST00000558411 CDK17Q00537 523 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms