RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 SAP30BPQ9UHR5 308 aaKnown RBP9.28□□□□□ -0.92
RTF1-205ENST00000558298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.28□□□□□ -0.92
RTF1-205ENST00000558298 V9GYY5 206 aaPredicted RBP9.28□□□□□ -0.92
RTF1-205ENST00000558298 IGKV6D-41A0A0C4DH26 115 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 SGSM2O43147 1006 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 ORC4O43929 436 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 KDM4AO75164 1064 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 SLC3A2P08195 630 aaKnown RBP9.27□□□□□ -0.93
RTF1-205ENST00000558298 HOXA7P31268 230 aaPredicted RBP9.27□□□□□ -0.93
RTF1-205ENST00000558298 GUCY1A2P33402 732 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 TDO2P48775 406 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 CDK8P49336 464 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 USP14P54578 494 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 BACE1P56817 501 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 IRX3P78415 501 aaPredicted RBP9.27□□□□□ -0.93
RTF1-205ENST00000558298 PPARAQ07869 468 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 CUL4AQ13619 759 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 TAF1CQ15572 869 aaPredicted RBP9.27□□□□□ -0.93
RTF1-205ENST00000558298 PKN2Q16513 984 aaKnown RBP9.27□□□□□ -0.93
RTF1-205ENST00000558298 ABCB5Q2M3G0 1257 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 SHROOM1Q2M3G4 852 aaPredicted RBP9.27□□□□□ -0.93
RTF1-205ENST00000558298 C17orf99Q6UX52 265 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 CCDC84Q86UT8 332 aaPredicted RBP9.27□□□□□ -0.93
RTF1-205ENST00000558298 GOLGA6L1Q8N7Z2 621 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 CCDC112Q8NEF3 446 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 TMEM63CQ9P1W3 806 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 AGTPBP1Q9UPW5 1226 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 ZHX2Q9Y6X8 837 aa9.27□□□□□ -0.93
RTF1-205ENST00000558298 ATP8B1O43520 1251 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 GH2P01242 217 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 FGAP02671 866 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 TPM1P09493 284 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 CYP2D6P10635 497 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 BCRP11274 1271 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 RASA1P20936 1047 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 CTGFP29279 349 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 RGS19P49795 217 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 UBE2HP62256 183 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 EVX2Q03828 476 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 PDE4BQ07343 736 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 TERF2Q15554 542 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 VPS53Q5VIR6 699 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 FBXO46Q6PJ61 603 aaPredicted RBP9.26□□□□□ -0.93
RTF1-205ENST00000558298 LBX2Q6XYB7 198 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 OTOP1Q7RTM1 612 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 TXLNBQ8N3L3 684 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 GTF3C2Q8WUA4 911 aaPredicted RBP9.26□□□□□ -0.93
RTF1-205ENST00000558298 LPAR1Q92633 364 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 USP26Q9BXU7 913 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 SH2D4AQ9H788 454 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 KANSL2Q9H9L4 492 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 ZFYVE28Q9HCC9 887 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 CABP5Q9NP86 173 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 CTNNA3Q9UI47 895 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 PNMA3Q9UL41 463 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.26□□□□□ -0.93
RTF1-205ENST00000558298 TNRC18O15417 2968 aaPredicted RBP9.26□□□□□ -0.93
RTF1-205ENST00000558298 MYPNQ86TC9 1320 aa9.26□□□□□ -0.93
RTF1-205ENST00000558298 USP17L10C9JJH3 530 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 TULP2O00295 520 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 PDHXO00330 501 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 NRDCO43847 1150 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 ADCY5O95622 1261 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 TPM4P67936 248 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 SP3Q02447 781 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 PABPC4Q13310 644 aaKnown RBP eCLIP9.25□□□□□ -0.93
RTF1-205ENST00000558298 BMS1Q14692 1282 aaKnown RBP9.25□□□□□ -0.93
RTF1-205ENST00000558298 CWC27Q6UX04 472 aaKnown RBP9.25□□□□□ -0.93
RTF1-205ENST00000558298 CCDC129Q6ZRS4 1044 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 SLC44A5Q8NCS7 719 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 NEDD1Q8NHV4 660 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 CD99L2Q8TCZ2 262 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 STAG1Q8WVM7 1258 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 MKL1Q969V6 931 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 ERO1AQ96HE7 468 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 PARK7Q99497 189 aaKnown RBP9.25□□□□□ -0.93
RTF1-205ENST00000558298 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.25□□□□□ -0.93
RTF1-205ENST00000558298 IL25Q9H293 177 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 RNF41Q9H4P4 317 aaPredicted RBP9.25□□□□□ -0.93
RTF1-205ENST00000558298 TCP11L1Q9NUJ3 509 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 ARGLU1Q9NWB6 273 aaPredicted RBP9.25□□□□□ -0.93
RTF1-205ENST00000558298 NYAP2Q9P242 653 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 HPS5Q9UPZ3 1129 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 TMX2Q9Y320 296 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 ZNF236Q9UL36 1845 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 ELP1O95163 1332 aa9.25□□□□□ -0.93
RTF1-205ENST00000558298 PLXNB2O15031 1838 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 CYP2D7A0A087X1C5 515 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 GDF11O95390 407 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 APPP05067 770 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 CCDC192P0DO97 292 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 AKR1B1P15121 316 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 LACTBP83111 547 aaPredicted RBP9.24□□□□□ -0.93
RTF1-205ENST00000558298 ICA1Q05084 483 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 SPP2Q13103 211 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 TREML2Q5T2D2 321 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 USP17L2Q6R6M4 530 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 TEX2Q8IWB9 1127 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 DYNLL2Q96FJ2 89 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 GEMIN8Q9NWZ8 242 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms