RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 KIAA1755Q5JYT7 1200 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 TREML2Q5T2D2 321 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 NFXL1Q6ZNB6 911 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 SPICE1Q8N0Z3 855 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 FAM43AQ8N2R8 423 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 MAP3K14Q99558 947 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 BEGAINQ9BUH8 593 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 LRRC2Q9BYS8 371 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 AGXT2Q9BYV1 514 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 RPAP3Q9H6T3 665 aaPredicted RBP12.25□□□□□ -0.45
LRRC28-204ENST00000558172 PDRG1Q9NUG6 133 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 HOXC10Q9NYD6 342 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 CA12O43570 354 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 PLA2G6O60733 806 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 DDAH1O94760 285 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 PDHBP11177 359 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 COL11A1P12107 1806 aaPredicted RBP12.24□□□□□ -0.45
LRRC28-204ENST00000558172 IRX3P78415 501 aaPredicted RBP12.24□□□□□ -0.45
LRRC28-204ENST00000558172 COG2Q14746 738 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 TAF1CQ15572 869 aaPredicted RBP12.24□□□□□ -0.45
LRRC28-204ENST00000558172 FAM83BQ5T0W9 1011 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 GPATCH4Q5T3I0 446 aaKnown RBP12.24□□□□□ -0.45
LRRC28-204ENST00000558172 MYPNQ86TC9 1320 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 ZNF654Q8IZM8 581 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 JMYQ8N9B5 988 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 GTF3C2Q8WUA4 911 aaPredicted RBP12.24□□□□□ -0.45
LRRC28-204ENST00000558172 CHURC1Q8WUH1 139 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 TCEANC2Q96MN5 208 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 PARK7Q99497 189 aaKnown RBP12.24□□□□□ -0.45
LRRC28-204ENST00000558172 CFHR5Q9BXR6 569 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 UPF3BQ9BZI7 483 aaKnown RBP12.24□□□□□ -0.45
LRRC28-204ENST00000558172 TANGO6Q9C0B7 1094 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 ZFYVE28Q9HCC9 887 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 SAGE1Q9NXZ1 904 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 FEM1BQ9UK73 627 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 SLC12A7Q9Y666 1083 aa12.24□□□□□ -0.45
LRRC28-204ENST00000558172 BAZ2BQ9UIF8 2168 aaKnown RBP12.23□□□□□ -0.45
LRRC28-204ENST00000558172 PARP1P09874 1014 aaKnown RBP12.23□□□□□ -0.45
LRRC28-204ENST00000558172 FDX1P10109 184 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 NEK4P51957 841 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 RCAN1P53805 252 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 EVCP57679 992 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 TROAPQ12815 778 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 PPP2R5BQ15173 497 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 RABEP1Q15276 862 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 ASPRV1Q53RT3 343 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 FAM160B2Q86V87 743 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 PRPF38AQ8NAV1 312 aaKnown RBP12.23□□□□□ -0.45
LRRC28-204ENST00000558172 BRF1Q92994 677 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 KIF2CQ99661 725 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 ASCC2Q9H1I8 757 aaPredicted RBP12.23□□□□□ -0.45
LRRC28-204ENST00000558172 SENP2Q9HC62 589 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 GPHNQ9NQX3 736 aaPredicted RBP12.23□□□□□ -0.45
LRRC28-204ENST00000558172 RNF186Q9NXI6 227 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 MTMR7Q9Y216 660 aa12.23□□□□□ -0.45
LRRC28-204ENST00000558172 TMEM232C9JQI7 657 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 ZBTB43O43298 467 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 FLOT1O75955 427 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 DSG3P32926 999 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 KIF5BP33176 963 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 GCLCP48506 637 aaPredicted RBP12.22□□□□□ -0.45
LRRC28-204ENST00000558172 STAT2P52630 851 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 ZNF543Q08ER8 600 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 GRM4Q14833 912 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 CCDC96Q2M329 555 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 BTNL9Q6UXG8 535 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 LBX2Q6XYB7 198 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 KCTD1Q719H9 257 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
LRRC28-204ENST00000558172 SMCR8Q8TEV9 937 aaPredicted RBP12.22□□□□□ -0.45
LRRC28-204ENST00000558172 NUP133Q8WUM0 1156 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 NUP88Q99567 741 aaPredicted RBP12.22□□□□□ -0.45
LRRC28-204ENST00000558172 P2RX7Q99572 595 aaKnown RBP12.22□□□□□ -0.45
LRRC28-204ENST00000558172 SLF1Q9BQI6 1058 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
LRRC28-204ENST00000558172 ISY1Q9ULR0 285 aaKnown RBP12.22□□□□□ -0.45
LRRC28-204ENST00000558172 KLF18A0A0U1RQI7 1052 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 PALM3A6NDB9 673 aaPredicted RBP12.21□□□□□ -0.45
LRRC28-204ENST00000558172 TLR2O60603 784 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 TRPA1O75762 1119 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 CYP2C8P10632 490 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 SMARCA1P28370 1054 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 GNAQP50148 359 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 HERVK_113P62684 666 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 APOBRQ0VD83 1088 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 IKQ13123 557 aaPredicted RBP12.21□□□□□ -0.45
LRRC28-204ENST00000558172 TOB2Q14106 344 aaPredicted RBP12.21□□□□□ -0.45
LRRC28-204ENST00000558172 APOA5Q6Q788 366 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 MB21D1Q8N884 522 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 ZNF274Q96GC6 653 aaPredicted RBP12.21□□□□□ -0.45
LRRC28-204ENST00000558172 LZTS2Q9BRK4 669 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 RBM28Q9NW13 759 aaKnown RBP12.21□□□□□ -0.45
LRRC28-204ENST00000558172 MAD2L2Q9UI95 211 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 BRPF3Q9ULD4 1205 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 PPP1R9AQ9ULJ8 1098 aa12.21□□□□□ -0.45
LRRC28-204ENST00000558172 A0A0G2JMZ2 1700 aa12.2□□□□□ -0.46
LRRC28-204ENST00000558172 FRMPD2Q68DX3 1309 aaPredicted RBP12.2□□□□□ -0.46
LRRC28-204ENST00000558172 CCDC196A0A1B0GTZ2 297 aa12.2□□□□□ -0.46
LRRC28-204ENST00000558172 ST18O60284 1047 aa12.2□□□□□ -0.46
LRRC28-204ENST00000558172 AK2P54819 239 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms