RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 CILP2Q8IUL8 1156 aa5.09□□□□□ -1.59
GPHN-216ENST00000557678 SIAH1Q8IUQ4 282 aa5.09□□□□□ -1.59
GPHN-216ENST00000557678 INTS4Q96HW7 963 aaKnown RBP5.09□□□□□ -1.59
GPHN-216ENST00000557678 BCL2L13Q9BXK5 485 aa5.09□□□□□ -1.59
GPHN-216ENST00000557678 FOXP3Q9BZS1 431 aa5.09□□□□□ -1.59
GPHN-216ENST00000557678 CD320Q9NPF0 282 aa5.09□□□□□ -1.59
GPHN-216ENST00000557678 GGT7Q9UJ14 662 aa5.09□□□□□ -1.59
GPHN-216ENST00000557678 MEIS1O00470 390 aa5.08□□□□□ -1.6
GPHN-216ENST00000557678 USP2O75604 605 aaPredicted RBP5.08□□□□□ -1.6
GPHN-216ENST00000557678 POLR2BP30876 1174 aaKnown RBP5.08□□□□□ -1.6
GPHN-216ENST00000557678 LINC00310P59036 64 aa5.08□□□□□ -1.6
GPHN-216ENST00000557678 SNX17Q15036 470 aa5.08□□□□□ -1.6
GPHN-216ENST00000557678 NR0B2Q15466 257 aa5.08□□□□□ -1.6
GPHN-216ENST00000557678 SEZ6Q53EL9 994 aa5.08□□□□□ -1.6
GPHN-216ENST00000557678 RNF111Q6ZNA4 994 aa5.08□□□□□ -1.6
GPHN-216ENST00000557678 GK5Q6ZS86 529 aa5.08□□□□□ -1.6
GPHN-216ENST00000557678 ZNF512BQ96KM6 892 aaPredicted RBP5.08□□□□□ -1.6
GPHN-216ENST00000557678 MCOLN1Q9GZU1 580 aa5.08□□□□□ -1.6
GPHN-216ENST00000557678 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.08□□□□□ -1.6
GPHN-216ENST00000557678 SP110Q9HB58 689 aa5.08□□□□□ -1.6
GPHN-216ENST00000557678 GMIPQ9P107 970 aa5.08□□□□□ -1.6
GPHN-216ENST00000557678 TCFL5Q9UL49 500 aa5.08□□□□□ -1.6
GPHN-216ENST00000557678 YBX2Q9Y2T7 364 aaKnown RBP5.08□□□□□ -1.6
GPHN-216ENST00000557678 ROBO2Q9HCK4 1378 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 CLEC3AO75596 197 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 UBOX5O94941 541 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 SYPP08247 313 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 MED14OSP0DP75 135 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 GARTP22102 1010 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 DLG4P78352 724 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 ZNF326Q5BKZ1 582 aaKnown RBP5.07□□□□□ -1.6
GPHN-216ENST00000557678 OVOS1Q6IE37 1185 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 CEP128Q6ZU80 1094 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 HS2ST1Q7LGA3 356 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 TMC3Q7Z5M5 1100 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 ENOX1Q8TC92 643 aaKnown RBP5.07□□□□□ -1.6
GPHN-216ENST00000557678 SYTL5Q8TDW5 730 aaPredicted RBP5.07□□□□□ -1.6
GPHN-216ENST00000557678 GIPC2Q8TF65 315 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 ZNF296Q8WUU4 475 aaPredicted RBP5.07□□□□□ -1.6
GPHN-216ENST00000557678 TCTN2Q96GX1 697 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 SGPP1Q9BX95 441 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 MKRN2Q9H000 416 aaKnown RBP5.07□□□□□ -1.6
GPHN-216ENST00000557678 EBF1Q9UH73 591 aa5.07□□□□□ -1.6
GPHN-216ENST00000557678 CNOT6Q9ULM6 557 aaKnown RBP5.07□□□□□ -1.6
GPHN-216ENST00000557678 OR14I1A6ND48 311 aa5.06□□□□□ -1.6
GPHN-216ENST00000557678 RAD51AP2Q09MP3 1159 aa5.06□□□□□ -1.6
GPHN-216ENST00000557678 APOBRQ0VD83 1088 aa5.06□□□□□ -1.6
GPHN-216ENST00000557678 LILRA6Q6PI73 481 aa5.06□□□□□ -1.6
GPHN-216ENST00000557678 ERMP1Q7Z2K6 904 aa5.06□□□□□ -1.6
GPHN-216ENST00000557678 USHBP1Q8N6Y0 703 aa5.06□□□□□ -1.6
GPHN-216ENST00000557678 ZNF655Q8N720 491 aaPredicted RBP5.06□□□□□ -1.6
GPHN-216ENST00000557678 HDAC8Q9BY41 377 aa5.06□□□□□ -1.6
GPHN-216ENST00000557678 FBXL21Q9UKT6 434 aa5.06□□□□□ -1.6
GPHN-216ENST00000557678 MYOCOSA0A1B0GUC4 107 aa5.05□□□□□ -1.6
GPHN-216ENST00000557678 FAM86C2PA6NEL3 165 aa5.05□□□□□ -1.6
GPHN-216ENST00000557678 SEMA7AO75326 666 aa5.05□□□□□ -1.6
GPHN-216ENST00000557678 PRAMEF1O95521 474 aa5.05□□□□□ -1.6
GPHN-216ENST00000557678 INHBBP09529 407 aa5.05□□□□□ -1.6
GPHN-216ENST00000557678 SNW1Q13573 536 aaKnown RBP5.05□□□□□ -1.6
GPHN-216ENST00000557678 NBPF9Q3BBW0 867 aa5.05□□□□□ -1.6
GPHN-216ENST00000557678 NBPF12Q5TAG4 269 aaPredicted RBP5.05□□□□□ -1.6
GPHN-216ENST00000557678 NLRC3Q7RTR2 1065 aa5.05□□□□□ -1.6
GPHN-216ENST00000557678 DAGLBQ8NCG7 672 aa5.05□□□□□ -1.6
GPHN-216ENST00000557678 LINC01599Q8WXQ3 324 aa5.05□□□□□ -1.6
GPHN-216ENST00000557678 ZNF552Q9H707 407 aaPredicted RBP5.05□□□□□ -1.6
GPHN-216ENST00000557678 SIRT5Q9NXA8 310 aa5.05□□□□□ -1.6
GPHN-216ENST00000557678 UBP1Q9NZI7 540 aa5.05□□□□□ -1.6
GPHN-216ENST00000557678 ADAMTS20P59510 1910 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 TEX51A0A1B0GUA7 166 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 RFXAPO00287 272 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 PEX10O60683 326 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 BMP7P18075 431 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 SDHBP21912 280 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 CRKP46108 304 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 ZNF165P49910 485 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 RTP1P59025 263 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 SRSF3P84103 164 aaKnown RBP5.04□□□□□ -1.6
GPHN-216ENST00000557678 CLCQ05315 142 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 ZPBP2Q6X784 338 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 NKD1Q969G9 470 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 VWCEQ96DN2 955 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 ATG4CQ96DT6 458 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 MAP6Q96JE9 813 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 CDADC1Q9BWV3 514 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 LRRC3Q9BY71 257 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 PRDM14Q9GZV8 571 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 MINPP1Q9UNW1 487 aa5.04□□□□□ -1.6
GPHN-216ENST00000557678 SIGLEC6O43699 453 aa5.03□□□□□ -1.6
GPHN-216ENST00000557678 GREM1O60565 184 aa5.03□□□□□ -1.6
GPHN-216ENST00000557678 ATE1O95260 518 aa5.03□□□□□ -1.6
GPHN-216ENST00000557678 KIR2DL1P43626 348 aaPredicted RBP5.03□□□□□ -1.6
GPHN-216ENST00000557678 KIR2DL2P43627 348 aaPredicted RBP5.03□□□□□ -1.6
GPHN-216ENST00000557678 ZNF385BQ569K4 471 aa5.03□□□□□ -1.6
GPHN-216ENST00000557678 NLRX1Q86UT6 975 aa5.03□□□□□ -1.6
GPHN-216ENST00000557678 AMIGO3Q86WK7 504 aa5.03□□□□□ -1.6
GPHN-216ENST00000557678 TMEM87AQ8NBN3 555 aa5.03□□□□□ -1.6
GPHN-216ENST00000557678 G6PC3Q9BUM1 346 aa5.03□□□□□ -1.6
GPHN-216ENST00000557678 KRTAP9-8Q9BYQ0 159 aa5.03□□□□□ -1.6
GPHN-216ENST00000557678 ZCCHC4Q9H5U6 513 aa5.03□□□□□ -1.6
GPHN-216ENST00000557678 CNNM2Q9H8M5 875 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms