RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 TINF2Q9BSI4 451 aa12.36□□□□□ -0.43
ABCD4-227ENST00000557554 COPRSQ9NQ92 184 aa12.36□□□□□ -0.43
ABCD4-227ENST00000557554 AATFQ9NY61 560 aaKnown RBP eCLIP12.36□□□□□ -0.43
ABCD4-227ENST00000557554 RAI14Q9P0K7 980 aa12.36□□□□□ -0.43
ABCD4-227ENST00000557554 PA2G4Q9UQ80 394 aaKnown RBP12.36□□□□□ -0.43
ABCD4-227ENST00000557554 MROH7Q68CQ1 1323 aa12.36□□□□□ -0.43
ABCD4-227ENST00000557554 A0A0G2JMZ2 1700 aa12.35□□□□□ -0.43
ABCD4-227ENST00000557554 A0A1B0GUL7 405 aa12.35□□□□□ -0.43
ABCD4-227ENST00000557554 EPOPA6NHQ4 379 aa12.35□□□□□ -0.43
ABCD4-227ENST00000557554 CYP2C18P33260 490 aa12.35□□□□□ -0.43
ABCD4-227ENST00000557554 GUCY1A2P33402 732 aa12.35□□□□□ -0.43
ABCD4-227ENST00000557554 ZNF792Q3KQV3 632 aa12.35□□□□□ -0.43
ABCD4-227ENST00000557554 OTOP2Q7RTS6 562 aa12.35□□□□□ -0.43
ABCD4-227ENST00000557554 PPP1R12CQ9BZL4 782 aa12.35□□□□□ -0.43
ABCD4-227ENST00000557554 KCNH6Q9H252 994 aa12.35□□□□□ -0.43
ABCD4-227ENST00000557554 DIS3Q9Y2L1 958 aaKnown RBP12.35□□□□□ -0.43
ABCD4-227ENST00000557554 USP34Q70CQ2 3546 aa12.35□□□□□ -0.43
ABCD4-227ENST00000557554 SYNRGQ9UMZ2 1314 aa12.35□□□□□ -0.43
ABCD4-227ENST00000557554 A0A1W2PRG0 241 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 MYADML2A6NDP7 307 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 ARVCFO00192 962 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 BAG3O95817 575 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 FCER1AP12319 257 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 AKR1A1P14550 325 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 PLCG2P16885 1265 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 CST5P28325 142 aaPredicted RBP12.34□□□□□ -0.43
ABCD4-227ENST00000557554 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
ABCD4-227ENST00000557554 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 KIAA1755Q5JYT7 1200 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 MRPL50Q8N5N7 158 aaKnown RBP12.34□□□□□ -0.43
ABCD4-227ENST00000557554 MB21D1Q8N884 522 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 CDCA7LQ96GN5 454 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 TRIM34Q9BYJ4 488 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 SAP30BPQ9UHR5 308 aaKnown RBP12.34□□□□□ -0.43
ABCD4-227ENST00000557554 ZNF318Q5VUA4 2279 aa12.34□□□□□ -0.43
ABCD4-227ENST00000557554 PGK2P07205 417 aa12.33□□□□□ -0.44
ABCD4-227ENST00000557554 ARID4AP29374 1257 aaPredicted RBP12.33□□□□□ -0.44
ABCD4-227ENST00000557554 DSG3P32926 999 aa12.33□□□□□ -0.44
ABCD4-227ENST00000557554 NCAPG2Q86XI2 1143 aa12.33□□□□□ -0.44
ABCD4-227ENST00000557554 FAM178BQ8IXR5 827 aa12.33□□□□□ -0.44
ABCD4-227ENST00000557554 GLT1D1Q96MS3 346 aa12.33□□□□□ -0.44
ABCD4-227ENST00000557554 MTIF3Q9H2K0 278 aaKnown RBP12.33□□□□□ -0.44
ABCD4-227ENST00000557554 UMODL1Q5DID0 1318 aa12.33□□□□□ -0.44
ABCD4-227ENST00000557554 CTAGE5O15320 804 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 GTPBP6O43824 516 aaPredicted RBP12.32□□□□□ -0.44
ABCD4-227ENST00000557554 LPXNO60711 386 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 DUSP11O75319 330 aaKnown RBP12.32□□□□□ -0.44
ABCD4-227ENST00000557554 SNAI1O95863 264 aaPredicted RBP12.32□□□□□ -0.44
ABCD4-227ENST00000557554 ASGR1P07306 291 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 MCAMP43121 646 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 TFCP2Q12800 502 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 ABCB5Q2M3G0 1257 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 CERKLQ49MI3 558 aaPredicted RBP12.32□□□□□ -0.44
ABCD4-227ENST00000557554 ATF7IPQ6VMQ6 1270 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 GJD3Q8N144 294 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 SLC43A3Q8NBI5 491 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 EHD4Q9H223 541 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 LRP2BPQ9P2M1 347 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 ADAMTS5Q9UNA0 930 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 AKAP2Q9Y2D5 859 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 SLC4A7Q9Y6M7 1214 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 PTPRCP08575 1304 aa12.32□□□□□ -0.44
ABCD4-227ENST00000557554 CFAP54Q96N23 3096 aa12.31□□□□□ -0.44
ABCD4-227ENST00000557554 MYH1P12882 1939 aa12.31□□□□□ -0.44
ABCD4-227ENST00000557554 POTEB3A0JP26 581 aa12.31□□□□□ -0.44
ABCD4-227ENST00000557554 ADCY6O43306 1168 aa12.31□□□□□ -0.44
ABCD4-227ENST00000557554 HLA-DOAP06340 250 aa12.31□□□□□ -0.44
ABCD4-227ENST00000557554 NKX3-2P78367 333 aa12.31□□□□□ -0.44
ABCD4-227ENST00000557554 PLS1Q14651 629 aa12.31□□□□□ -0.44
ABCD4-227ENST00000557554 TMEM132BQ14DG7 1078 aa12.31□□□□□ -0.44
ABCD4-227ENST00000557554 NAA16Q6N069 864 aaPredicted RBP12.31□□□□□ -0.44
ABCD4-227ENST00000557554 POTEBQ6S5H4 581 aa12.31□□□□□ -0.44
ABCD4-227ENST00000557554 CERS4Q9HA82 394 aa12.31□□□□□ -0.44
ABCD4-227ENST00000557554 SERPINB13Q9UIV8 391 aa12.31□□□□□ -0.44
ABCD4-227ENST00000557554 FAM184BQ9ULE4 1060 aa12.31□□□□□ -0.44
ABCD4-227ENST00000557554 PARP14Q460N5 1801 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
ABCD4-227ENST00000557554 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.3□□□□□ -0.44
ABCD4-227ENST00000557554 A0A0U1RQG5 324 aaPredicted RBP12.3□□□□□ -0.44
ABCD4-227ENST00000557554 ARHGEF15O94989 841 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 SLC25A27O95847 323 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 CA3P07451 260 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 ATP2A2P16615 1042 aaKnown RBP12.3□□□□□ -0.44
ABCD4-227ENST00000557554 SHMT1P34896 483 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 SEPT2Q15019 361 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 TMEM67Q5HYA8 995 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 MAMDC4Q6UXC1 1216 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 SIAH1Q8IUQ4 282 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 PCSK9Q8NBP7 692 aaKnown RBP12.3□□□□□ -0.44
ABCD4-227ENST00000557554 ATG4CQ96DT6 458 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 PHOX2BQ99453 314 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 NOL10Q9BSC4 688 aaKnown RBP12.3□□□□□ -0.44
ABCD4-227ENST00000557554 UPF3AQ9H1J1 476 aaKnown RBP12.3□□□□□ -0.44
ABCD4-227ENST00000557554 WNT8AQ9H1J5 351 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 HIPK3Q9H422 1215 aa12.3□□□□□ -0.44
ABCD4-227ENST00000557554 APBB1O00213 710 aa12.29□□□□□ -0.44
ABCD4-227ENST00000557554 ALADP13716 330 aa12.29□□□□□ -0.44
ABCD4-227ENST00000557554 GJA9P57773 515 aa12.29□□□□□ -0.44
ABCD4-227ENST00000557554 DYNLL1P63167 89 aaKnown RBP12.29□□□□□ -0.44
ABCD4-227ENST00000557554 TAP1Q03518 808 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms