RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 ZNF543Q08ER8 600 aa14.35□□□□□ -0.11
SHMT2-233ENST00000557529 SEPT2Q15019 361 aa14.35□□□□□ -0.11
SHMT2-233ENST00000557529 SLC39A14Q15043 492 aa14.35□□□□□ -0.11
SHMT2-233ENST00000557529 TPRNQ4KMQ1 711 aa14.35□□□□□ -0.11
SHMT2-233ENST00000557529 CLEC10AQ8IUN9 316 aa14.35□□□□□ -0.11
SHMT2-233ENST00000557529 MICALL2Q8IY33 904 aa14.35□□□□□ -0.11
SHMT2-233ENST00000557529 ZNF713Q8N859 430 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-233ENST00000557529 DCAF4Q8WV16 495 aa14.35□□□□□ -0.11
SHMT2-233ENST00000557529 RIOX1Q9H6W3 641 aa14.35□□□□□ -0.11
SHMT2-233ENST00000557529 DDX19AQ9NUU7 478 aaKnown RBP14.35□□□□□ -0.11
SHMT2-233ENST00000557529 CNOT7Q9UIV1 285 aaKnown RBP14.35□□□□□ -0.11
SHMT2-233ENST00000557529 NOL7Q9UMY1 257 aaKnown RBP14.35□□□□□ -0.11
SHMT2-233ENST00000557529 PPP6R2O75170 966 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 GDF11O95390 407 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 SLURP2P0DP57 97 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 NR5A1Q13285 461 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 SLC35G1Q2M3R5 365 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 ADALQ6DHV7 355 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 CCDC73Q6ZRK6 1079 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 OXER1Q8TDS5 423 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 PIBF1Q8WXW3 757 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 SHISA4Q96DD7 197 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 BARHL2Q9NY43 387 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 CEP131Q9UPN4 1083 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 ZNF541Q9H0D2 1346 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 SHTN1A0MZ66 631 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 SYCE3A1L190 88 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 H7C1D1 291 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 GH2P01242 217 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 LIG1P18858 919 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 NPY5RQ15761 445 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 CCDC96Q2M329 555 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 KIF4BQ2VIQ3 1234 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 WWC2Q6AWC2 1192 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 LRSAM1Q6UWE0 723 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 HEATR3Q7Z4Q2 680 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 CCAR1Q8IX12 1150 aaKnown RBP14.34□□□□□ -0.11
SHMT2-233ENST00000557529 GPC2Q8N158 579 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 DAGLBQ8NCG7 672 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 GMCL1P1Q8NEA9 526 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 TMEM39BQ9GZU3 492 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 PCDHA7Q9UN72 937 aa14.34□□□□□ -0.11
SHMT2-233ENST00000557529 FRMPD2Q68DX3 1309 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-233ENST00000557529 STXBP3O00186 592 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 BMP15O95972 392 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 TRAPPC10P48553 1259 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 MRE11P49959 708 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 MAP3K10Q02779 954 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 PTPAQ15257 358 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 SLFN13Q68D06 897 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 BLIDQ8IZY5 108 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 GPKOWQ92917 476 aaPredicted RBP eCLIP14.33□□□□□ -0.12
SHMT2-233ENST00000557529 TNFRSF25Q93038 417 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 SYT17Q9BSW7 474 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 NUP62CLQ9H1M0 184 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 ARHGEF10LQ9HCE6 1279 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 GPCPD1Q9NPB8 672 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.33□□□□□ -0.12
SHMT2-233ENST00000557529 PGAP2Q9UHJ9 254 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 PCDHA4Q9UN74 947 aa14.33□□□□□ -0.12
SHMT2-233ENST00000557529 MORC2Q9Y6X9 1032 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-233ENST00000557529 SLC1A4P43007 532 aa14.32□□□□□ -0.12
SHMT2-233ENST00000557529 TOB1P50616 345 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-233ENST00000557529 RASA3Q14644 834 aa14.32□□□□□ -0.12
SHMT2-233ENST00000557529 RASGRP2Q7LDG7 609 aa14.32□□□□□ -0.12
SHMT2-233ENST00000557529 SIAH1Q8IUQ4 282 aa14.32□□□□□ -0.12
SHMT2-233ENST00000557529 FSIP1Q8NA03 581 aa14.32□□□□□ -0.12
SHMT2-233ENST00000557529 MRPS27Q92552 414 aaKnown RBP14.32□□□□□ -0.12
SHMT2-233ENST00000557529 GMCL1Q96IK5 515 aa14.32□□□□□ -0.12
SHMT2-233ENST00000557529 PIGSQ96S52 555 aa14.32□□□□□ -0.12
SHMT2-233ENST00000557529 UBA5Q9GZZ9 404 aa14.32□□□□□ -0.12
SHMT2-233ENST00000557529 DACT1Q9NYF0 836 aa14.32□□□□□ -0.12
SHMT2-233ENST00000557529 ESYT2A0FGR8 921 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 TRIM75PA6NK02 468 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 CUTAO60888 179 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 VEGFAP15692 232 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-233ENST00000557529 CMA1P23946 247 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 GNA11P29992 359 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 NAPAP54920 295 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 FAM160A1Q05DH4 1040 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 RRP1BQ14684 758 aaKnown RBP14.31□□□□□ -0.12
SHMT2-233ENST00000557529 SHROOM1Q2M3G4 852 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-233ENST00000557529 TBC1D10BQ4KMP7 808 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-233ENST00000557529 AXDND1Q5T1B0 1012 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-233ENST00000557529 SAMD7Q7Z3H4 446 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 GAS2L3Q86XJ1 694 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 HOMER1Q86YM7 354 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 ZMYND12Q9H0C1 365 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 CPVLQ9H3G5 476 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 CLSTN2Q9H4D0 955 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 GRPEL1Q9HAV7 217 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 VAT1LQ9HCJ6 419 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 C6orf50Q9HD87 102 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 GINM1Q9NU53 330 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 GPRC5DQ9NZD1 345 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 ZBTB21Q9ULJ3 1066 aa14.31□□□□□ -0.12
SHMT2-233ENST00000557529 MYH4Q9Y623 1939 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 PNMA6FA0A0J9YX94 578 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 F5H6K3 240 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 CTAGE5O15320 804 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms