RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 MCM9Q9NXL9 1143 aa10.95□□□□□ -0.66
NPC2-209ENST00000557510 IFIT2P09913 472 aaKnown RBP10.94□□□□□ -0.66
NPC2-209ENST00000557510 SYN1P17600 705 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 RGS2P41220 211 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 MAP2K5Q13163 448 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 TTF1Q15361 905 aaPredicted RBP10.94□□□□□ -0.66
NPC2-209ENST00000557510 LHX8Q68G74 356 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 CCAR1Q8IX12 1150 aaKnown RBP10.94□□□□□ -0.66
NPC2-209ENST00000557510 RPAP2Q8IXW5 612 aaPredicted RBP10.94□□□□□ -0.66
NPC2-209ENST00000557510 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.94□□□□□ -0.66
NPC2-209ENST00000557510 GTF3C2Q8WUA4 911 aaPredicted RBP10.94□□□□□ -0.66
NPC2-209ENST00000557510 LRCH3Q96II8 777 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 APBA2Q99767 749 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 CRNKL1Q9BZJ0 848 aaKnown RBP10.94□□□□□ -0.66
NPC2-209ENST00000557510 NBPF3Q9H094 633 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 BOLA2Q9H3K6 86 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 C11orf49Q9H6J7 331 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 DDX19BQ9UMR2 479 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 RABGAP1Q9Y3P9 1069 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 SMCHD1A6NHR9 2005 aa10.94□□□□□ -0.66
NPC2-209ENST00000557510 MPHOSPH10O00566 681 aaKnown RBP10.93□□□□□ -0.66
NPC2-209ENST00000557510 SMARCA5O60264 1052 aaPredicted RBP10.93□□□□□ -0.66
NPC2-209ENST00000557510 MBD4O95243 580 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 COL6A1P12109 1028 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 AKR1B1P15121 316 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 CAPN2P17655 700 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 PTPREP23469 700 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 ADD2P35612 726 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 USP14P54578 494 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 WDR78Q5VTH9 848 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 TMED8Q6PL24 325 aaPredicted RBP10.93□□□□□ -0.66
NPC2-209ENST00000557510 LBX2Q6XYB7 198 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 SIAH1Q8IUQ4 282 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 NPLOC4Q8TAT6 608 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 GDF15Q99988 308 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 CABP5Q9NP86 173 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 PAG1Q9NWQ8 432 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 ZNF236Q9UL36 1845 aa10.93□□□□□ -0.66
NPC2-209ENST00000557510 GREB1LQ9C091 1923 aaPredicted RBP10.92□□□□□ -0.66
NPC2-209ENST00000557510 HMMRO75330 724 aa10.92□□□□□ -0.66
NPC2-209ENST00000557510 ATP5JP18859 108 aa10.92□□□□□ -0.66
NPC2-209ENST00000557510 GRB14Q14449 540 aa10.92□□□□□ -0.66
NPC2-209ENST00000557510 B4GALNT3Q6L9W6 998 aa10.92□□□□□ -0.66
NPC2-209ENST00000557510 TRPV1Q8NER1 839 aa10.92□□□□□ -0.66
NPC2-209ENST00000557510 OXER1Q8TDS5 423 aa10.92□□□□□ -0.66
NPC2-209ENST00000557510 MOV10L1Q9BXT6 1211 aaKnown RBP10.92□□□□□ -0.66
NPC2-209ENST00000557510 CWC22Q9HCG8 908 aaKnown RBP10.92□□□□□ -0.66
NPC2-209ENST00000557510 PLXNA1Q9UIW2 1896 aa10.91□□□□□ -0.66
NPC2-209ENST00000557510 SLC15A5A6NIM6 579 aa10.91□□□□□ -0.66
NPC2-209ENST00000557510 RAB11FIP3O75154 756 aa10.91□□□□□ -0.66
NPC2-209ENST00000557510 IGHA2P01877 340 aa10.91□□□□□ -0.66
NPC2-209ENST00000557510 MS4A1P11836 297 aa10.91□□□□□ -0.66
NPC2-209ENST00000557510 CYP2C19P33261 490 aa10.91□□□□□ -0.66
NPC2-209ENST00000557510 MAGEA10P43363 369 aaPredicted RBP10.91□□□□□ -0.66
NPC2-209ENST00000557510 CCNA1P78396 465 aa10.91□□□□□ -0.66
NPC2-209ENST00000557510 LRRC26Q2I0M4 334 aa10.91□□□□□ -0.66
NPC2-209ENST00000557510 TRMT44Q8IYL2 757 aaKnown RBP10.91□□□□□ -0.66
NPC2-209ENST00000557510 SPICE1Q8N0Z3 855 aa10.91□□□□□ -0.66
NPC2-209ENST00000557510 HAUS7Q99871 368 aa10.91□□□□□ -0.66
NPC2-209ENST00000557510 TANGO6Q9C0B7 1094 aa10.91□□□□□ -0.66
NPC2-209ENST00000557510 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
NPC2-209ENST00000557510 A0A1W2PPC1 479 aa10.9□□□□□ -0.66
NPC2-209ENST00000557510 USP17L12C9JPN9 530 aa10.9□□□□□ -0.66
NPC2-209ENST00000557510 USP17L21D6R901 530 aa10.9□□□□□ -0.66
NPC2-209ENST00000557510 HOXC6P09630 235 aa10.9□□□□□ -0.66
NPC2-209ENST00000557510 CDK8P49336 464 aa10.9□□□□□ -0.66
NPC2-209ENST00000557510 COG2Q14746 738 aa10.9□□□□□ -0.66
NPC2-209ENST00000557510 C12orf60Q5U649 245 aa10.9□□□□□ -0.66
NPC2-209ENST00000557510 TMEM179Q6ZVK1 233 aa10.9□□□□□ -0.66
NPC2-209ENST00000557510 ATG4CQ96DT6 458 aa10.9□□□□□ -0.66
NPC2-209ENST00000557510 PUS7LQ9H0K6 701 aaKnown RBP10.9□□□□□ -0.66
NPC2-209ENST00000557510 LTBP2Q14767 1821 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 COBLO75128 1261 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 GLRX3O76003 335 aaKnown RBP10.89□□□□□ -0.67
NPC2-209ENST00000557510 CYBAP13498 195 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 ERCC3P19447 782 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 ADORA2AP29274 412 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 BMP8BP34820 402 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 ICA1Q05084 483 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 MFSD14CQ5VZR4 134 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 TSHZ3Q63HK5 1081 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 SPATC1LQ9H0A9 340 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 ATP8A2Q9NTI2 1148 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 FBXO28Q9NVF7 368 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 SWAP70Q9UH65 585 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 DDX20Q9UHI6 824 aaKnown RBP10.89□□□□□ -0.67
NPC2-209ENST00000557510 IVNS1ABPQ9Y6Y0 642 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 MYH4Q9Y623 1939 aa10.89□□□□□ -0.67
NPC2-209ENST00000557510 DNAH12Q6ZR08 3092 aa10.88□□□□□ -0.67
NPC2-209ENST00000557510 FLOT1O75955 427 aa10.88□□□□□ -0.67
NPC2-209ENST00000557510 CNGA1P29973 690 aa10.88□□□□□ -0.67
NPC2-209ENST00000557510 ATP2B2Q01814 1243 aa10.88□□□□□ -0.67
NPC2-209ENST00000557510 PLS1Q14651 629 aa10.88□□□□□ -0.67
NPC2-209ENST00000557510 UBE3CQ15386 1083 aa10.88□□□□□ -0.67
NPC2-209ENST00000557510 PRAMEF19Q5SWL8 479 aa10.88□□□□□ -0.67
NPC2-209ENST00000557510 ANO1Q5XXA6 986 aa10.88□□□□□ -0.67
NPC2-209ENST00000557510 CTR9Q6PD62 1173 aa10.88□□□□□ -0.67
NPC2-209ENST00000557510 C16orf86Q6ZW13 317 aa10.88□□□□□ -0.67
NPC2-209ENST00000557510 IPO9Q96P70 1041 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms