RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TOX2Q96NM4 488 aa7.46□□□□□ -1.22
VRK1-207ENST00000557352 ANTXR1Q9H6X2 564 aa7.46□□□□□ -1.22
VRK1-207ENST00000557352 DCP1AQ9NPI6 582 aaPredicted RBP7.46□□□□□ -1.22
VRK1-207ENST00000557352 RAD51AP2Q09MP3 1159 aa7.45□□□□□ -1.22
VRK1-207ENST00000557352 SNW1Q13573 536 aaKnown RBP7.45□□□□□ -1.22
VRK1-207ENST00000557352 TMC3Q7Z5M5 1100 aa7.45□□□□□ -1.22
VRK1-207ENST00000557352 SPPL2CQ8IUH8 684 aa7.45□□□□□ -1.22
VRK1-207ENST00000557352 USHBP1Q8N6Y0 703 aa7.45□□□□□ -1.22
VRK1-207ENST00000557352 DAGLBQ8NCG7 672 aa7.45□□□□□ -1.22
VRK1-207ENST00000557352 LINC01599Q8WXQ3 324 aa7.45□□□□□ -1.22
VRK1-207ENST00000557352 SPON2Q9BUD6 331 aa7.45□□□□□ -1.22
VRK1-207ENST00000557352 KRTAP4-9Q9BYQ8 210 aa7.45□□□□□ -1.22
VRK1-207ENST00000557352 NME1P15531 152 aaKnown RBP7.44□□□□□ -1.22
VRK1-207ENST00000557352 CCNFP41002 786 aa7.44□□□□□ -1.22
VRK1-207ENST00000557352 DUSP4Q13115 394 aa7.44□□□□□ -1.22
VRK1-207ENST00000557352 RNF111Q6ZNA4 994 aa7.44□□□□□ -1.22
VRK1-207ENST00000557352 LCNL1Q6ZST4 164 aa7.44□□□□□ -1.22
VRK1-207ENST00000557352 ANKLE2Q86XL3 938 aa7.44□□□□□ -1.22
VRK1-207ENST00000557352 KIAA0825Q8IV33 1275 aa7.44□□□□□ -1.22
VRK1-207ENST00000557352 LRRC56Q8IYG6 542 aaPredicted RBP7.44□□□□□ -1.22
VRK1-207ENST00000557352 TCTN2Q96GX1 697 aa7.44□□□□□ -1.22
VRK1-207ENST00000557352 G6PC3Q9BUM1 346 aa7.44□□□□□ -1.22
VRK1-207ENST00000557352 BACH2Q9BYV9 841 aa7.44□□□□□ -1.22
VRK1-207ENST00000557352 ZBTB7CA1YPR0 619 aa7.43□□□□□ -1.22
VRK1-207ENST00000557352 MEIS3P2A8K0S8 358 aa7.43□□□□□ -1.22
VRK1-207ENST00000557352 NFIBO00712 420 aa7.43□□□□□ -1.22
VRK1-207ENST00000557352 CLEC3AO75596 197 aa7.43□□□□□ -1.22
VRK1-207ENST00000557352 ZNF76P36508 570 aa7.43□□□□□ -1.22
VRK1-207ENST00000557352 CHRNEQ04844 493 aa7.43□□□□□ -1.22
VRK1-207ENST00000557352 LRRFIP1Q32MZ4 808 aaKnown RBP7.43□□□□□ -1.22
VRK1-207ENST00000557352 ZNF655Q8N720 491 aaPredicted RBP7.43□□□□□ -1.22
VRK1-207ENST00000557352 ANKS4BQ8N8V4 417 aa7.43□□□□□ -1.22
VRK1-207ENST00000557352 ZNF512BQ96KM6 892 aaPredicted RBP7.43□□□□□ -1.22
VRK1-207ENST00000557352 FOXP3Q9BZS1 431 aa7.43□□□□□ -1.22
VRK1-207ENST00000557352 TNFRSF10CO14798 259 aa7.42□□□□□ -1.22
VRK1-207ENST00000557352 RPL10P27635 214 aaKnown RBP7.42□□□□□ -1.22
VRK1-207ENST00000557352 TMEM192Q8IY95 271 aa7.42□□□□□ -1.22
VRK1-207ENST00000557352 PRDM14Q9GZV8 571 aa7.42□□□□□ -1.22
VRK1-207ENST00000557352 SLC6A17Q9H1V8 727 aa7.42□□□□□ -1.22
VRK1-207ENST00000557352 CWC22Q9HCG8 908 aaKnown RBP7.42□□□□□ -1.22
VRK1-207ENST00000557352 TCFL5Q9UL49 500 aa7.42□□□□□ -1.22
VRK1-207ENST00000557352 YBX2Q9Y2T7 364 aaKnown RBP7.42□□□□□ -1.22
VRK1-207ENST00000557352 KRTAP9-7A8MTY7 169 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 PSPNO60542 156 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 PRAMEF1O95521 474 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 TMEM253P0C7T8 217 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 PCBP3P57721 371 aaKnown RBP7.41□□□□□ -1.22
VRK1-207ENST00000557352 FANCCQ00597 558 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 SNX17Q15036 470 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 WAPLQ7Z5K2 1190 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 IRF2BP1Q8IU81 584 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 LINC00116Q8NCU8 138 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 ZSCAN18Q8TBC5 510 aaPredicted RBP7.41□□□□□ -1.22
VRK1-207ENST00000557352 SHISA4Q96DD7 197 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 SLC26A8Q96RN1 970 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 SLC9A7Q96T83 725 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 GPR160Q9UJ42 338 aa7.41□□□□□ -1.22
VRK1-207ENST00000557352 TMEM82A0PJX8 343 aa7.4□□□□□ -1.22
VRK1-207ENST00000557352 NOTOA8MTQ0 251 aa7.4□□□□□ -1.22
VRK1-207ENST00000557352 ETV2O00321 342 aaPredicted RBP7.4□□□□□ -1.22
VRK1-207ENST00000557352 SIGLEC6O43699 453 aa7.4□□□□□ -1.22
VRK1-207ENST00000557352 MED14OSP0DP75 135 aa7.4□□□□□ -1.22
VRK1-207ENST00000557352 MFAP1P55081 439 aaKnown RBP7.4□□□□□ -1.22
VRK1-207ENST00000557352 BBS9Q3SYG4 887 aa7.4□□□□□ -1.22
VRK1-207ENST00000557352 ATG14Q6ZNE5 492 aa7.4□□□□□ -1.22
VRK1-207ENST00000557352 USP48Q86UV5 1035 aa7.4□□□□□ -1.22
VRK1-207ENST00000557352 INTS4Q96HW7 963 aaKnown RBP7.4□□□□□ -1.22
VRK1-207ENST00000557352 SLC6A18Q96N87 628 aa7.4□□□□□ -1.22
VRK1-207ENST00000557352 CD320Q9NPF0 282 aa7.4□□□□□ -1.22
VRK1-207ENST00000557352 METTL5Q9NRN9 209 aaKnown RBP7.4□□□□□ -1.22
VRK1-207ENST00000557352 ZMYM5Q9UJ78 669 aa7.4□□□□□ -1.22
VRK1-207ENST00000557352 MINPP1Q9UNW1 487 aa7.4□□□□□ -1.22
VRK1-207ENST00000557352 SSU72P8A0A1W2PR75 194 aa7.39□□□□□ -1.23
VRK1-207ENST00000557352 USP2O75604 605 aaPredicted RBP7.39□□□□□ -1.23
VRK1-207ENST00000557352 SYPP08247 313 aa7.39□□□□□ -1.23
VRK1-207ENST00000557352 GLDCP23378 1020 aa7.39□□□□□ -1.23
VRK1-207ENST00000557352 GALK1P51570 392 aa7.39□□□□□ -1.23
VRK1-207ENST00000557352 ZNF394Q53GI3 561 aa7.39□□□□□ -1.23
VRK1-207ENST00000557352 SIAH1Q8IUQ4 282 aa7.39□□□□□ -1.23
VRK1-207ENST00000557352 KCNN1Q92952 543 aa7.39□□□□□ -1.23
VRK1-207ENST00000557352 MKRN2Q9H000 416 aaKnown RBP7.39□□□□□ -1.23
VRK1-207ENST00000557352 ZNRF3Q9ULT6 936 aa7.39□□□□□ -1.23
VRK1-207ENST00000557352 PCDHGB7Q9Y5F8 929 aa7.39□□□□□ -1.23
VRK1-207ENST00000557352 NPIPB6E9PJ23 425 aa7.38□□□□□ -1.23
VRK1-207ENST00000557352 FKTNO75072 461 aa7.38□□□□□ -1.23
VRK1-207ENST00000557352 EFEMP2O95967 443 aa7.38□□□□□ -1.23
VRK1-207ENST00000557352 ZSCAN22P10073 491 aaPredicted RBP7.38□□□□□ -1.23
VRK1-207ENST00000557352 INTS3Q68E01 1043 aaKnown RBP7.38□□□□□ -1.23
VRK1-207ENST00000557352 ZPBP2Q6X784 338 aa7.38□□□□□ -1.23
VRK1-207ENST00000557352 MAP6Q96JE9 813 aa7.38□□□□□ -1.23
VRK1-207ENST00000557352 CHST7Q9NS84 486 aa7.38□□□□□ -1.23
VRK1-207ENST00000557352 ACRP10323 421 aa7.37□□□□□ -1.23
VRK1-207ENST00000557352 PDE6BP35913 854 aa7.37□□□□□ -1.23
VRK1-207ENST00000557352 KIR2DL1P43626 348 aaPredicted RBP7.37□□□□□ -1.23
VRK1-207ENST00000557352 KIR2DL2P43627 348 aaPredicted RBP7.37□□□□□ -1.23
VRK1-207ENST00000557352 ZNF605Q86T29 641 aa7.37□□□□□ -1.23
VRK1-207ENST00000557352 NLRX1Q86UT6 975 aa7.37□□□□□ -1.23
VRK1-207ENST00000557352 HHIPL1Q96JK4 782 aa7.37□□□□□ -1.23
VRK1-207ENST00000557352 MCOLN1Q9GZU1 580 aa7.37□□□□□ -1.23
VRK1-207ENST00000557352 ZNF552Q9H707 407 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms