RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 TNRC6CQ9HCJ0 1690 aaKnown RBP25.67■■□□□ 1.7
RCCD1-208ENST00000557266 TEX33O43247 280 aa25.66■■□□□ 1.7
RCCD1-208ENST00000557266 FBXO38Q6PIJ6 1188 aa25.66■■□□□ 1.7
RCCD1-208ENST00000557266 STAMQ92783 540 aa25.66■■□□□ 1.7
RCCD1-208ENST00000557266 OGFRQ9NZT2 677 aa25.66■■□□□ 1.7
RCCD1-208ENST00000557266 DDX41Q9UJV9 622 aaKnown RBP25.66■■□□□ 1.7
RCCD1-208ENST00000557266 RTCBQ9Y3I0 505 aaKnown RBP25.66■■□□□ 1.7
RCCD1-208ENST00000557266 CCDC88AQ3V6T2 1871 aa25.66■■□□□ 1.7
RCCD1-208ENST00000557266 PDXDC2PQ6P474 469 aa25.66■■□□□ 1.7
RCCD1-208ENST00000557266 TOGARAM2Q6ZUX3 1019 aa25.66■■□□□ 1.7
RCCD1-208ENST00000557266 DYNLL2Q96FJ2 89 aa25.66■■□□□ 1.7
RCCD1-208ENST00000557266 CCNL1Q9UK58 526 aaPredicted RBP25.66■■□□□ 1.7
RCCD1-208ENST00000557266 FAM205AQ6ZU69 1335 aa25.65■■□□□ 1.7
RCCD1-208ENST00000557266 DGKHQ86XP1 1220 aa25.65■■□□□ 1.7
RCCD1-208ENST00000557266 IQUBQ8NA54 791 aa25.65■■□□□ 1.7
RCCD1-208ENST00000557266 SH3RF3Q8TEJ3 882 aaPredicted RBP25.65■■□□□ 1.7
RCCD1-208ENST00000557266 STAG2Q8N3U4 1231 aa25.64■■□□□ 1.7
RCCD1-208ENST00000557266 PNMA1Q8ND90 353 aa25.64■■□□□ 1.7
RCCD1-208ENST00000557266 MTRQ99707 1265 aa25.64■■□□□ 1.7
RCCD1-208ENST00000557266 LDHBP07195 334 aaKnown RBP25.64■■□□□ 1.69
RCCD1-208ENST00000557266 ZSCAN20P17040 1043 aaPredicted RBP25.64■■□□□ 1.69
RCCD1-208ENST00000557266 USP5P45974 858 aa25.64■■□□□ 1.69
RCCD1-208ENST00000557266 ERCC6LQ2NKX8 1250 aa25.64■■□□□ 1.69
RCCD1-208ENST00000557266 ANKS1AQ92625 1134 aa25.64■■□□□ 1.69
RCCD1-208ENST00000557266 GPKOWQ92917 476 aaPredicted RBP eCLIP25.64■■□□□ 1.698e-10■□□□□ 8.7
RCCD1-208ENST00000557266 BLZF1Q9H2G9 400 aa25.64■■□□□ 1.69
RCCD1-208ENST00000557266 ADD3Q9UEY8 706 aaKnown RBP25.64■■□□□ 1.69
RCCD1-208ENST00000557266 ROBO3Q96MS0 1386 aa25.64■■□□□ 1.69
RCCD1-208ENST00000557266 CALML3P27482 149 aa25.63■■□□□ 1.69
RCCD1-208ENST00000557266 RXRBP28702 533 aa25.63■■□□□ 1.69
RCCD1-208ENST00000557266 PBX1P40424 430 aa25.63■■□□□ 1.69
RCCD1-208ENST00000557266 GRIK5Q16478 980 aa25.63■■□□□ 1.69
RCCD1-208ENST00000557266 BLIDQ8IZY5 108 aa25.63■■□□□ 1.69
RCCD1-208ENST00000557266 C4orf32Q8N8J7 132 aa25.63■■□□□ 1.69
RCCD1-208ENST00000557266 ANKIB1Q9P2G1 1089 aa25.63■■□□□ 1.69
RCCD1-208ENST00000557266 NPHP1O15259 732 aa25.63■■□□□ 1.69
RCCD1-208ENST00000557266 WDR66Q8TBY9 1149 aa25.63■■□□□ 1.69
RCCD1-208ENST00000557266 DIXDC1Q155Q3 683 aa25.62■■□□□ 1.69
RCCD1-208ENST00000557266 TYW1BQ6NUM6 668 aa25.62■■□□□ 1.69
RCCD1-208ENST00000557266 SH3GLB2Q9NR46 395 aa25.62■■□□□ 1.69
RCCD1-208ENST00000557266 CTNND2Q9UQB3 1225 aa25.62■■□□□ 1.69
RCCD1-208ENST00000557266 PARP3Q9Y6F1 533 aa25.62■■□□□ 1.69
RCCD1-208ENST00000557266 GRM4Q14833 912 aa25.61■■□□□ 1.69
RCCD1-208ENST00000557266 NFIXQ14938 502 aa25.61■■□□□ 1.69
RCCD1-208ENST00000557266 SLC35G1Q2M3R5 365 aa25.61■■□□□ 1.69
RCCD1-208ENST00000557266 ARL6IP4Q66PJ3 421 aaKnown RBP25.61■■□□□ 1.69
RCCD1-208ENST00000557266 MAD2L2Q9UI95 211 aa25.61■■□□□ 1.69
RCCD1-208ENST00000557266 PCDHA4Q9UN74 947 aa25.61■■□□□ 1.69
RCCD1-208ENST00000557266 USP17L3A6NCW0 530 aa25.61■■□□□ 1.69
RCCD1-208ENST00000557266 USP17L4A6NCW7 530 aa25.61■■□□□ 1.69
RCCD1-208ENST00000557266 GOLGA6L9A6NEM1 432 aa25.61■■□□□ 1.69
RCCD1-208ENST00000557266 AKR1B15C9JRZ8 316 aaPredicted RBP25.61■■□□□ 1.69
RCCD1-208ENST00000557266 GRAPQ13588 217 aa25.61■■□□□ 1.69
RCCD1-208ENST00000557266 USP17L1Q7RTZ2 530 aa25.61■■□□□ 1.69
RCCD1-208ENST00000557266 GRAPLQ8TC17 118 aaPredicted RBP25.61■■□□□ 1.69
RCCD1-208ENST00000557266 PANX2Q96RD6 677 aa25.61■■□□□ 1.69
RCCD1-208ENST00000557266 PYM1Q9BRP8 204 aaKnown RBP25.61■■□□□ 1.69
RCCD1-208ENST00000557266 M0R2N6 131 aa25.6■■□□□ 1.69
RCCD1-208ENST00000557266 NT5C2P49902 561 aa25.6■■□□□ 1.69
RCCD1-208ENST00000557266 IGSF22Q8N9C0 903 aa25.6■■□□□ 1.69
RCCD1-208ENST00000557266 RASGRP4Q8TDF6 673 aa25.6■■□□□ 1.69
RCCD1-208ENST00000557266 RGS17Q9UGC6 210 aaPredicted RBP25.6■■□□□ 1.69
RCCD1-208ENST00000557266 LEMD3Q9Y2U8 911 aa25.6■■□□□ 1.69
RCCD1-208ENST00000557266 GTPBP6O43824 516 aaPredicted RBP25.6■■□□□ 1.69
RCCD1-208ENST00000557266 URI1O94763 535 aaPredicted RBP25.6■■□□□ 1.69
RCCD1-208ENST00000557266 LONP1P36776 959 aaKnown RBP25.6■■□□□ 1.69
RCCD1-208ENST00000557266 FAM177A1Q8N128 213 aaPredicted RBP25.6■■□□□ 1.69
RCCD1-208ENST00000557266 CTAGE1Q96RT6 745 aa25.6■■□□□ 1.69
RCCD1-208ENST00000557266 MKNK2Q9HBH9 465 aa25.6■■□□□ 1.69
RCCD1-208ENST00000557266 COBLO75128 1261 aa25.59■■□□□ 1.69
RCCD1-208ENST00000557266 RBL2Q08999 1139 aa25.59■■□□□ 1.69
RCCD1-208ENST00000557266 MTF1Q14872 753 aa25.59■■□□□ 1.69
RCCD1-208ENST00000557266 SLC44A5Q8NCS7 719 aa25.59■■□□□ 1.69
RCCD1-208ENST00000557266 WDR24Q96S15 920 aa25.59■■□□□ 1.69
RCCD1-208ENST00000557266 DESI2Q9BSY9 194 aa25.59■■□□□ 1.69
RCCD1-208ENST00000557266 TRIM37O94972 964 aa25.58■■□□□ 1.69
RCCD1-208ENST00000557266 H2AFXP16104 143 aaPredicted RBP25.58■■□□□ 1.69
RCCD1-208ENST00000557266 TGFBRAP1Q8WUH2 860 aa25.58■■□□□ 1.69
RCCD1-208ENST00000557266 GPR101Q96P66 508 aaPredicted RBP25.58■■□□□ 1.69
RCCD1-208ENST00000557266 IGSF3O75054 1194 aa25.58■■□□□ 1.69
RCCD1-208ENST00000557266 CDC25AP30304 524 aa25.58■■□□□ 1.69
RCCD1-208ENST00000557266 PPP4CP60510 307 aa25.58■■□□□ 1.69
RCCD1-208ENST00000557266 GSTO1P78417 241 aa25.58■■□□□ 1.69
RCCD1-208ENST00000557266 RRAGBQ5VZM2 374 aa25.58■■□□□ 1.69
RCCD1-208ENST00000557266 SOWAHDA6NJG2 315 aa25.57■■□□□ 1.68
RCCD1-208ENST00000557266 CYTH3O43739 400 aa25.57■■□□□ 1.68
RCCD1-208ENST00000557266 TSPY3P0CV98 308 aa25.57■■□□□ 1.68
RCCD1-208ENST00000557266 TSPY8P0CW00 308 aa25.57■■□□□ 1.68
RCCD1-208ENST00000557266 GNG11P61952 73 aa25.57■■□□□ 1.68
RCCD1-208ENST00000557266 WWC2Q6AWC2 1192 aa25.57■■□□□ 1.68
RCCD1-208ENST00000557266 SRRTQ9BXP5 876 aaKnown RBP25.57■■□□□ 1.68
RCCD1-208ENST00000557266 TCP11L1Q9NUJ3 509 aa25.57■■□□□ 1.68
RCCD1-208ENST00000557266 BAG3O95817 575 aa25.57■■□□□ 1.68
RCCD1-208ENST00000557266 GNAQP50148 359 aa25.57■■□□□ 1.68
RCCD1-208ENST00000557266 PPFIBP1Q86W92 1011 aa25.57■■□□□ 1.68
RCCD1-208ENST00000557266 ZNF446Q9NWS9 450 aa25.57■■□□□ 1.68
RCCD1-208ENST00000557266 RWDD2AQ9UIY3 292 aa25.57■■□□□ 1.68
RCCD1-208ENST00000557266 CCDC178Q5BJE1 867 aa25.56■■□□□ 1.68
RCCD1-208ENST00000557266 PCDHA6Q9UN73 950 aa25.56■■□□□ 1.68
RCCD1-208ENST00000557266 PCDHA8Q9Y5H6 950 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms