RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 KLRC3Q07444 240 aa14.14□□□□□ -0.15
SYNE2-226ENST00000557084 POTEEQ6S8J3 1075 aa14.14□□□□□ -0.15
SYNE2-226ENST00000557084 ZNF589Q86UQ0 364 aaPredicted RBP14.14□□□□□ -0.15
SYNE2-226ENST00000557084 NEDD1Q8NHV4 660 aa14.14□□□□□ -0.15
SYNE2-226ENST00000557084 ATG4CQ96DT6 458 aa14.14□□□□□ -0.15
SYNE2-226ENST00000557084 CEP95Q96GE4 821 aa14.14□□□□□ -0.15
SYNE2-226ENST00000557084 SPATC1LQ9H0A9 340 aa14.14□□□□□ -0.15
SYNE2-226ENST00000557084 MTMR4Q9NYA4 1195 aa14.14□□□□□ -0.15
SYNE2-226ENST00000557084 MGAMO43451 1857 aa14.14□□□□□ -0.15
SYNE2-226ENST00000557084 SLC15A5A6NIM6 579 aa14.13□□□□□ -0.15
SYNE2-226ENST00000557084 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
SYNE2-226ENST00000557084 FOXP2O15409 715 aa14.13□□□□□ -0.15
SYNE2-226ENST00000557084 TFRCP02786 760 aaKnown RBP14.13□□□□□ -0.15
SYNE2-226ENST00000557084 XRCC5P13010 732 aaKnown RBP14.13□□□□□ -0.15
SYNE2-226ENST00000557084 RRP12Q5JTH9 1297 aaKnown RBP14.13□□□□□ -0.15
SYNE2-226ENST00000557084 NCAPG2Q86XI2 1143 aa14.13□□□□□ -0.15
SYNE2-226ENST00000557084 MOV10L1Q9BXT6 1211 aaKnown RBP14.13□□□□□ -0.15
SYNE2-226ENST00000557084 ANAPC4Q9UJX5 808 aa14.13□□□□□ -0.15
SYNE2-226ENST00000557084 STX8Q9UNK0 236 aa14.13□□□□□ -0.15
SYNE2-226ENST00000557084 DOCK3Q8IZD9 2030 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 IGKV6D-41A0A0C4DH26 115 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 NDUFB10O96000 172 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 PTPREP23469 700 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 HAND2P61296 217 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 MAP2K5Q13163 448 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 MORN1Q5T089 497 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 TTC22Q5TAA0 569 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 DPP9Q86TI2 863 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 LRRC47Q8N1G4 583 aaKnown RBP14.12□□□□□ -0.15
SYNE2-226ENST00000557084 U2AF1L4Q8WU68 220 aaKnown RBP14.12□□□□□ -0.15
SYNE2-226ENST00000557084 DEFB118Q96PH6 123 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 NUP88Q99567 741 aaPredicted RBP14.12□□□□□ -0.15
SYNE2-226ENST00000557084 APBA2Q99767 749 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 SLF1Q9BQI6 1058 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 MROH8Q9H579 483 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 HMX1Q9NP08 348 aaPredicted RBP14.12□□□□□ -0.15
SYNE2-226ENST00000557084 INCENPQ9NQS7 918 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 FBXO28Q9NVF7 368 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 PPP1R9AQ9ULJ8 1098 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 SYNPO2Q9UMS6 1093 aa14.12□□□□□ -0.15
SYNE2-226ENST00000557084 STRNO43815 780 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 ORC4O43929 436 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 SLC25A27O95847 323 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 ERCC3P19447 782 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 PDE4AP27815 886 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 GJA8P48165 433 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 IKQ13123 557 aaPredicted RBP14.11□□□□□ -0.15
SYNE2-226ENST00000557084 MFSD14CQ5VZR4 134 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 SLFN13Q68D06 897 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 MFSD6Q6ZSS7 791 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 SHCBP1Q8NEM2 672 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 MKL1Q969V6 931 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 RNF41Q9H4P4 317 aaPredicted RBP14.11□□□□□ -0.15
SYNE2-226ENST00000557084 SLC5A4Q9NY91 659 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.11□□□□□ -0.15
SYNE2-226ENST00000557084 ZMYM6O95789 1325 aa14.11□□□□□ -0.15
SYNE2-226ENST00000557084 CEP290O15078 2479 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 PLIN4Q96Q06 1357 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 VWA5AO00534 786 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 ZNF213O14771 459 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 ZBED4O75132 1171 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 SGPL1O95470 568 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 PRKAR2AP13861 404 aaKnown RBP14.1□□□□□ -0.15
SYNE2-226ENST00000557084 STAT3P40763 770 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 SLC4A3P48751 1232 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 TMEM132BQ14DG7 1078 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 PRPF38AQ8NAV1 312 aaKnown RBP14.1□□□□□ -0.15
SYNE2-226ENST00000557084 GMCL1P1Q8NEA9 526 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 RUFY2Q8WXA3 655 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 TRIB2Q92519 343 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 USP6NLQ92738 828 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 KIFC2Q96AC6 838 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 CHMP4CQ96CF2 233 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.1□□□□□ -0.15
SYNE2-226ENST00000557084 CTNNA3Q9UI47 895 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 FEM1BQ9UK73 627 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 RPTORQ8N122 1335 aa14.1□□□□□ -0.15
SYNE2-226ENST00000557084 PCP11498 1178 aaKnown RBP14.09□□□□□ -0.15
SYNE2-226ENST00000557084 FCER1AP12319 257 aa14.09□□□□□ -0.15
SYNE2-226ENST00000557084 BMP3P12645 472 aa14.09□□□□□ -0.15
SYNE2-226ENST00000557084 CAPN2P17655 700 aa14.09□□□□□ -0.15
SYNE2-226ENST00000557084 ADORA2AP29274 412 aa14.09□□□□□ -0.15
SYNE2-226ENST00000557084 COPB2P35606 906 aa14.09□□□□□ -0.15
SYNE2-226ENST00000557084 SLC1A4P43007 532 aa14.09□□□□□ -0.15
SYNE2-226ENST00000557084 GRB14Q14449 540 aa14.09□□□□□ -0.15
SYNE2-226ENST00000557084 AKNAD1Q5T1N1 836 aa14.09□□□□□ -0.15
SYNE2-226ENST00000557084 MTMR7Q9Y216 660 aa14.09□□□□□ -0.15
SYNE2-226ENST00000557084 NMT2O60551 498 aa14.08□□□□□ -0.16
SYNE2-226ENST00000557084 FARP2O94887 1054 aaPredicted RBP14.08□□□□□ -0.16
SYNE2-226ENST00000557084 MCCP23508 829 aa14.08□□□□□ -0.16
SYNE2-226ENST00000557084 TRIM32Q13049 653 aa14.08□□□□□ -0.16
SYNE2-226ENST00000557084 KCTD2Q14681 263 aa14.08□□□□□ -0.16
SYNE2-226ENST00000557084 CCL14Q16627 93 aa14.08□□□□□ -0.16
SYNE2-226ENST00000557084 IMMTQ16891 758 aaKnown RBP14.08□□□□□ -0.16
SYNE2-226ENST00000557084 CHURC1Q8WUH1 139 aa14.08□□□□□ -0.16
SYNE2-226ENST00000557084 SHISA4Q96DD7 197 aa14.08□□□□□ -0.16
SYNE2-226ENST00000557084 MMP19Q99542 508 aa14.08□□□□□ -0.16
SYNE2-226ENST00000557084 TEX13BQ9BXU2 312 aa14.08□□□□□ -0.16
SYNE2-226ENST00000557084 PAK6Q9NQU5 681 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms