RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 CAP2P40123 477 aa6.71□□□□□ -1.34
ATXN3-243ENST00000556671 FGD1P98174 961 aa6.71□□□□□ -1.34
ATXN3-243ENST00000556671 SLBPQ14493 270 aaKnown RBP eCLIP6.71□□□□□ -1.34
ATXN3-243ENST00000556671 NKPD1Q17RQ9 610 aa6.71□□□□□ -1.34
ATXN3-243ENST00000556671 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-243ENST00000556671 HDXQ7Z353 690 aa6.71□□□□□ -1.34
ATXN3-243ENST00000556671 FBXO41Q8TF61 875 aa6.71□□□□□ -1.34
ATXN3-243ENST00000556671 WNT10AQ9GZT5 417 aa6.71□□□□□ -1.34
ATXN3-243ENST00000556671 FBRSQ9HAH7 460 aa6.71□□□□□ -1.34
ATXN3-243ENST00000556671 MAPK8IP1Q9UQF2 711 aa6.71□□□□□ -1.34
ATXN3-243ENST00000556671 SLIT1O75093 1534 aa6.71□□□□□ -1.34
ATXN3-243ENST00000556671 SLITRK5O94991 958 aa6.7□□□□□ -1.34
ATXN3-243ENST00000556671 RPS26P62854 115 aaKnown RBP6.7□□□□□ -1.34
ATXN3-243ENST00000556671 SLC23A3Q6PIS1 610 aa6.7□□□□□ -1.34
ATXN3-243ENST00000556671 LRRN4CLQ8ND94 238 aa6.7□□□□□ -1.34
ATXN3-243ENST00000556671 ASB11Q8WXH4 323 aa6.7□□□□□ -1.34
ATXN3-243ENST00000556671 FOXQ1Q9C009 403 aa6.7□□□□□ -1.34
ATXN3-243ENST00000556671 PRDM5Q9NQX1 630 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-243ENST00000556671 RNF19AQ9NV58 838 aa6.7□□□□□ -1.34
ATXN3-243ENST00000556671 STK26Q9P289 416 aa6.7□□□□□ -1.34
ATXN3-243ENST00000556671 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-243ENST00000556671 TRPM2O94759 1503 aa6.7□□□□□ -1.34
ATXN3-243ENST00000556671 MED14O60244 1454 aa6.69□□□□□ -1.34
ATXN3-243ENST00000556671 ARHGAP23Q9P227 1491 aa6.69□□□□□ -1.34
ATXN3-243ENST00000556671 GNAT3A8MTJ3 354 aa6.69□□□□□ -1.34
ATXN3-243ENST00000556671 TOM1O60784 492 aa6.69□□□□□ -1.34
ATXN3-243ENST00000556671 KCNA6P17658 529 aa6.69□□□□□ -1.34
ATXN3-243ENST00000556671 CDK8P49336 464 aa6.69□□□□□ -1.34
ATXN3-243ENST00000556671 CLCN7P51798 805 aa6.69□□□□□ -1.34
ATXN3-243ENST00000556671 CCDC85BQ15834 202 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-243ENST00000556671 WIPI1Q5MNZ9 446 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-243ENST00000556671 DUSP9Q99956 384 aaKnown RBP6.69□□□□□ -1.34
ATXN3-243ENST00000556671 PITPNM2Q9BZ72 1349 aa6.69□□□□□ -1.34
ATXN3-243ENST00000556671 ANKRD33BA6NCL7 494 aa6.68□□□□□ -1.34
ATXN3-243ENST00000556671 NKG7Q16617 165 aa6.68□□□□□ -1.34
ATXN3-243ENST00000556671 EAPPQ56P03 285 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-243ENST00000556671 C22orf34Q6ZV56 151 aa6.68□□□□□ -1.34
ATXN3-243ENST00000556671 SND1Q7KZF4 910 aaKnown RBP eCLIP6.68□□□□□ -1.34
ATXN3-243ENST00000556671 MFSD2AQ8NA29 543 aa6.68□□□□□ -1.34
ATXN3-243ENST00000556671 SIN3AQ96ST3 1273 aa6.68□□□□□ -1.34
ATXN3-243ENST00000556671 TBX22Q9Y458 520 aa6.68□□□□□ -1.34
ATXN3-243ENST00000556671 PCDHB5Q9Y5E4 795 aa6.68□□□□□ -1.34
ATXN3-243ENST00000556671 RPGRIP1LQ68CZ1 1315 aa6.68□□□□□ -1.34
ATXN3-243ENST00000556671 LTBP4Q8N2S1 1624 aa6.68□□□□□ -1.34
ATXN3-243ENST00000556671 PLEKHG1Q9ULL1 1385 aa6.68□□□□□ -1.34
ATXN3-243ENST00000556671 IFT172Q9UG01 1749 aa6.67□□□□□ -1.34
ATXN3-243ENST00000556671 GFRA2O00451 464 aa6.67□□□□□ -1.34
ATXN3-243ENST00000556671 ZNF865P0CJ78 1059 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-243ENST00000556671 ETF1P62495 437 aaKnown RBP6.67□□□□□ -1.34
ATXN3-243ENST00000556671 IKZF1Q13422 519 aa6.67□□□□□ -1.34
ATXN3-243ENST00000556671 TMEM132EQ6IEE7 984 aa6.67□□□□□ -1.34
ATXN3-243ENST00000556671 AGMOQ6ZNB7 445 aa6.67□□□□□ -1.34
ATXN3-243ENST00000556671 HID1Q8IV36 788 aa6.67□□□□□ -1.34
ATXN3-243ENST00000556671 FLAD1Q8NFF5 587 aa6.67□□□□□ -1.34
ATXN3-243ENST00000556671 FAM168AQ92567 244 aa6.67□□□□□ -1.34
ATXN3-243ENST00000556671 MIPEPQ99797 713 aa6.67□□□□□ -1.34
ATXN3-243ENST00000556671 TACC3Q9Y6A5 838 aa6.67□□□□□ -1.34
ATXN3-243ENST00000556671 CNTNAP4Q9C0A0 1308 aa6.67□□□□□ -1.34
ATXN3-243ENST00000556671 ZFYVE9O95405 1425 aa6.67□□□□□ -1.34
ATXN3-243ENST00000556671 CPS1P31327 1500 aa6.66□□□□□ -1.34
ATXN3-243ENST00000556671 NEXMIFQ5QGS0 1516 aa6.66□□□□□ -1.34
ATXN3-243ENST00000556671 C8AP07357 584 aa6.66□□□□□ -1.34
ATXN3-243ENST00000556671 LIG3P49916 1009 aa6.66□□□□□ -1.34
ATXN3-243ENST00000556671 ZP2Q05996 745 aa6.66□□□□□ -1.34
ATXN3-243ENST00000556671 SEPT6Q14141 434 aa6.66□□□□□ -1.34
ATXN3-243ENST00000556671 PRDM7Q9NQW5 492 aa6.66□□□□□ -1.34
ATXN3-243ENST00000556671 SEMA3GQ9NS98 782 aa6.66□□□□□ -1.34
ATXN3-243ENST00000556671 TPX2Q9ULW0 747 aaKnown RBP6.66□□□□□ -1.34
ATXN3-243ENST00000556671 ADGRF5Q8IZF2 1346 aa6.66□□□□□ -1.34
ATXN3-243ENST00000556671 RGPD8O14715 1765 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-243ENST00000556671 PRR33A8MZF0 331 aa6.65□□□□□ -1.34
ATXN3-243ENST00000556671 CST3P01034 146 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-243ENST00000556671 ATF3P18847 181 aa6.65□□□□□ -1.34
ATXN3-243ENST00000556671 LMNB1P20700 586 aa6.65□□□□□ -1.34
ATXN3-243ENST00000556671 GRK4P32298 578 aa6.65□□□□□ -1.34
ATXN3-243ENST00000556671 SFRP5Q5T4F7 317 aa6.65□□□□□ -1.34
ATXN3-243ENST00000556671 MEI1Q5TIA1 1274 aa6.65□□□□□ -1.34
ATXN3-243ENST00000556671 LETMD1Q6P1Q0 360 aa6.65□□□□□ -1.34
ATXN3-243ENST00000556671 MFSD4AQ8N468 514 aa6.65□□□□□ -1.34
ATXN3-243ENST00000556671 RIN3Q8TB24 985 aa6.65□□□□□ -1.34
ATXN3-243ENST00000556671 ANKRD30BQ9BXX2 1392 aa6.65□□□□□ -1.35
ATXN3-243ENST00000556671 TFE3P19532 575 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-243ENST00000556671 SAFB2Q14151 953 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATXN3-243ENST00000556671 MAP3K11Q16584 847 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 PRAMEF13Q5VWM6 474 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 ZNF746Q6NUN9 644 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-243ENST00000556671 NPAS4Q8IUM7 802 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 TMEM40Q8WWA1 233 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 HSPA12BQ96MM6 686 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 MIR1-1HGQ9H1L0 117 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 LMCD1Q9NZU5 365 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 PARP2Q9UGN5 583 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 CAPN6Q9Y6Q1 641 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 TMEM94Q12767 1356 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 LRRC7Q96NW7 1537 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 ALKQ9UM73 1620 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 NRXN3Q9Y4C0 1643 aa6.64□□□□□ -1.35
ATXN3-243ENST00000556671 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-243ENST00000556671 FAM155AB1AL88 458 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-243ENST00000556671 METP08581 1390 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms