RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 FANCCQ00597 558 aa11.56□□□□□ -0.56
TMEM260-211ENST00000556648 MYL5Q02045 173 aa11.56□□□□□ -0.56
TMEM260-211ENST00000556648 TMC6Q7Z403 805 aa11.56□□□□□ -0.56
TMEM260-211ENST00000556648 LRRC8AQ8IWT6 810 aa11.56□□□□□ -0.56
TMEM260-211ENST00000556648 ELOA2Q8IYF1 753 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-211ENST00000556648 TRMT44Q8IYL2 757 aaKnown RBP11.56□□□□□ -0.56
TMEM260-211ENST00000556648 TTF2Q9UNY4 1162 aaKnown RBP11.56□□□□□ -0.56
TMEM260-211ENST00000556648 PCDHAC2Q9Y5I4 1007 aa11.56□□□□□ -0.56
TMEM260-211ENST00000556648 MORC2Q9Y6X9 1032 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-211ENST00000556648 KLRF2D3W0D1 207 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 M0R2N6 131 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 CCZ1BP86790 482 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 CCZ1P86791 482 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-211ENST00000556648 MORC3Q14149 939 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 HSP90AA4PQ58FG1 418 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 CCDC178Q5BJE1 867 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 NT5DC1Q5TFE4 455 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 CERS3Q8IU89 383 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 SLF2Q8IX21 1173 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.56
TMEM260-211ENST00000556648 MED15Q96RN5 788 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 ZC3H12CQ9C0D7 883 aaKnown RBP11.55□□□□□ -0.56
TMEM260-211ENST00000556648 DBNDD1Q9H9R9 158 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 FANCLQ9NW38 375 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 ZNF219Q9P2Y4 722 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-211ENST00000556648 PCDHA6Q9UN73 950 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 PCDHA4Q9UN74 947 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 PCDHA8Q9Y5H6 950 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 ZNF646O15015 1829 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-211ENST00000556648 FRMPD2Q68DX3 1309 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-211ENST00000556648 USP17L5A8MUK1 530 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 AKR1B1P15121 316 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 EIF6P56537 245 aaKnown RBP11.55□□□□□ -0.56
TMEM260-211ENST00000556648 C4orf32Q8N8J7 132 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 STAMQ92783 540 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 SMARCE1Q969G3 411 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 FERMT2Q96AC1 680 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 PAGE5Q96GU1 130 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 PARP3Q9Y6F1 533 aa11.55□□□□□ -0.56
TMEM260-211ENST00000556648 MYH8P13535 1937 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 SLX4Q8IY92 1834 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 USP27XA6NNY8 438 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 TMEM232C9JQI7 657 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 CALML3P27482 149 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 GNAQP50148 359 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 TPM4P67936 248 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 GABPAQ06546 454 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 SH3RF1Q7Z6J0 888 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 HOMER1Q86YM7 354 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 C2CD5Q86YS7 1000 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 LRRC47Q8N1G4 583 aaKnown RBP11.54□□□□□ -0.56
TMEM260-211ENST00000556648 MASTLQ96GX5 879 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 SH3GLB2Q9NR46 395 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 USP40Q9NVE5 1235 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 SCN9AQ15858 1988 aa11.54□□□□□ -0.56
TMEM260-211ENST00000556648 BMP15O95972 392 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 PARP1P09874 1014 aaKnown RBP11.53□□□□□ -0.56
TMEM260-211ENST00000556648 PDE6BP35913 854 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 NT5C2P49902 561 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 INF2Q27J81 1249 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 CDC42EP5Q6NZY7 148 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 ARMCX5Q6P1M9 558 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 UBA5Q9GZZ9 404 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 TMEM60Q9H2L4 133 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 ZNF287Q9HBT7 754 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 INTS13Q9NVM9 706 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 BARHL2Q9NY43 387 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 HOOK1Q9UJC3 728 aaKnown RBP11.53□□□□□ -0.56
TMEM260-211ENST00000556648 SIPA1L1O43166 1804 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 SLFN14P0C7P3 912 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 TOP1P11387 765 aaKnown RBP11.53□□□□□ -0.56
TMEM260-211ENST00000556648 CDC25AP30304 524 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 CHRNA5P30532 468 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 TRAPPC10P48553 1259 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 NOVP48745 357 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 TERF1P54274 439 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 CACNB3P54284 484 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 NFIAQ12857 509 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 E2F4Q16254 413 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 SHROOM1Q2M3G4 852 aaPredicted RBP11.53□□□□□ -0.56
TMEM260-211ENST00000556648 ZFPM1Q8IX07 1006 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 SMYD4Q8IYR2 804 aaPredicted RBP11.53□□□□□ -0.56
TMEM260-211ENST00000556648 DAGLBQ8NCG7 672 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 SPATA20Q8TB22 786 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 SPZ1Q9BXG8 430 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 OSBPL5Q9H0X9 879 aaPredicted RBP11.53□□□□□ -0.56
TMEM260-211ENST00000556648 VAT1LQ9HCJ6 419 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 PLIN4Q96Q06 1357 aa11.53□□□□□ -0.56
TMEM260-211ENST00000556648 IGKV6D-41A0A0C4DH26 115 aa11.52□□□□□ -0.56
TMEM260-211ENST00000556648 PP2D1A8MPX8 630 aa11.52□□□□□ -0.56
TMEM260-211ENST00000556648 SKILP12757 684 aa11.52□□□□□ -0.56
TMEM260-211ENST00000556648 CD44P16070 742 aaKnown RBP11.52□□□□□ -0.56
TMEM260-211ENST00000556648 ALDH1B1P30837 517 aa11.52□□□□□ -0.56
TMEM260-211ENST00000556648 GOLGA8FQ08AF8 430 aa11.52□□□□□ -0.56
TMEM260-211ENST00000556648 GOLGA8DPQ0D2H9 430 aa11.52□□□□□ -0.56
TMEM260-211ENST00000556648 DPYDQ12882 1025 aa11.52□□□□□ -0.56
TMEM260-211ENST00000556648 APOBEC3HQ6NTF7 200 aaKnown RBP11.52□□□□□ -0.56
TMEM260-211ENST00000556648 TSC1Q92574 1164 aa11.52□□□□□ -0.56
TMEM260-211ENST00000556648 C16orf45Q96MC5 204 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms