RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 SWAP70Q9UH65 585 aa9.26□□□□□ -0.93
HNRNPC-226ENST00000556628 USP17L15C9J2P7 530 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 USP17L13C9JLJ4 530 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 USP17L11C9JVI0 530 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 USP17L18D6R9N7 530 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 USP17L22D6RA61 530 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 USP17L17D6RBQ6 530 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 USP17L19D6RCP7 530 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 USP17L20D6RJB6 530 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 MBD4O95243 580 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 GJB1P08034 283 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 CAPN2P17655 700 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 USP17L24Q0WX57 530 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 UBE3CQ15386 1083 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 SHROOM1Q2M3G4 852 aaPredicted RBP9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 LRRFIP1Q32MZ4 808 aaKnown RBP9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 GPRC5AQ8NFJ5 357 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 C12orf42Q96LP6 360 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 PAGR1Q9BTK6 254 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 KIAA1683Q9H0B3 1180 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 DCTPP1Q9H773 170 aa9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 DCP1AQ9NPI6 582 aaPredicted RBP9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 BAZ2AQ9UIF9 1905 aaKnown RBP9.25□□□□□ -0.93
HNRNPC-226ENST00000556628 GPR37O15354 613 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 INHAP05111 366 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 ELNP15502 786 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 MAPK4P31152 587 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 SHMT1P34896 483 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 GJA8P48165 433 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 GABPAQ06546 454 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 TMEM179Q6ZVK1 233 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 U2AF1L4Q8WU68 220 aaKnown RBP9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 NUDT12Q9BQG2 462 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 HTATIP2Q9BUP3 242 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 SH2D4AQ9H788 454 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 SLC24A3Q9HC58 644 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 ARHGEF10LQ9HCE6 1279 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 SLC4A4Q9Y6R1 1079 aa9.24□□□□□ -0.93
HNRNPC-226ENST00000556628 DOCK3Q8IZD9 2030 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 ERC2O15083 957 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 PRKAB2O43741 272 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 GLRX3O76003 335 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 SGPL1O95470 568 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 TFRCP02786 760 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 HMGCRP04035 888 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 VCAM1P19320 739 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 RRP1P56182 461 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 ERVK-9P63128 1117 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 ERVK-24P63145 666 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 CCNA1P78396 465 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 SEPT2Q15019 361 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 TRMT44Q8IYL2 757 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 KBTBD3Q8NAB2 608 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 SOCS4Q8WXH5 440 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 CCDC17Q96LX7 622 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 UNC93B1Q9H1C4 597 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 RABGAP1Q9Y3P9 1069 aa9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 KIAA0100Q14667 2235 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-226ENST00000556628 PDE4DIPQ5VU43 2346 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 USP17L12C9JPN9 530 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 USP17L21D6R901 530 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 ZFYP08048 801 aaPredicted RBP9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 CYP2D6P10635 497 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 CYP2B6P20813 491 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 PRSS12P56730 875 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 SLFNL1Q499Z3 407 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 WDR78Q5VTH9 848 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 CATSPERGQ6ZRH7 1159 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 PLEKHH3Q7Z736 793 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 ACER1Q8TDN7 264 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 DPF3Q92784 378 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 SHISA4Q96DD7 197 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 DYNLL2Q96FJ2 89 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.22□□□□□ -0.939e-29■■■■□ 21.1
HNRNPC-226ENST00000556628 RPAP3Q9H6T3 665 aaPredicted RBP9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 TXNRD2Q9NNW7 524 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 HMX1Q9NP08 348 aaPredicted RBP9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 RBPJLQ9UBG7 517 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 ARPP21Q9UBL0 812 aaPredicted RBP9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 GJD2Q9UKL4 321 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 TNRC18O15417 2968 aaPredicted RBP9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 TTC41PQ6P2S7 1318 aa9.22□□□□□ -0.93
HNRNPC-226ENST00000556628 PLXNB2O15031 1838 aa9.21□□□□□ -0.93
HNRNPC-226ENST00000556628 RNF113AO15541 343 aaKnown RBP9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 FARP2O94887 1054 aaPredicted RBP9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 GNAT2P19087 354 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 RGS2P41220 211 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 CDK8P49336 464 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 ICA1Q05084 483 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 COG2Q14746 738 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 Q3C1V9 767 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 C12orf60Q5U649 245 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 C16orf86Q6ZW13 317 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 GPR142Q7Z601 462 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 SLC44A5Q8NCS7 719 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 APPBP2Q92624 585 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 DEFB118Q96PH6 123 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 TANGO6Q9C0B7 1094 aa9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 PUS7LQ9H0K6 701 aaKnown RBP9.21□□□□□ -0.94
HNRNPC-226ENST00000556628 HOXC10Q9NYD6 342 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms