RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 NAPBQ9H115 298 aa12.62□□□□□ -0.39
SPTLC2-205ENST00000556607 RBM27Q9P2N5 1060 aaKnown RBP12.62□□□□□ -0.39
SPTLC2-205ENST00000556607 CLIP2Q9UDT6 1046 aa12.62□□□□□ -0.39
SPTLC2-205ENST00000556607 ISY1Q9ULR0 285 aaKnown RBP12.62□□□□□ -0.39
SPTLC2-205ENST00000556607 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
SPTLC2-205ENST00000556607 SLC3A2P08195 630 aaKnown RBP12.61□□□□□ -0.39
SPTLC2-205ENST00000556607 TSPY3P0CV98 308 aa12.61□□□□□ -0.39
SPTLC2-205ENST00000556607 TSPY8P0CW00 308 aa12.61□□□□□ -0.39
SPTLC2-205ENST00000556607 FCER1AP12319 257 aa12.61□□□□□ -0.39
SPTLC2-205ENST00000556607 FXR1P51114 621 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPTLC2-205ENST00000556607 SHCBP1Q8NEM2 672 aa12.61□□□□□ -0.39
SPTLC2-205ENST00000556607 MROH8Q9H579 483 aa12.61□□□□□ -0.39
SPTLC2-205ENST00000556607 EPB41L4AQ9HCS5 686 aaPredicted RBP12.61□□□□□ -0.39
SPTLC2-205ENST00000556607 FBXO28Q9NVF7 368 aa12.61□□□□□ -0.39
SPTLC2-205ENST00000556607 ZMYND8Q9ULU4 1186 aaPredicted RBP12.61□□□□□ -0.39
SPTLC2-205ENST00000556607 GREB1LQ9C091 1923 aaPredicted RBP12.6□□□□□ -0.39
SPTLC2-205ENST00000556607 PLXNA1Q9UIW2 1896 aa12.6□□□□□ -0.39
SPTLC2-205ENST00000556607 SLC25A27O95847 323 aa12.6□□□□□ -0.39
SPTLC2-205ENST00000556607 SYN1P17600 705 aa12.6□□□□□ -0.39
SPTLC2-205ENST00000556607 PDE4BQ07343 736 aa12.6□□□□□ -0.39
SPTLC2-205ENST00000556607 TMEM132BQ14DG7 1078 aa12.6□□□□□ -0.39
SPTLC2-205ENST00000556607 MMP19Q99542 508 aa12.6□□□□□ -0.39
SPTLC2-205ENST00000556607 NUP88Q99567 741 aaPredicted RBP12.6□□□□□ -0.39
SPTLC2-205ENST00000556607 NYAP2Q9P242 653 aa12.6□□□□□ -0.39
SPTLC2-205ENST00000556607 STAP2Q9UGK3 403 aa12.6□□□□□ -0.39
SPTLC2-205ENST00000556607 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
SPTLC2-205ENST00000556607 ZNF236Q9UL36 1845 aa12.6□□□□□ -0.39
SPTLC2-205ENST00000556607 F5H6K3 240 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 VWA5AO00534 786 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 MSCO60682 206 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 HOXC6P09630 235 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 STAT3P40763 770 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 KLRC3Q07444 240 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 KCTD2Q14681 263 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 FAM47AQ5JRC9 791 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 ZMYM1Q5SVZ6 1142 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 ANO1Q5XXA6 986 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 LHX8Q68G74 356 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 CCDC129Q6ZRS4 1044 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 CHMP4CQ96CF2 233 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 EVI5LQ96CN4 794 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 SENP6Q9GZR1 1112 aaPredicted RBP12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 PPP1R9AQ9ULJ8 1098 aa12.59□□□□□ -0.39
SPTLC2-205ENST00000556607 ROBO3Q96MS0 1386 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 TRIM6-TRIM34B2RNG4 842 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 COBLO75128 1261 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 MNX1P50219 401 aaPredicted RBP12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 TFAP4Q01664 338 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 PPARAQ07869 468 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 PRAMEF19Q5SWL8 479 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 OLFML2BQ68BL8 750 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 B4GALNT3Q6L9W6 998 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 ABRAQ8N0Z2 381 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 CPXCR1Q8N123 301 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 RILPL2Q969X0 211 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 KIFC2Q96AC6 838 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 SLF1Q9BQI6 1058 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 PFASO15067 1338 aa12.58□□□□□ -0.4
SPTLC2-205ENST00000556607 TSPY2A6NKD2 308 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 ZBED4O75132 1171 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 TTLL1O95922 423 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 NDUFB10O96000 172 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 PGK2P07205 417 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 CYBAP13498 195 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 CTDSPL2Q05D32 466 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 IKQ13123 557 aaPredicted RBP12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 HDAC1Q13547 482 aaPredicted RBP12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 GJC2Q5T442 439 aaPredicted RBP12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 SNRNP48Q6IEG0 339 aaKnown RBP12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 RIOX2Q8IUF8 465 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 LRRC47Q8N1G4 583 aaKnown RBP12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 PRPF38AQ8NAV1 312 aaKnown RBP12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 TRPV1Q8NER1 839 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 DDX11Q96FC9 970 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 CEP95Q96GE4 821 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 MAML3Q96JK9 1138 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 LNPKQ9C0E8 428 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 RWDD1Q9H446 243 aaPredicted RBP12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 TOMM22Q9NS69 142 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 ADAMTS5Q9UNA0 930 aa12.57□□□□□ -0.4
SPTLC2-205ENST00000556607 KBTBD13C9JR72 458 aa12.56□□□□□ -0.4
SPTLC2-205ENST00000556607 COPB2P35606 906 aa12.56□□□□□ -0.4
SPTLC2-205ENST00000556607 ATN1P54259 1190 aaPredicted RBP12.56□□□□□ -0.4
SPTLC2-205ENST00000556607 PDE1AP54750 535 aa12.56□□□□□ -0.4
SPTLC2-205ENST00000556607 LRRC26Q2I0M4 334 aa12.56□□□□□ -0.4
SPTLC2-205ENST00000556607 ARRDC4Q8NCT1 418 aa12.56□□□□□ -0.4
SPTLC2-205ENST00000556607 MTMR4Q9NYA4 1195 aa12.56□□□□□ -0.4
SPTLC2-205ENST00000556607 MTMR7Q9Y216 660 aa12.56□□□□□ -0.4
SPTLC2-205ENST00000556607 IGKV6D-41A0A0C4DH26 115 aa12.55□□□□□ -0.4
SPTLC2-205ENST00000556607 SEPT4O43236 478 aa12.55□□□□□ -0.4
SPTLC2-205ENST00000556607 RANBP6O60518 1105 aaKnown RBP12.55□□□□□ -0.4
SPTLC2-205ENST00000556607 BMP3P12645 472 aa12.55□□□□□ -0.4
SPTLC2-205ENST00000556607 SLFN13Q68D06 897 aa12.55□□□□□ -0.4
SPTLC2-205ENST00000556607 NEDD1Q8NHV4 660 aa12.55□□□□□ -0.4
SPTLC2-205ENST00000556607 TEX13BQ9BXU2 312 aa12.55□□□□□ -0.4
SPTLC2-205ENST00000556607 RAVER2Q9HCJ3 691 aaKnown RBP12.55□□□□□ -0.4
SPTLC2-205ENST00000556607 HELLSQ9NRZ9 838 aa12.55□□□□□ -0.4
SPTLC2-205ENST00000556607 FEM1BQ9UK73 627 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms