RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 YTHDC2Q9H6S0 1430 aaKnown RBP5.07□□□□□ -1.6
TGFB3-205ENST00000556507 IL16Q14005 1332 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 ARHGEF28Q8N1W1 1705 aaKnown RBP5.07□□□□□ -1.6
TGFB3-205ENST00000556507 ANKRD33BA6NCL7 494 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 DCDC2CA8MYV0 355 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 FYB1O15117 783 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 PPM1GO15355 546 aaPredicted RBP5.07□□□□□ -1.6
TGFB3-205ENST00000556507 PRPF40AO75400 957 aaKnown RBP5.07□□□□□ -1.6
TGFB3-205ENST00000556507 CELA3AP09093 270 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 HSP90B1P14625 803 aaKnown RBP5.07□□□□□ -1.6
TGFB3-205ENST00000556507 TAL1P17542 331 aaPredicted RBP5.07□□□□□ -1.6
TGFB3-205ENST00000556507 EIF4BP23588 611 aaKnown RBP5.07□□□□□ -1.6
TGFB3-205ENST00000556507 COL19A1Q14993 1142 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 EAPPQ56P03 285 aaPredicted RBP5.07□□□□□ -1.6
TGFB3-205ENST00000556507 PPM1JQ5JR12 505 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 PCNX4Q63HM2 1172 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 SCARA3Q6AZY7 606 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 SV2BQ7L1I2 683 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 C12orf40Q86WS4 652 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 ABI1Q8IZP0 508 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 FLCNQ8NFG4 579 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 PLEKHF1Q96S99 279 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 USP35Q9P2H5 1018 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 PCDHA4Q9UN74 947 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 PREX1Q8TCU6 1659 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 PTPRMP28827 1452 aa5.07□□□□□ -1.6
TGFB3-205ENST00000556507 A0A1W2PP64 1363 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 SHPRHQ149N8 1683 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 MAPK8IP3Q9UPT6 1336 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 ALKQ9UM73 1620 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 DIAPH1O60610 1272 aaKnown RBP5.06□□□□□ -1.6
TGFB3-205ENST00000556507 LEFTY1O75610 366 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 TMPOP42166 694 aaKnown RBP5.06□□□□□ -1.6
TGFB3-205ENST00000556507 SAFB2Q14151 953 aaKnown RBP eCLIP5.06□□□□□ -1.6
TGFB3-205ENST00000556507 RASIP1Q5U651 963 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 ARHGAP27Q6ZUM4 889 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 RGS22Q8NE09 1264 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 DUSP9Q99956 384 aaKnown RBP5.06□□□□□ -1.6
TGFB3-205ENST00000556507 DUSP23Q9BVJ7 150 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 RWDD1Q9H446 243 aaPredicted RBP5.06□□□□□ -1.6
TGFB3-205ENST00000556507 ADGRE2Q9UHX3 823 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 RRP7AQ9Y3A4 280 aaKnown RBP5.06□□□□□ -1.6
TGFB3-205ENST00000556507 AK5Q9Y6K8 562 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 DLC1Q96QB1 1528 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 IQSEC2Q5JU85 1478 aa5.06□□□□□ -1.6
TGFB3-205ENST00000556507 PNPLA6Q8IY17 1366 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 U2SURPO15042 1029 aaKnown RBP5.05□□□□□ -1.6
TGFB3-205ENST00000556507 FANCGO15287 622 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 PAX4O43316 350 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 IGHDP01880 384 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 CALD1Q05682 793 aaKnown RBP5.05□□□□□ -1.6
TGFB3-205ENST00000556507 ZKSCAN2Q63HK3 967 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 NFXL1Q6ZNB6 911 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 CDC37L1Q7L3B6 337 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 TOP6BLQ8N6T0 577 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 FAM181AQ8N9Y4 354 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 NETO1Q8TDF5 533 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 PANK1Q8TE04 598 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 FRAT1Q92837 279 aaPredicted RBP5.05□□□□□ -1.6
TGFB3-205ENST00000556507 ZNF428Q96B54 188 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 ELMO3Q96BJ8 720 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 SLC5A6Q9Y289 635 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 ARHGEF40Q8TER5 1519 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 CLTCQ00610 1675 aaKnown RBP5.05□□□□□ -1.6
TGFB3-205ENST00000556507 RIMS2Q9UQ26 1411 aa5.05□□□□□ -1.6
TGFB3-205ENST00000556507 ZMYM3Q14202 1370 aa5.04□□□□□ -1.6
TGFB3-205ENST00000556507 IPO8O15397 1037 aaKnown RBP5.04□□□□□ -1.6
TGFB3-205ENST00000556507 LMNB1P20700 586 aa5.04□□□□□ -1.6
TGFB3-205ENST00000556507 RIPK4P57078 832 aa5.04□□□□□ -1.6
TGFB3-205ENST00000556507 RING1Q06587 406 aa5.04□□□□□ -1.6
TGFB3-205ENST00000556507 CCDC85BQ15834 202 aaPredicted RBP5.04□□□□□ -1.6
TGFB3-205ENST00000556507 ZBTB37Q5TC79 503 aa5.04□□□□□ -1.6
TGFB3-205ENST00000556507 TTBK2Q6IQ55 1244 aa5.04□□□□□ -1.6
TGFB3-205ENST00000556507 STK11IPQ8N1F8 1099 aa5.04□□□□□ -1.6
TGFB3-205ENST00000556507 PLD6Q8N2A8 252 aaKnown RBP5.04□□□□□ -1.6
TGFB3-205ENST00000556507 AGBL5Q8NDL9 886 aa5.04□□□□□ -1.6
TGFB3-205ENST00000556507 BCL7CQ8WUZ0 217 aaPredicted RBP5.04□□□□□ -1.6
TGFB3-205ENST00000556507 GZF1Q9H116 711 aaPredicted RBP5.04□□□□□ -1.6
TGFB3-205ENST00000556507 CHMP4BQ9H444 224 aaKnown RBP5.04□□□□□ -1.6
TGFB3-205ENST00000556507 PAK6Q9NQU5 681 aaPredicted RBP5.04□□□□□ -1.6
TGFB3-205ENST00000556507 RNF19AQ9NV58 838 aa5.04□□□□□ -1.6
TGFB3-205ENST00000556507 A2ML1A8K2U0 1454 aa5.04□□□□□ -1.6
TGFB3-205ENST00000556507 SPATA31D1Q6ZQQ2 1576 aa5.04□□□□□ -1.6
TGFB3-205ENST00000556507 DIP2BQ9P265 1576 aa5.04□□□□□ -1.6
TGFB3-205ENST00000556507 ATP7BP35670 1465 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 CD163L1Q9NR16 1453 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 NTF4P34130 210 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 DEKP35659 375 aaKnown RBP5.03□□□□□ -1.6
TGFB3-205ENST00000556507 RGS3P49796 1198 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 PTPN11Q06124 597 aaPredicted RBP5.03□□□□□ -1.6
TGFB3-205ENST00000556507 EXOSC9Q06265 439 aaKnown RBP5.03□□□□□ -1.6
TGFB3-205ENST00000556507 BNIP3Q12983 259 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 INPP5AQ14642 412 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 MVPQ14764 893 aaKnown RBP5.03□□□□□ -1.6
TGFB3-205ENST00000556507 ALDH1L2Q3SY69 923 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 HDXQ7Z353 690 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 KCT2Q8NC54 265 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 ZNF507Q8TCN5 953 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 MISP3Q96FF7 219 aa5.03□□□□□ -1.6
TGFB3-205ENST00000556507 MKNK2Q9HBH9 465 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms