RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 MYH7P12883 1935 aa18.62■□□□□ 0.57
SUPT16H-205ENST00000556217 PLXNA1Q9UIW2 1896 aa18.61■□□□□ 0.57
SUPT16H-205ENST00000556217 MBD4O95243 580 aa18.61■□□□□ 0.57
SUPT16H-205ENST00000556217 AKR1B1P15121 316 aa18.61■□□□□ 0.57
SUPT16H-205ENST00000556217 ADCYAP1R1P41586 468 aa18.61■□□□□ 0.57
SUPT16H-205ENST00000556217 SNX17Q15036 470 aa18.61■□□□□ 0.57
SUPT16H-205ENST00000556217 SHHQ15465 462 aa18.61■□□□□ 0.57
SUPT16H-205ENST00000556217 TRIM60Q495X7 471 aa18.61■□□□□ 0.57
SUPT16H-205ENST00000556217 SAMD1Q6SPF0 538 aaPredicted RBP18.61■□□□□ 0.57
SUPT16H-205ENST00000556217 BCL11AQ9H165 835 aa18.61■□□□□ 0.57
SUPT16H-205ENST00000556217 PAG1Q9NWQ8 432 aa18.61■□□□□ 0.57
SUPT16H-205ENST00000556217 SMCHD1A6NHR9 2005 aa18.61■□□□□ 0.57
SUPT16H-205ENST00000556217 RAB11FIP3O75154 756 aa18.6■□□□□ 0.57
SUPT16H-205ENST00000556217 FOSL2P15408 326 aa18.6■□□□□ 0.57
SUPT16H-205ENST00000556217 ADD2P35612 726 aa18.6■□□□□ 0.57
SUPT16H-205ENST00000556217 SMAD3P84022 425 aaKnown RBP18.6■□□□□ 0.57
SUPT16H-205ENST00000556217 LRRC41Q15345 812 aa18.6■□□□□ 0.57
SUPT16H-205ENST00000556217 PRAMEF19Q5SWL8 479 aa18.6■□□□□ 0.57
SUPT16H-205ENST00000556217 C1orf53Q5VUE5 145 aa18.6■□□□□ 0.57
SUPT16H-205ENST00000556217 CLEC10AQ8IUN9 316 aa18.6■□□□□ 0.57
SUPT16H-205ENST00000556217 SIAH1Q8IUQ4 282 aa18.6■□□□□ 0.57
SUPT16H-205ENST00000556217 RARBP10826 455 aa18.59■□□□□ 0.57
SUPT16H-205ENST00000556217 CDK8P49336 464 aa18.59■□□□□ 0.57
SUPT16H-205ENST00000556217 KCTD2Q14681 263 aa18.59■□□□□ 0.57
SUPT16H-205ENST00000556217 TMEM132BQ14DG7 1078 aa18.59■□□□□ 0.57
SUPT16H-205ENST00000556217 C12orf60Q5U649 245 aa18.59■□□□□ 0.57
SUPT16H-205ENST00000556217 BADQ92934 168 aa18.59■□□□□ 0.57
SUPT16H-205ENST00000556217 FERMT2Q96AC1 680 aa18.59■□□□□ 0.57
SUPT16H-205ENST00000556217 MMP19Q99542 508 aa18.59■□□□□ 0.57
SUPT16H-205ENST00000556217 KANSL2Q9H9L4 492 aa18.59■□□□□ 0.57
SUPT16H-205ENST00000556217 GOPCQ9HD26 462 aa18.59■□□□□ 0.57
SUPT16H-205ENST00000556217 XPNPEP3Q9NQH7 507 aa18.59■□□□□ 0.57
SUPT16H-205ENST00000556217 TNFRSF10AO00220 468 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 PRKAB2O43741 272 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 ATP5JP18859 108 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 COPB2P35606 906 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 FAM47AQ5JRC9 791 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 TJAP1Q5JTD0 557 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 C16orf86Q6ZW13 317 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 RNF180Q86T96 592 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 RIOX2Q8IUF8 465 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 TTYH1Q9H313 450 aaPredicted RBP18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 BOLA2Q9H3K6 86 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 PDLIM7Q9NR12 457 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 ADAMTS5Q9UNA0 930 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 PHF24Q9UPV7 400 aa18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 DIS3Q9Y2L1 958 aaKnown RBP18.58■□□□□ 0.56
SUPT16H-205ENST00000556217 USP17L12C9JPN9 530 aa18.57■□□□□ 0.56
SUPT16H-205ENST00000556217 USP17L21D6R901 530 aa18.57■□□□□ 0.56
SUPT16H-205ENST00000556217 EEF2P13639 858 aaKnown RBP18.57■□□□□ 0.56
SUPT16H-205ENST00000556217 C9orf50Q5SZB4 431 aa18.57■□□□□ 0.56
SUPT16H-205ENST00000556217 TINF2Q9BSI4 451 aa18.57■□□□□ 0.56
SUPT16H-205ENST00000556217 CHMP4BQ9H444 224 aaKnown RBP18.57■□□□□ 0.56
SUPT16H-205ENST00000556217 DDX19BQ9UMR2 479 aa18.57■□□□□ 0.56
SUPT16H-205ENST00000556217 NCOR1O75376 2440 aa18.57■□□□□ 0.56
SUPT16H-205ENST00000556217 MUC3AQ02505 3323 aa18.56■□□□□ 0.56
SUPT16H-205ENST00000556217 CYP2D7A0A087X1C5 515 aa18.56■□□□□ 0.56
SUPT16H-205ENST00000556217 STAT3P40763 770 aa18.56■□□□□ 0.56
SUPT16H-205ENST00000556217 UBE3CQ15386 1083 aa18.56■□□□□ 0.56
SUPT16H-205ENST00000556217 ZSCAN25Q6NSZ9 544 aa18.56■□□□□ 0.56
SUPT16H-205ENST00000556217 HAUS7Q99871 368 aa18.56■□□□□ 0.56
SUPT16H-205ENST00000556217 TACC3Q9Y6A5 838 aa18.56■□□□□ 0.56
SUPT16H-205ENST00000556217 SLC4A4Q9Y6R1 1079 aa18.56■□□□□ 0.56
SUPT16H-205ENST00000556217 ROBO3Q96MS0 1386 aa18.55■□□□□ 0.56
SUPT16H-205ENST00000556217 CDH23Q9H251 3354 aa18.55■□□□□ 0.56
SUPT16H-205ENST00000556217 TMEM265A0A087WTH1 108 aa18.55■□□□□ 0.56
SUPT16H-205ENST00000556217 TRIM43BA6NCK2 446 aa18.55■□□□□ 0.56
SUPT16H-205ENST00000556217 VWA5AO00534 786 aa18.55■□□□□ 0.56
SUPT16H-205ENST00000556217 RAD21O60216 631 aa18.55■□□□□ 0.56
SUPT16H-205ENST00000556217 PGK2P07205 417 aa18.55■□□□□ 0.56
SUPT16H-205ENST00000556217 TLE2Q04725 743 aa18.55■□□□□ 0.56
SUPT16H-205ENST00000556217 TRIM43Q96BQ3 446 aaPredicted RBP18.55■□□□□ 0.56
SUPT16H-205ENST00000556217 FBXO28Q9NVF7 368 aa18.55■□□□□ 0.56
SUPT16H-205ENST00000556217 PPP1R9AQ9ULJ8 1098 aa18.55■□□□□ 0.56
SUPT16H-205ENST00000556217 CNPY2Q9Y2B0 182 aa18.55■□□□□ 0.56
SUPT16H-205ENST00000556217 ZBED9Q6R2W3 1325 aa18.54■□□□□ 0.56
SUPT16H-205ENST00000556217 CLTBP09497 229 aa18.54■□□□□ 0.56
SUPT16H-205ENST00000556217 AKR1A1P14550 325 aa18.54■□□□□ 0.56
SUPT16H-205ENST00000556217 ZNF792Q3KQV3 632 aa18.54■□□□□ 0.56
SUPT16H-205ENST00000556217 SLFNL1Q499Z3 407 aa18.54■□□□□ 0.56
SUPT16H-205ENST00000556217 SH3RF1Q7Z6J0 888 aa18.54■□□□□ 0.56
SUPT16H-205ENST00000556217 SIRT2Q8IXJ6 389 aa18.54■□□□□ 0.56
SUPT16H-205ENST00000556217 ZBTB40Q9NUA8 1239 aa18.54■□□□□ 0.56
SUPT16H-205ENST00000556217 PGK1P00558 417 aa18.53■□□□□ 0.56
SUPT16H-205ENST00000556217 FAM83BQ5T0W9 1011 aa18.53■□□□□ 0.56
SUPT16H-205ENST00000556217 CTR9Q6PD62 1173 aa18.53■□□□□ 0.56
SUPT16H-205ENST00000556217 MSL3Q8N5Y2 521 aaKnown RBP18.53■□□□□ 0.56
SUPT16H-205ENST00000556217 ARPP21Q9UBL0 812 aaPredicted RBP18.53■□□□□ 0.56
SUPT16H-205ENST00000556217 ZNF214Q9UL59 606 aaPredicted RBP18.53■□□□□ 0.56
SUPT16H-205ENST00000556217 A0A1W2PQ45 241 aaPredicted RBP18.52■□□□□ 0.56
SUPT16H-205ENST00000556217 A0A1W2PQY0 241 aa18.52■□□□□ 0.56
SUPT16H-205ENST00000556217 RAG1P15918 1043 aa18.52■□□□□ 0.56
SUPT16H-205ENST00000556217 RNPC3Q96LT9 517 aaKnown RBP18.52■□□□□ 0.56
SUPT16H-205ENST00000556217 SLF1Q9BQI6 1058 aa18.52■□□□□ 0.56
SUPT16H-205ENST00000556217 TSEN34Q9BSV6 310 aaKnown RBP18.52■□□□□ 0.56
SUPT16H-205ENST00000556217 TEX13BQ9BXU2 312 aa18.52■□□□□ 0.56
SUPT16H-205ENST00000556217 GREB1LQ9C091 1923 aaPredicted RBP18.52■□□□□ 0.56
SUPT16H-205ENST00000556217 SMIM22K7EJ46 135 aa18.51■□□□□ 0.55
SUPT16H-205ENST00000556217 KIAA0355O15063 1070 aa18.51■□□□□ 0.55
SUPT16H-205ENST00000556217 PQBP1O60828 265 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms