RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 NPLOC4Q8TAT6 608 aa13.13□□□□□ -0.31
CHGA-205ENST00000556098 USP6NLQ92738 828 aa13.13□□□□□ -0.31
CHGA-205ENST00000556098 BADQ92934 168 aa13.13□□□□□ -0.31
CHGA-205ENST00000556098 FERMT2Q96AC1 680 aa13.13□□□□□ -0.31
CHGA-205ENST00000556098 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.13□□□□□ -0.31
CHGA-205ENST00000556098 LSG1Q9H089 658 aaKnown RBP13.13□□□□□ -0.31
CHGA-205ENST00000556098 K7ELQ4 463 aaPredicted RBP13.12□□□□□ -0.31
CHGA-205ENST00000556098 CNMDO75829 334 aa13.12□□□□□ -0.31
CHGA-205ENST00000556098 PTPREP23469 700 aa13.12□□□□□ -0.31
CHGA-205ENST00000556098 TRIM60Q495X7 471 aa13.12□□□□□ -0.31
CHGA-205ENST00000556098 FAM109BQ6ICB4 259 aaPredicted RBP13.12□□□□□ -0.31
CHGA-205ENST00000556098 FOXP4Q8IVH2 680 aaPredicted RBP13.12□□□□□ -0.31
CHGA-205ENST00000556098 MIGA1Q8NAN2 632 aa13.12□□□□□ -0.31
CHGA-205ENST00000556098 LPAR1Q92633 364 aa13.12□□□□□ -0.31
CHGA-205ENST00000556098 KCNB2Q92953 911 aa13.12□□□□□ -0.31
CHGA-205ENST00000556098 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
CHGA-205ENST00000556098 RABGAP1Q9Y3P9 1069 aa13.12□□□□□ -0.31
CHGA-205ENST00000556098 EYSQ5T1H1 3165 aa13.12□□□□□ -0.31
CHGA-205ENST00000556098 MCM3APO60318 1980 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 SLC15A5A6NIM6 579 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 DNM1LO00429 736 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 MSCO60682 206 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 CYP7A1P22680 504 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 PLS1Q14651 629 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 MCMDC2Q4G0Z9 681 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 POTEEQ6S8J3 1075 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 TRPV1Q8NER1 839 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 DNAJC2Q99543 621 aaKnown RBP13.11□□□□□ -0.31
CHGA-205ENST00000556098 TM6SF1Q9BZW5 370 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 TANGO6Q9C0B7 1094 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 SEMA6BQ9H3T3 888 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 RPAP3Q9H6T3 665 aaPredicted RBP13.11□□□□□ -0.31
CHGA-205ENST00000556098 BTBD7Q9P203 1132 aa13.11□□□□□ -0.31
CHGA-205ENST00000556098 TCF20Q9UGU0 1960 aaKnown RBP13.11□□□□□ -0.31
CHGA-205ENST00000556098 LAMA2P24043 3122 aaKnown RBP13.11□□□□□ -0.31
CHGA-205ENST00000556098 MPHOSPH10O00566 681 aaKnown RBP13.1□□□□□ -0.31
CHGA-205ENST00000556098 IDH1O75874 414 aaKnown RBP13.1□□□□□ -0.31
CHGA-205ENST00000556098 ZAP70P43403 619 aa13.1□□□□□ -0.31
CHGA-205ENST00000556098 NMIQ13287 307 aaPredicted RBP13.1□□□□□ -0.31
CHGA-205ENST00000556098 KRT32Q14532 448 aa13.1□□□□□ -0.31
CHGA-205ENST00000556098 ABCB5Q2M3G0 1257 aa13.1□□□□□ -0.31
CHGA-205ENST00000556098 SLC39A5Q6ZMH5 540 aa13.1□□□□□ -0.31
CHGA-205ENST00000556098 ACER1Q8TDN7 264 aa13.1□□□□□ -0.31
CHGA-205ENST00000556098 PPM1EQ8WY54 764 aa13.1□□□□□ -0.31
CHGA-205ENST00000556098 MAP4K1Q92918 833 aa13.1□□□□□ -0.31
CHGA-205ENST00000556098 RNF113AO15541 343 aaKnown RBP13.09□□□□□ -0.31
CHGA-205ENST00000556098 VCAM1P19320 739 aa13.09□□□□□ -0.31
CHGA-205ENST00000556098 PSMA5P28066 241 aa13.09□□□□□ -0.31
CHGA-205ENST00000556098 ADCYAP1R1P41586 468 aa13.09□□□□□ -0.31
CHGA-205ENST00000556098 USP14P54578 494 aa13.09□□□□□ -0.31
CHGA-205ENST00000556098 TSGA10IPQ3SY00 556 aa13.09□□□□□ -0.31
CHGA-205ENST00000556098 CERKLQ49MI3 558 aaPredicted RBP13.09□□□□□ -0.31
CHGA-205ENST00000556098 ZMYM1Q5SVZ6 1142 aa13.09□□□□□ -0.31
CHGA-205ENST00000556098 PRAMEF19Q5SWL8 479 aa13.09□□□□□ -0.31
CHGA-205ENST00000556098 CATSPERGQ6ZRH7 1159 aa13.09□□□□□ -0.31
CHGA-205ENST00000556098 SH3RF1Q7Z6J0 888 aa13.09□□□□□ -0.31
CHGA-205ENST00000556098 ARRDC4Q8NCT1 418 aa13.09□□□□□ -0.31
CHGA-205ENST00000556098 RNPC3Q96LT9 517 aaKnown RBP13.09□□□□□ -0.31
CHGA-205ENST00000556098 DSCC1Q9BVC3 393 aa13.09□□□□□ -0.31
CHGA-205ENST00000556098 CABP5Q9NP86 173 aa13.09□□□□□ -0.31
CHGA-205ENST00000556098 PIH1D3Q9NQM4 214 aaKnown RBP13.09□□□□□ -0.31
CHGA-205ENST00000556098 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
CHGA-205ENST00000556098 MYH4Q9Y623 1939 aa13.08□□□□□ -0.32
CHGA-205ENST00000556098 GOLIM4O00461 696 aa13.08□□□□□ -0.32
CHGA-205ENST00000556098 CYP2E1P05181 493 aaPredicted RBP13.08□□□□□ -0.32
CHGA-205ENST00000556098 ADORA2AP29274 412 aa13.08□□□□□ -0.32
CHGA-205ENST00000556098 GRB14Q14449 540 aa13.08□□□□□ -0.32
CHGA-205ENST00000556098 NCAPG2Q86XI2 1143 aa13.08□□□□□ -0.32
CHGA-205ENST00000556098 TTYH1Q9H313 450 aaPredicted RBP13.08□□□□□ -0.32
CHGA-205ENST00000556098 PRDM6Q9NQX0 595 aa13.08□□□□□ -0.32
CHGA-205ENST00000556098 GINM1Q9NU53 330 aa13.08□□□□□ -0.32
CHGA-205ENST00000556098 A0A0D9SFI3 127 aa13.07□□□□□ -0.32
CHGA-205ENST00000556098 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
CHGA-205ENST00000556098 POLR3DP05423 398 aaPredicted RBP13.07□□□□□ -0.32
CHGA-205ENST00000556098 HSP90AA1P07900 732 aaKnown RBP13.07□□□□□ -0.32
CHGA-205ENST00000556098 CYBAP13498 195 aa13.07□□□□□ -0.32
CHGA-205ENST00000556098 NECTIN1Q15223 517 aa13.07□□□□□ -0.32
CHGA-205ENST00000556098 MAGEB6Q8N7X4 407 aa13.07□□□□□ -0.32
CHGA-205ENST00000556098 APPBP2Q92624 585 aa13.07□□□□□ -0.32
CHGA-205ENST00000556098 PDLIM7Q9NR12 457 aa13.07□□□□□ -0.32
CHGA-205ENST00000556098 SERPINB13Q9UIV8 391 aa13.07□□□□□ -0.32
CHGA-205ENST00000556098 MYO9BQ13459 2157 aa13.06□□□□□ -0.32
CHGA-205ENST00000556098 TRIM43BA6NCK2 446 aa13.06□□□□□ -0.32
CHGA-205ENST00000556098 PQBP1O60828 265 aaKnown RBP13.06□□□□□ -0.32
CHGA-205ENST00000556098 PPP4CP60510 307 aa13.06□□□□□ -0.32
CHGA-205ENST00000556098 SEPT2Q15019 361 aa13.06□□□□□ -0.32
CHGA-205ENST00000556098 UBE3CQ15386 1083 aa13.06□□□□□ -0.32
CHGA-205ENST00000556098 FAM47AQ5JRC9 791 aa13.06□□□□□ -0.32
CHGA-205ENST00000556098 SYMPKQ92797 1274 aaKnown RBP13.06□□□□□ -0.32
CHGA-205ENST00000556098 TRIM43Q96BQ3 446 aaPredicted RBP13.06□□□□□ -0.32
CHGA-205ENST00000556098 C12orf42Q96LP6 360 aa13.06□□□□□ -0.32
CHGA-205ENST00000556098 FAM227BQ96M60 508 aa13.06□□□□□ -0.32
CHGA-205ENST00000556098 MOV10L1Q9BXT6 1211 aaKnown RBP13.06□□□□□ -0.32
CHGA-205ENST00000556098 CHMP5Q9NZZ3 219 aa13.06□□□□□ -0.32
CHGA-205ENST00000556098 CTNNA3Q9UI47 895 aa13.06□□□□□ -0.32
CHGA-205ENST00000556098 RBM8AQ9Y5S9 174 aaKnown RBP13.06□□□□□ -0.32
CHGA-205ENST00000556098 RAD21O60216 631 aa13.05□□□□□ -0.32
CHGA-205ENST00000556098 HMGB1P09429 215 aaKnown RBP13.05□□□□□ -0.32
CHGA-205ENST00000556098 RAG1P15918 1043 aa13.05□□□□□ -0.32
CHGA-205ENST00000556098 ERCC3P19447 782 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms