RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 ADAMTS5Q9UNA0 930 aa11.14□□□□□ -0.63
VIPAS39-207ENST00000555854 MYH4Q9Y623 1939 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 SLC15A5A6NIM6 579 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 MINDY4BA8MYZ0 360 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 COBLO75128 1261 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 TFRCP02786 760 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 ERCC3P19447 782 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 TDO2P48775 406 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 PDE1AP54750 535 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 CCNA1P78396 465 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 ATP2B2Q01814 1243 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 TMEM132BQ14DG7 1078 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 FAM83BQ5T0W9 1011 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 ANKRD45Q5TZF3 282 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 VPS53Q5VIR6 699 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 WDR78Q5VTH9 848 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 SMC5Q8IY18 1101 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 AMOTL1Q8IY63 956 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 SHCBP1Q8NEM2 672 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 GCC1Q96CN9 775 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 DDRGK1Q96HY6 314 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 NUP88Q99567 741 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 SH2D4AQ9H788 454 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 ZNF214Q9UL59 606 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 PPP1R9AQ9ULJ8 1098 aa11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.13□□□□□ -0.63
VIPAS39-207ENST00000555854 A0A0D9SFI3 127 aa11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 NDUFB10O96000 172 aa11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 IGHDP01880 384 aa11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 GNAT2P19087 354 aa11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 ADORA2AP29274 412 aa11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 FXR1P51114 621 aaKnown RBP eCLIP11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 RASGRP2Q7LDG7 609 aa11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 ANKLE1Q8NAG6 615 aa11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 SPDYE1Q8NFV5 336 aaPredicted RBP11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 CEP95Q96GE4 821 aa11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 HTATIP2Q9BUP3 242 aa11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 LNPKQ9C0E8 428 aa11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 NYAP2Q9P242 653 aa11.12□□□□□ -0.63
VIPAS39-207ENST00000555854 COL6A1P12109 1028 aa11.11□□□□□ -0.63
VIPAS39-207ENST00000555854 CYBAP13498 195 aa11.11□□□□□ -0.63
VIPAS39-207ENST00000555854 CYP2C19P33261 490 aa11.11□□□□□ -0.63
VIPAS39-207ENST00000555854 PPARAQ07869 468 aa11.11□□□□□ -0.63
VIPAS39-207ENST00000555854 ZNF589Q86UQ0 364 aaPredicted RBP11.11□□□□□ -0.63
VIPAS39-207ENST00000555854 CCAR1Q8IX12 1150 aaKnown RBP11.11□□□□□ -0.63
VIPAS39-207ENST00000555854 TRMT44Q8IYL2 757 aaKnown RBP11.11□□□□□ -0.63
VIPAS39-207ENST00000555854 LRRC47Q8N1G4 583 aaKnown RBP11.11□□□□□ -0.63
VIPAS39-207ENST00000555854 MB21D1Q8N884 522 aa11.11□□□□□ -0.63
VIPAS39-207ENST00000555854 DPF3Q92784 378 aa11.11□□□□□ -0.63
VIPAS39-207ENST00000555854 FAM227BQ96M60 508 aa11.11□□□□□ -0.63
VIPAS39-207ENST00000555854 HOXC10Q9NYD6 342 aa11.11□□□□□ -0.63
VIPAS39-207ENST00000555854 F5H6K3 240 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 VWA5AO00534 786 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 APPP05067 770 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 KLRC3Q07444 240 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 FAM47AQ5JRC9 791 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 OLFML2BQ68BL8 750 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 NECAB2Q7Z6G3 386 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 NEDD1Q8NHV4 660 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 EVI5LQ96CN4 794 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 NAPBQ9H115 298 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 MKNK2Q9HBH9 465 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 CWC22Q9HCG8 908 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 GOPCQ9HD26 462 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 INCENPQ9NQS7 918 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 MTMR4Q9NYA4 1195 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 RBM27Q9P2N5 1060 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 IVNS1ABPQ9Y6Y0 642 aa11.1□□□□□ -0.63
VIPAS39-207ENST00000555854 PLXNA1Q9UIW2 1896 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 CAPN2P17655 700 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 CTDSPL2Q05D32 466 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 PLS1Q14651 629 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 NCAPG2Q86XI2 1143 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 RIOX2Q8IUF8 465 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 ABRAQ8N0Z2 381 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 MKL1Q969V6 931 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 MAML3Q96JK9 1138 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 NBPF3Q9H094 633 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 MROH8Q9H579 483 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 C11orf49Q9H6J7 331 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 CLIP2Q9UDT6 1046 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 DDX20Q9UHI6 824 aaKnown RBP11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 RIPK3Q9Y572 518 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 COL6A3P12111 3177 aa11.09□□□□□ -0.63
VIPAS39-207ENST00000555854 ZNFX1Q9P2E3 1918 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 LAMA4Q16363 1823 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 RAD21O60216 631 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 NMT2O60551 498 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 PGK2P07205 417 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 NOVP48745 357 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 NUCB1Q02818 461 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 NMIQ13287 307 aaPredicted RBP11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 LRRFIP1Q32MZ4 808 aaKnown RBP11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 MFSD14CQ5VZR4 134 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 PLEKHM2Q8IWE5 1019 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 C7orf61Q8IZ16 206 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 GMCL1P1Q8NEA9 526 aa11.08□□□□□ -0.64
VIPAS39-207ENST00000555854 FGD4Q96M96 766 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms