RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 SLC15A5A6NIM6 579 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 USP17L10C9JJH3 530 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 OATP04181 439 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 ARID4AP29374 1257 aaPredicted RBP11.25□□□□□ -0.61
PRKCH-218ENST00000555628 TRIM60Q495X7 471 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 SLC39A5Q6ZMH5 540 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 TBC1D9Q6ZT07 1266 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 ERICH6Q7L0X2 663 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 EDC3Q96F86 508 aaKnown RBP11.25□□□□□ -0.61
PRKCH-218ENST00000555628 XAGE2Q96GT9 111 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 TMEM134Q9H6X4 195 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 TMOD4Q9NZQ9 345 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 RABGAP1Q9Y3P9 1069 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 FLT1P17948 1338 aa11.25□□□□□ -0.61
PRKCH-218ENST00000555628 TNFRSF10AO00220 468 aa11.24□□□□□ -0.61
PRKCH-218ENST00000555628 CYP2C19P33261 490 aa11.24□□□□□ -0.61
PRKCH-218ENST00000555628 GRIN2CQ14957 1233 aa11.24□□□□□ -0.61
PRKCH-218ENST00000555628 MFSD14CQ5VZR4 134 aa11.24□□□□□ -0.61
PRKCH-218ENST00000555628 ADGRA1Q86SQ6 560 aa11.24□□□□□ -0.61
PRKCH-218ENST00000555628 TEX11Q8IYF3 940 aa11.24□□□□□ -0.61
PRKCH-218ENST00000555628 PAGR1Q9BTK6 254 aa11.24□□□□□ -0.61
PRKCH-218ENST00000555628 DHX36Q9H2U1 1008 aaKnown RBP11.24□□□□□ -0.61
PRKCH-218ENST00000555628 BTBD7Q9P203 1132 aa11.24□□□□□ -0.61
PRKCH-218ENST00000555628 ATP11BQ9Y2G3 1177 aa11.24□□□□□ -0.61
PRKCH-218ENST00000555628 PARP14Q460N5 1801 aa11.23□□□□□ -0.61
PRKCH-218ENST00000555628 GDF11O95390 407 aa11.23□□□□□ -0.61
PRKCH-218ENST00000555628 PLA2G5P39877 138 aa11.23□□□□□ -0.61
PRKCH-218ENST00000555628 MCAMP43121 646 aa11.23□□□□□ -0.61
PRKCH-218ENST00000555628 MVPQ14764 893 aaKnown RBP11.23□□□□□ -0.61
PRKCH-218ENST00000555628 GJC2Q5T442 439 aaPredicted RBP11.23□□□□□ -0.61
PRKCH-218ENST00000555628 OLFML2BQ68BL8 750 aa11.23□□□□□ -0.61
PRKCH-218ENST00000555628 SPATA5Q8NB90 893 aa11.23□□□□□ -0.61
PRKCH-218ENST00000555628 NDUFB9Q9Y6M9 179 aa11.23□□□□□ -0.61
PRKCH-218ENST00000555628 ROBO3Q96MS0 1386 aa11.23□□□□□ -0.61
PRKCH-218ENST00000555628 UBTFL1P0CB47 393 aaPredicted RBP11.22□□□□□ -0.61
PRKCH-218ENST00000555628 MYH1P12882 1939 aa11.22□□□□□ -0.61
PRKCH-218ENST00000555628 VCAM1P19320 739 aa11.22□□□□□ -0.61
PRKCH-218ENST00000555628 GSTO1P78417 241 aa11.22□□□□□ -0.61
PRKCH-218ENST00000555628 TFCP2Q12800 502 aa11.22□□□□□ -0.61
PRKCH-218ENST00000555628 MTX1Q13505 466 aa11.22□□□□□ -0.61
PRKCH-218ENST00000555628 TATDN1Q6P1N9 297 aa11.22□□□□□ -0.61
PRKCH-218ENST00000555628 USP17L2Q6R6M4 530 aa11.22□□□□□ -0.61
PRKCH-218ENST00000555628 CATSPERGQ6ZRH7 1159 aa11.22□□□□□ -0.61
PRKCH-218ENST00000555628 PRKAG2Q9UGJ0 569 aa11.22□□□□□ -0.61
PRKCH-218ENST00000555628 KIAA0355O15063 1070 aa11.21□□□□□ -0.61
PRKCH-218ENST00000555628 SEPT4O43236 478 aa11.21□□□□□ -0.61
PRKCH-218ENST00000555628 LDHCP07864 332 aa11.21□□□□□ -0.61
PRKCH-218ENST00000555628 LRRC41Q15345 812 aa11.21□□□□□ -0.61
PRKCH-218ENST00000555628 NYAP1Q6ZVC0 841 aa11.21□□□□□ -0.61
PRKCH-218ENST00000555628 FOXP4Q8IVH2 680 aaPredicted RBP11.21□□□□□ -0.61
PRKCH-218ENST00000555628 KIAA1683Q9H0B3 1180 aa11.21□□□□□ -0.61
PRKCH-218ENST00000555628 MRS2Q9HD23 443 aa11.21□□□□□ -0.61
PRKCH-218ENST00000555628 PALD1Q9ULE6 856 aa11.21□□□□□ -0.61
PRKCH-218ENST00000555628 SMCHD1A6NHR9 2005 aa11.21□□□□□ -0.62
PRKCH-218ENST00000555628 USP17L15C9J2P7 530 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 USP17L13C9JLJ4 530 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 USP17L11C9JVI0 530 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 USP17L18D6R9N7 530 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 USP17L22D6RA61 530 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 USP17L17D6RBQ6 530 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 USP17L19D6RCP7 530 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 USP17L20D6RJB6 530 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 GH2P01242 217 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 CCNA1P78396 465 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 ATP2B2Q01814 1243 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 TLE2Q04725 743 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 USP17L24Q0WX57 530 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 FAM47AQ5JRC9 791 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 RASIP1Q5U651 963 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 MAPKAPK5Q8IW41 473 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 ARRDC4Q8NCT1 418 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 ACER1Q8TDN7 264 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 TGFBRAP1Q8WUH2 860 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 RNPC3Q96LT9 517 aaKnown RBP11.2□□□□□ -0.62
PRKCH-218ENST00000555628 MEIS3Q99687 375 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 PRDM5Q9NQX1 630 aaPredicted RBP11.2□□□□□ -0.62
PRKCH-218ENST00000555628 AATFQ9NY61 560 aaKnown RBP eCLIP11.2□□□□□ -0.62
PRKCH-218ENST00000555628 PHF24Q9UPV7 400 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 MYO9BQ13459 2157 aa11.2□□□□□ -0.62
PRKCH-218ENST00000555628 KBTBD13C9JR72 458 aa11.19□□□□□ -0.62
PRKCH-218ENST00000555628 COBLO75128 1261 aa11.19□□□□□ -0.62
PRKCH-218ENST00000555628 GLRX3O76003 335 aaKnown RBP11.19□□□□□ -0.62
PRKCH-218ENST00000555628 ADORA2AP29274 412 aa11.19□□□□□ -0.62
PRKCH-218ENST00000555628 CNGA1P29973 690 aa11.19□□□□□ -0.62
PRKCH-218ENST00000555628 GUCY1A2P33402 732 aa11.19□□□□□ -0.62
PRKCH-218ENST00000555628 ADCYAP1R1P41586 468 aa11.19□□□□□ -0.62
PRKCH-218ENST00000555628 ALDH1L2Q3SY69 923 aa11.19□□□□□ -0.62
PRKCH-218ENST00000555628 ANO1Q5XXA6 986 aa11.19□□□□□ -0.62
PRKCH-218ENST00000555628 RAI14Q9P0K7 980 aa11.19□□□□□ -0.62
PRKCH-218ENST00000555628 AKAP2Q9Y2D5 859 aa11.19□□□□□ -0.62
PRKCH-218ENST00000555628 PLXNA1Q9UIW2 1896 aa11.19□□□□□ -0.62
PRKCH-218ENST00000555628 AKNAD1Q5T1N1 836 aa11.18□□□□□ -0.62
PRKCH-218ENST00000555628 CCAR1Q8IX12 1150 aaKnown RBP11.18□□□□□ -0.62
PRKCH-218ENST00000555628 ATXN2LQ8WWM7 1075 aaKnown RBP11.18□□□□□ -0.62
PRKCH-218ENST00000555628 ASB2Q96Q27 587 aa11.18□□□□□ -0.62
PRKCH-218ENST00000555628 MOV10L1Q9BXT6 1211 aaKnown RBP11.18□□□□□ -0.62
PRKCH-218ENST00000555628 EHD4Q9H223 541 aa11.18□□□□□ -0.62
PRKCH-218ENST00000555628 ZNF576Q9H609 170 aa11.18□□□□□ -0.62
PRKCH-218ENST00000555628 ZNFX1Q9P2E3 1918 aaKnown RBP11.17□□□□□ -0.62
PRKCH-218ENST00000555628 SYNGAP1Q96PV0 1343 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms