RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 ITGB8P26012 769 aa15.84■□□□□ 0.13
XRCC3-212ENST00000555231 ABRAQ8N0Z2 381 aa15.84■□□□□ 0.13
XRCC3-212ENST00000555231 MMP19Q99542 508 aa15.84■□□□□ 0.13
XRCC3-212ENST00000555231 TTYH1Q9H313 450 aaPredicted RBP15.84■□□□□ 0.13
XRCC3-212ENST00000555231 XPNPEP3Q9NQH7 507 aa15.84■□□□□ 0.13
XRCC3-212ENST00000555231 FBXO28Q9NVF7 368 aa15.84■□□□□ 0.13
XRCC3-212ENST00000555231 MYH7P12883 1935 aa15.84■□□□□ 0.13
XRCC3-212ENST00000555231 LAMA2P24043 3122 aaKnown RBP15.83■□□□□ 0.12
XRCC3-212ENST00000555231 WDR46O15213 610 aaKnown RBP15.83■□□□□ 0.12
XRCC3-212ENST00000555231 PGK1P00558 417 aa15.83■□□□□ 0.12
XRCC3-212ENST00000555231 CHGBP05060 677 aa15.83■□□□□ 0.12
XRCC3-212ENST00000555231 TAL1P17542 331 aaPredicted RBP15.83■□□□□ 0.12
XRCC3-212ENST00000555231 CDK8P49336 464 aa15.83■□□□□ 0.12
XRCC3-212ENST00000555231 HSP90AB4PQ58FF6 505 aa15.83■□□□□ 0.12
XRCC3-212ENST00000555231 CLASRPQ8N2M8 674 aaKnown RBP15.83■□□□□ 0.12
XRCC3-212ENST00000555231 MAFAQ8NHW3 353 aaPredicted RBP15.83■□□□□ 0.12
XRCC3-212ENST00000555231 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.83■□□□□ 0.12
XRCC3-212ENST00000555231 SH2D4AQ9H788 454 aa15.83■□□□□ 0.12
XRCC3-212ENST00000555231 RAD21O60216 631 aa15.82■□□□□ 0.12
XRCC3-212ENST00000555231 SLC25A27O95847 323 aa15.82■□□□□ 0.12
XRCC3-212ENST00000555231 IFIT2P09913 472 aaKnown RBP15.82■□□□□ 0.12
XRCC3-212ENST00000555231 RARBP10826 455 aa15.82■□□□□ 0.12
XRCC3-212ENST00000555231 EEF2P13639 858 aaKnown RBP15.82■□□□□ 0.12
XRCC3-212ENST00000555231 ADD2P35612 726 aa15.82■□□□□ 0.12
XRCC3-212ENST00000555231 EPHB4P54760 987 aa15.82■□□□□ 0.12
XRCC3-212ENST00000555231 HNRNPUQ00839 825 aaKnown RBP eCLIP15.82■□□□□ 0.12
XRCC3-212ENST00000555231 LENG1Q96BZ8 264 aaPredicted RBP15.82■□□□□ 0.12
XRCC3-212ENST00000555231 KIF1BPQ96EK5 621 aa15.82■□□□□ 0.12
XRCC3-212ENST00000555231 BOLA2Q9H3K6 86 aa15.82■□□□□ 0.12
XRCC3-212ENST00000555231 PAG1Q9NWQ8 432 aa15.82■□□□□ 0.12
XRCC3-212ENST00000555231 PHF24Q9UPV7 400 aa15.82■□□□□ 0.12
XRCC3-212ENST00000555231 USP17L12C9JPN9 530 aa15.81■□□□□ 0.12
XRCC3-212ENST00000555231 USP17L21D6R901 530 aa15.81■□□□□ 0.12
XRCC3-212ENST00000555231 SMAD3P84022 425 aaKnown RBP15.81■□□□□ 0.12
XRCC3-212ENST00000555231 ZNF792Q3KQV3 632 aa15.81■□□□□ 0.12
XRCC3-212ENST00000555231 C12orf60Q5U649 245 aa15.81■□□□□ 0.12
XRCC3-212ENST00000555231 C1orf53Q5VUE5 145 aa15.81■□□□□ 0.12
XRCC3-212ENST00000555231 RIOX2Q8IUF8 465 aa15.81■□□□□ 0.12
XRCC3-212ENST00000555231 CCDC17Q96LX7 622 aa15.81■□□□□ 0.12
XRCC3-212ENST00000555231 TINF2Q9BSI4 451 aa15.81■□□□□ 0.12
XRCC3-212ENST00000555231 ATP8A2Q9NTI2 1148 aa15.81■□□□□ 0.12
XRCC3-212ENST00000555231 TACC3Q9Y6A5 838 aa15.81■□□□□ 0.12
XRCC3-212ENST00000555231 PQBP1O60828 265 aaKnown RBP15.8■□□□□ 0.12
XRCC3-212ENST00000555231 CLTBP09497 229 aa15.8■□□□□ 0.12
XRCC3-212ENST00000555231 STAT3P40763 770 aa15.8■□□□□ 0.12
XRCC3-212ENST00000555231 KCTD2Q14681 263 aa15.8■□□□□ 0.12
XRCC3-212ENST00000555231 FAM83BQ5T0W9 1011 aa15.8■□□□□ 0.12
XRCC3-212ENST00000555231 RNF180Q86T96 592 aa15.8■□□□□ 0.12
XRCC3-212ENST00000555231 RNPC3Q96LT9 517 aaKnown RBP15.8■□□□□ 0.12
XRCC3-212ENST00000555231 ADAMTS5Q9UNA0 930 aa15.8■□□□□ 0.12
XRCC3-212ENST00000555231 A0A1W2PQ45 241 aaPredicted RBP15.79■□□□□ 0.12
XRCC3-212ENST00000555231 A0A1W2PQY0 241 aa15.79■□□□□ 0.12
XRCC3-212ENST00000555231 VWA5AO00534 786 aa15.79■□□□□ 0.12
XRCC3-212ENST00000555231 ZNF865P0CJ78 1059 aaPredicted RBP15.79■□□□□ 0.12
XRCC3-212ENST00000555231 FOSL2P15408 326 aa15.79■□□□□ 0.12
XRCC3-212ENST00000555231 RAG1P15918 1043 aa15.79■□□□□ 0.12
XRCC3-212ENST00000555231 C16orf86Q6ZW13 317 aa15.79■□□□□ 0.12
XRCC3-212ENST00000555231 AMOTL1Q8IY63 956 aa15.79■□□□□ 0.12
XRCC3-212ENST00000555231 NRBP1Q9UHY1 535 aa15.79■□□□□ 0.12
XRCC3-212ENST00000555231 ZNF214Q9UL59 606 aaPredicted RBP15.79■□□□□ 0.12
XRCC3-212ENST00000555231 PPP1R9AQ9ULJ8 1098 aa15.79■□□□□ 0.12
XRCC3-212ENST00000555231 ADAMTS4O75173 837 aa15.78■□□□□ 0.12
XRCC3-212ENST00000555231 AKR1A1P14550 325 aa15.78■□□□□ 0.12
XRCC3-212ENST00000555231 SIRT2Q8IXJ6 389 aa15.78■□□□□ 0.12
XRCC3-212ENST00000555231 STK11IPQ8N1F8 1099 aa15.78■□□□□ 0.12
XRCC3-212ENST00000555231 REPS2Q8NFH8 660 aa15.78■□□□□ 0.12
XRCC3-212ENST00000555231 NUP88Q99567 741 aaPredicted RBP15.78■□□□□ 0.12
XRCC3-212ENST00000555231 KANSL2Q9H9L4 492 aa15.78■□□□□ 0.12
XRCC3-212ENST00000555231 GOPCQ9HD26 462 aa15.78■□□□□ 0.12
XRCC3-212ENST00000555231 TMEM39AQ9NV64 488 aa15.78■□□□□ 0.12
XRCC3-212ENST00000555231 DIS3Q9Y2L1 958 aaKnown RBP15.78■□□□□ 0.12
XRCC3-212ENST00000555231 SLC4A4Q9Y6R1 1079 aa15.78■□□□□ 0.12
XRCC3-212ENST00000555231 EYSQ5T1H1 3165 aa15.78■□□□□ 0.12
XRCC3-212ENST00000555231 GREB1LQ9C091 1923 aaPredicted RBP15.78■□□□□ 0.12
XRCC3-212ENST00000555231 MCM3APO60318 1980 aa15.77■□□□□ 0.12
XRCC3-212ENST00000555231 KIAA0355O15063 1070 aa15.77■□□□□ 0.12
XRCC3-212ENST00000555231 SLC4A3P48751 1232 aa15.77■□□□□ 0.12
XRCC3-212ENST00000555231 CTR9Q6PD62 1173 aa15.77■□□□□ 0.12
XRCC3-212ENST00000555231 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.77■□□□□ 0.12
XRCC3-212ENST00000555231 SYNRGQ9UMZ2 1314 aa15.76■□□□□ 0.11
XRCC3-212ENST00000555231 HMMRO75330 724 aa15.76■□□□□ 0.11
XRCC3-212ENST00000555231 ATP5JP18859 108 aa15.76■□□□□ 0.11
XRCC3-212ENST00000555231 IRX5P78411 483 aaPredicted RBP15.76■□□□□ 0.11
XRCC3-212ENST00000555231 FPGSQ05932 587 aa15.76■□□□□ 0.11
XRCC3-212ENST00000555231 FAAP100Q0VG06 881 aa15.76■□□□□ 0.11
XRCC3-212ENST00000555231 RPAP2Q8IXW5 612 aaPredicted RBP15.76■□□□□ 0.11
XRCC3-212ENST00000555231 DDRGK1Q96HY6 314 aa15.76■□□□□ 0.11
XRCC3-212ENST00000555231 HAUS7Q99871 368 aa15.76■□□□□ 0.11
XRCC3-212ENST00000555231 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.76■□□□□ 0.11
XRCC3-212ENST00000555231 PUS7LQ9H0K6 701 aaKnown RBP15.76■□□□□ 0.11
XRCC3-212ENST00000555231 STARD7Q9NQZ5 370 aa15.76■□□□□ 0.11
XRCC3-212ENST00000555231 CNPY2Q9Y2B0 182 aa15.76■□□□□ 0.11
XRCC3-212ENST00000555231 RIPK3Q9Y572 518 aa15.76■□□□□ 0.11
XRCC3-212ENST00000555231 CDH23Q9H251 3354 aa15.76■□□□□ 0.11
XRCC3-212ENST00000555231 MYH4Q9Y623 1939 aa15.76■□□□□ 0.11
XRCC3-212ENST00000555231 ROBO3Q96MS0 1386 aa15.75■□□□□ 0.11
XRCC3-212ENST00000555231 ZBED9Q6R2W3 1325 aa15.75■□□□□ 0.11
XRCC3-212ENST00000555231 MYADML2A6NDP7 307 aa15.75■□□□□ 0.11
XRCC3-212ENST00000555231 RAB11FIP3O75154 756 aa15.75■□□□□ 0.11
XRCC3-212ENST00000555231 SNAI1O95863 264 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms