RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 ATP5JP18859 108 aa18.13■□□□□ 0.49
XRCC3-210ENST00000554974 CDK8P49336 464 aa18.13■□□□□ 0.49
XRCC3-210ENST00000554974 TMEM132BQ14DG7 1078 aa18.13■□□□□ 0.49
XRCC3-210ENST00000554974 TRIM60Q495X7 471 aa18.13■□□□□ 0.49
XRCC3-210ENST00000554974 C12orf60Q5U649 245 aa18.13■□□□□ 0.49
XRCC3-210ENST00000554974 ARRDC4Q8NCT1 418 aa18.13■□□□□ 0.49
XRCC3-210ENST00000554974 FERMT2Q96AC1 680 aa18.13■□□□□ 0.49
XRCC3-210ENST00000554974 MAML3Q96JK9 1138 aa18.13■□□□□ 0.49
XRCC3-210ENST00000554974 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.13■□□□□ 0.49
XRCC3-210ENST00000554974 GREB1LQ9C091 1923 aaPredicted RBP18.13■□□□□ 0.49
XRCC3-210ENST00000554974 EEF2P13639 858 aaKnown RBP18.12■□□□□ 0.49
XRCC3-210ENST00000554974 ADCYAP1R1P41586 468 aa18.12■□□□□ 0.49
XRCC3-210ENST00000554974 SLC39A5Q6ZMH5 540 aa18.12■□□□□ 0.49
XRCC3-210ENST00000554974 C16orf86Q6ZW13 317 aa18.12■□□□□ 0.49
XRCC3-210ENST00000554974 ABRAQ8N0Z2 381 aa18.12■□□□□ 0.49
XRCC3-210ENST00000554974 GUCD1Q96NT3 240 aa18.12■□□□□ 0.49
XRCC3-210ENST00000554974 HAUS7Q99871 368 aa18.12■□□□□ 0.49
XRCC3-210ENST00000554974 SLC5A4Q9NY91 659 aa18.12■□□□□ 0.49
XRCC3-210ENST00000554974 DDX19BQ9UMR2 479 aa18.12■□□□□ 0.49
XRCC3-210ENST00000554974 POTEB2H3BUK9 544 aa18.11■□□□□ 0.49
XRCC3-210ENST00000554974 RAB11FIP3O75154 756 aa18.11■□□□□ 0.49
XRCC3-210ENST00000554974 PGK2P07205 417 aa18.11■□□□□ 0.49
XRCC3-210ENST00000554974 FCER1AP12319 257 aa18.11■□□□□ 0.49
XRCC3-210ENST00000554974 LRRC41Q15345 812 aa18.11■□□□□ 0.49
XRCC3-210ENST00000554974 AMOTL1Q8IY63 956 aa18.11■□□□□ 0.49
XRCC3-210ENST00000554974 CCDC17Q96LX7 622 aa18.11■□□□□ 0.49
XRCC3-210ENST00000554974 SLC4A4Q9Y6R1 1079 aa18.11■□□□□ 0.49
XRCC3-210ENST00000554974 SMCHD1A6NHR9 2005 aa18.11■□□□□ 0.49
XRCC3-210ENST00000554974 CDH23Q9H251 3354 aa18.1■□□□□ 0.49
XRCC3-210ENST00000554974 RAD21O60216 631 aa18.1■□□□□ 0.49
XRCC3-210ENST00000554974 SNX17Q15036 470 aa18.1■□□□□ 0.49
XRCC3-210ENST00000554974 C9orf50Q5SZB4 431 aa18.1■□□□□ 0.49
XRCC3-210ENST00000554974 SH3RF1Q7Z6J0 888 aa18.1■□□□□ 0.49
XRCC3-210ENST00000554974 LENG1Q96BZ8 264 aaPredicted RBP18.1■□□□□ 0.49
XRCC3-210ENST00000554974 MMP19Q99542 508 aa18.1■□□□□ 0.49
XRCC3-210ENST00000554974 PDLIM7Q9NR12 457 aa18.1■□□□□ 0.49
XRCC3-210ENST00000554974 PRUNE2Q8WUY3 3088 aa18.09■□□□□ 0.49
XRCC3-210ENST00000554974 RRP1P56182 461 aaKnown RBP18.09■□□□□ 0.49
XRCC3-210ENST00000554974 SHHQ15465 462 aa18.09■□□□□ 0.49
XRCC3-210ENST00000554974 FAM83BQ5T0W9 1011 aa18.09■□□□□ 0.49
XRCC3-210ENST00000554974 CTR9Q6PD62 1173 aa18.09■□□□□ 0.49
XRCC3-210ENST00000554974 BADQ92934 168 aa18.09■□□□□ 0.49
XRCC3-210ENST00000554974 DDRGK1Q96HY6 314 aa18.09■□□□□ 0.49
XRCC3-210ENST00000554974 PUS7LQ9H0K6 701 aaKnown RBP18.09■□□□□ 0.49
XRCC3-210ENST00000554974 XPNPEP3Q9NQH7 507 aa18.09■□□□□ 0.49
XRCC3-210ENST00000554974 ADAMTS5Q9UNA0 930 aa18.09■□□□□ 0.49
XRCC3-210ENST00000554974 VWA5AO00534 786 aa18.08■□□□□ 0.48
XRCC3-210ENST00000554974 SMARCA5O60264 1052 aaPredicted RBP18.08■□□□□ 0.48
XRCC3-210ENST00000554974 SLC25A27O95847 323 aa18.08■□□□□ 0.48
XRCC3-210ENST00000554974 TAL1P17542 331 aaPredicted RBP18.08■□□□□ 0.48
XRCC3-210ENST00000554974 UBE3CQ15386 1083 aa18.08■□□□□ 0.48
XRCC3-210ENST00000554974 C20orf194Q5TEA3 1177 aa18.08■□□□□ 0.48
XRCC3-210ENST00000554974 FAM109BQ6ICB4 259 aaPredicted RBP18.08■□□□□ 0.48
XRCC3-210ENST00000554974 RIOX2Q8IUF8 465 aa18.08■□□□□ 0.48
XRCC3-210ENST00000554974 STK11IPQ8N1F8 1099 aa18.08■□□□□ 0.48
XRCC3-210ENST00000554974 NUP88Q99567 741 aaPredicted RBP18.08■□□□□ 0.48
XRCC3-210ENST00000554974 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.08■□□□□ 0.48
XRCC3-210ENST00000554974 KANSL2Q9H9L4 492 aa18.08■□□□□ 0.48
XRCC3-210ENST00000554974 GOPCQ9HD26 462 aa18.08■□□□□ 0.48
XRCC3-210ENST00000554974 ZNF214Q9UL59 606 aaPredicted RBP18.08■□□□□ 0.48
XRCC3-210ENST00000554974 PPP1R9AQ9ULJ8 1098 aa18.08■□□□□ 0.48
XRCC3-210ENST00000554974 TRIM43BA6NCK2 446 aa18.07■□□□□ 0.48
XRCC3-210ENST00000554974 PGK1P00558 417 aa18.07■□□□□ 0.48
XRCC3-210ENST00000554974 RARBP10826 455 aa18.07■□□□□ 0.48
XRCC3-210ENST00000554974 KCTD2Q14681 263 aa18.07■□□□□ 0.48
XRCC3-210ENST00000554974 ZNF697Q5TEC3 545 aa18.07■□□□□ 0.48
XRCC3-210ENST00000554974 REPS2Q8NFH8 660 aa18.07■□□□□ 0.48
XRCC3-210ENST00000554974 TRIM43Q96BQ3 446 aaPredicted RBP18.07■□□□□ 0.48
XRCC3-210ENST00000554974 TINF2Q9BSI4 451 aa18.07■□□□□ 0.48
XRCC3-210ENST00000554974 VCANP13611 3396 aa18.07■□□□□ 0.48
XRCC3-210ENST00000554974 ROBO3Q96MS0 1386 aa18.06■□□□□ 0.48
XRCC3-210ENST00000554974 MYH4Q9Y623 1939 aa18.06■□□□□ 0.48
XRCC3-210ENST00000554974 STAT3P40763 770 aa18.06■□□□□ 0.48
XRCC3-210ENST00000554974 TLE2Q04725 743 aa18.06■□□□□ 0.48
XRCC3-210ENST00000554974 ZNF792Q3KQV3 632 aa18.06■□□□□ 0.48
XRCC3-210ENST00000554974 CHMP4BQ9H444 224 aaKnown RBP18.06■□□□□ 0.48
XRCC3-210ENST00000554974 ARPP21Q9UBL0 812 aaPredicted RBP18.06■□□□□ 0.48
XRCC3-210ENST00000554974 PHF24Q9UPV7 400 aa18.06■□□□□ 0.48
XRCC3-210ENST00000554974 ITGB8P26012 769 aa18.05■□□□□ 0.48
XRCC3-210ENST00000554974 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.05■□□□□ 0.48
XRCC3-210ENST00000554974 LRRCC1Q9C099 1032 aa18.05■□□□□ 0.48
XRCC3-210ENST00000554974 NRBP1Q9UHY1 535 aa18.05■□□□□ 0.48
XRCC3-210ENST00000554974 A0A1W2PQ45 241 aaPredicted RBP18.04■□□□□ 0.48
XRCC3-210ENST00000554974 A0A1W2PQY0 241 aa18.04■□□□□ 0.48
XRCC3-210ENST00000554974 ZNF865P0CJ78 1059 aaPredicted RBP18.04■□□□□ 0.48
XRCC3-210ENST00000554974 RASA1P20936 1047 aa18.04■□□□□ 0.48
XRCC3-210ENST00000554974 C1orf53Q5VUE5 145 aa18.04■□□□□ 0.48
XRCC3-210ENST00000554974 TSHZ3Q63HK5 1081 aa18.04■□□□□ 0.48
XRCC3-210ENST00000554974 ZSCAN25Q6NSZ9 544 aa18.04■□□□□ 0.48
XRCC3-210ENST00000554974 STRBPQ96SI9 672 aaKnown RBP18.04■□□□□ 0.48
XRCC3-210ENST00000554974 SLF1Q9BQI6 1058 aa18.04■□□□□ 0.48
XRCC3-210ENST00000554974 PQBP1O60828 265 aaKnown RBP18.03■□□□□ 0.48
XRCC3-210ENST00000554974 NDUFB10O96000 172 aa18.03■□□□□ 0.48
XRCC3-210ENST00000554974 SNRNP48Q6IEG0 339 aaKnown RBP18.03■□□□□ 0.48
XRCC3-210ENST00000554974 RNF180Q86T96 592 aa18.03■□□□□ 0.48
XRCC3-210ENST00000554974 CDX2Q99626 313 aaPredicted RBP18.03■□□□□ 0.48
XRCC3-210ENST00000554974 COL25A1Q9BXS0 654 aaPredicted RBP18.03■□□□□ 0.48
XRCC3-210ENST00000554974 TEX13BQ9BXU2 312 aa18.03■□□□□ 0.48
XRCC3-210ENST00000554974 DIS3Q9Y2L1 958 aaKnown RBP18.03■□□□□ 0.48
XRCC3-210ENST00000554974 RIPK3Q9Y572 518 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms