RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 MCM3APO60318 1980 aa12.69□□□□□ -0.38
SHMT2-215ENST00000554656 GSG1L2A8MUP6 293 aa12.69□□□□□ -0.38
SHMT2-215ENST00000554656 STRNO43815 780 aa12.69□□□□□ -0.38
SHMT2-215ENST00000554656 CNGA1P29973 690 aa12.69□□□□□ -0.38
SHMT2-215ENST00000554656 ANO1Q5XXA6 986 aa12.69□□□□□ -0.38
SHMT2-215ENST00000554656 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-215ENST00000554656 DPP9Q86TI2 863 aa12.69□□□□□ -0.38
SHMT2-215ENST00000554656 OSBP2Q969R2 916 aa12.69□□□□□ -0.38
SHMT2-215ENST00000554656 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
SHMT2-215ENST00000554656 EPB41L4AQ9HCS5 686 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-215ENST00000554656 RASA1P20936 1047 aa12.68□□□□□ -0.38
SHMT2-215ENST00000554656 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-215ENST00000554656 PLS1Q14651 629 aa12.68□□□□□ -0.38
SHMT2-215ENST00000554656 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
SHMT2-215ENST00000554656 NCAPG2Q86XI2 1143 aa12.68□□□□□ -0.38
SHMT2-215ENST00000554656 TDHQ8IZJ6 230 aa12.68□□□□□ -0.38
SHMT2-215ENST00000554656 KBTBD3Q8NAB2 608 aa12.68□□□□□ -0.38
SHMT2-215ENST00000554656 REPS2Q8NFH8 660 aa12.68□□□□□ -0.38
SHMT2-215ENST00000554656 UBE2OQ9C0C9 1292 aaKnown RBP12.68□□□□□ -0.38
SHMT2-215ENST00000554656 SENP6Q9GZR1 1112 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-215ENST00000554656 SH2D4AQ9H788 454 aa12.68□□□□□ -0.38
SHMT2-215ENST00000554656 ECHDC1Q9NTX5 307 aa12.68□□□□□ -0.38
SHMT2-215ENST00000554656 DNM1LO00429 736 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 MSCO60682 206 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-215ENST00000554656 RTP1P59025 263 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 LRIT3Q3SXY7 679 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 SBK1Q52WX2 424 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 FAM83BQ5T0W9 1011 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 GJC2Q5T442 439 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-215ENST00000554656 Q7L0L9 218 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 ABRAQ8N0Z2 381 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 STK11IPQ8N1F8 1099 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 MAML3Q96JK9 1138 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 NUP88Q99567 741 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-215ENST00000554656 MROH8Q9H579 483 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 DCTPP1Q9H773 170 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 KANSL2Q9H9L4 492 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 ARPP21Q9UBL0 812 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-215ENST00000554656 ZNF214Q9UL59 606 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-215ENST00000554656 PPP1R9AQ9ULJ8 1098 aa12.67□□□□□ -0.38
SHMT2-215ENST00000554656 M0R2C6 588 aa12.66□□□□□ -0.38
SHMT2-215ENST00000554656 VWA5AO00534 786 aa12.66□□□□□ -0.38
SHMT2-215ENST00000554656 SEPT4O43236 478 aa12.66□□□□□ -0.38
SHMT2-215ENST00000554656 HDAC1Q13547 482 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-215ENST00000554656 FAM47AQ5JRC9 791 aa12.66□□□□□ -0.38
SHMT2-215ENST00000554656 ZSCAN25Q6NSZ9 544 aa12.66□□□□□ -0.38
SHMT2-215ENST00000554656 RIOX2Q8IUF8 465 aa12.66□□□□□ -0.38
SHMT2-215ENST00000554656 AMOTL1Q8IY63 956 aa12.66□□□□□ -0.38
SHMT2-215ENST00000554656 APPBP2Q92624 585 aa12.66□□□□□ -0.38
SHMT2-215ENST00000554656 RWDD1Q9H446 243 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-215ENST00000554656 IGKV6D-41A0A0C4DH26 115 aa12.65□□□□□ -0.38
SHMT2-215ENST00000554656 GPAA1O43292 621 aa12.65□□□□□ -0.38
SHMT2-215ENST00000554656 SLC25A27O95847 323 aa12.65□□□□□ -0.38
SHMT2-215ENST00000554656 PGK2P07205 417 aa12.65□□□□□ -0.38
SHMT2-215ENST00000554656 FCER1AP12319 257 aa12.65□□□□□ -0.38
SHMT2-215ENST00000554656 TAL1P17542 331 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-215ENST00000554656 GPR153Q6NV75 609 aa12.65□□□□□ -0.38
SHMT2-215ENST00000554656 GIMAP6Q6P9H5 292 aa12.65□□□□□ -0.38
SHMT2-215ENST00000554656 OTUD7AQ8TE49 926 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-215ENST00000554656 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
SHMT2-215ENST00000554656 MMP19Q99542 508 aa12.65□□□□□ -0.38
SHMT2-215ENST00000554656 GOPCQ9HD26 462 aa12.65□□□□□ -0.38
SHMT2-215ENST00000554656 PCDHB15Q9Y5E8 787 aa12.65□□□□□ -0.38
SHMT2-215ENST00000554656 MINDY4BA8MYZ0 360 aa12.64□□□□□ -0.39
SHMT2-215ENST00000554656 RNF113AO15541 343 aaKnown RBP12.64□□□□□ -0.39
SHMT2-215ENST00000554656 NDUFB10O96000 172 aa12.64□□□□□ -0.39
SHMT2-215ENST00000554656 SNX17Q15036 470 aa12.64□□□□□ -0.39
SHMT2-215ENST00000554656 LRRC41Q15345 812 aa12.64□□□□□ -0.39
SHMT2-215ENST00000554656 ZNF792Q3KQV3 632 aa12.64□□□□□ -0.39
SHMT2-215ENST00000554656 DEFB123Q8N688 67 aa12.64□□□□□ -0.39
SHMT2-215ENST00000554656 PI4K2BQ8TCG2 481 aa12.64□□□□□ -0.39
SHMT2-215ENST00000554656 LENG1Q96BZ8 264 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-215ENST00000554656 SEC62Q99442 399 aaKnown RBP12.64□□□□□ -0.39
SHMT2-215ENST00000554656 NYAP2Q9P242 653 aa12.64□□□□□ -0.39
SHMT2-215ENST00000554656 LRRC37A2A6NM11 1700 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 LCTP09848 1927 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 KBTBD13C9JR72 458 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 RAD21O60216 631 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 PRDM1O75626 825 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 STAT3P40763 770 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 TRIM60Q495X7 471 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 SLC39A5Q6ZMH5 540 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 ARRDC4Q8NCT1 418 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 MTMR10Q9NXD2 777 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 ATP11BQ9Y2G3 1177 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 RIPK3Q9Y572 518 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 PLIN4Q96Q06 1357 aa12.63□□□□□ -0.39
SHMT2-215ENST00000554656 A0A0C4DFX4 3053 aa12.62□□□□□ -0.39
SHMT2-215ENST00000554656 F5H6K3 240 aa12.62□□□□□ -0.39
SHMT2-215ENST00000554656 FOXP2O15409 715 aa12.62□□□□□ -0.39
SHMT2-215ENST00000554656 ZNF865P0CJ78 1059 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-215ENST00000554656 ADCYAP1R1P41586 468 aa12.62□□□□□ -0.39
SHMT2-215ENST00000554656 KLRC3Q07444 240 aa12.62□□□□□ -0.39
SHMT2-215ENST00000554656 SH3RF1Q7Z6J0 888 aa12.62□□□□□ -0.39
SHMT2-215ENST00000554656 FERMT2Q96AC1 680 aa12.62□□□□□ -0.39
SHMT2-215ENST00000554656 CEP95Q96GE4 821 aa12.62□□□□□ -0.39
SHMT2-215ENST00000554656 GPATCH3Q96I76 525 aa12.62□□□□□ -0.39
SHMT2-215ENST00000554656 SLF1Q9BQI6 1058 aa12.62□□□□□ -0.39
SHMT2-215ENST00000554656 TINF2Q9BSI4 451 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms