RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 KANSL2Q9H9L4 492 aa29.15■■■□□ 2.26
FOXA1-204ENST00000554607 LAMA2P24043 3122 aaKnown RBP29.15■■■□□ 2.26
FOXA1-204ENST00000554607 ATP5JP18859 108 aa29.14■■■□□ 2.26
FOXA1-204ENST00000554607 SHHQ15465 462 aa29.14■■■□□ 2.26
FOXA1-204ENST00000554607 C16orf86Q6ZW13 317 aa29.14■■■□□ 2.26
FOXA1-204ENST00000554607 FAM161BQ96MY7 647 aa29.14■■■□□ 2.26
FOXA1-204ENST00000554607 DDX19BQ9UMR2 479 aa29.14■■■□□ 2.26
FOXA1-204ENST00000554607 DIS3Q9Y2L1 958 aaKnown RBP29.14■■■□□ 2.26
FOXA1-204ENST00000554607 LTBP2Q14767 1821 aa29.13■■■□□ 2.25
FOXA1-204ENST00000554607 USP17L12C9JPN9 530 aa29.13■■■□□ 2.25
FOXA1-204ENST00000554607 USP17L21D6R901 530 aa29.13■■■□□ 2.25
FOXA1-204ENST00000554607 RARBP10826 455 aa29.13■■■□□ 2.25
FOXA1-204ENST00000554607 EEF2P13639 858 aaKnown RBP29.13■■■□□ 2.25
FOXA1-204ENST00000554607 COPB2P35606 906 aa29.13■■■□□ 2.25
FOXA1-204ENST00000554607 KCTD2Q14681 263 aa29.13■■■□□ 2.25
FOXA1-204ENST00000554607 UBE3CQ15386 1083 aa29.13■■■□□ 2.25
FOXA1-204ENST00000554607 FAM47AQ5JRC9 791 aa29.13■■■□□ 2.25
FOXA1-204ENST00000554607 RIOX2Q8IUF8 465 aa29.13■■■□□ 2.25
FOXA1-204ENST00000554607 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.13■■■□□ 2.25
FOXA1-204ENST00000554607 BADQ92934 168 aa29.13■■■□□ 2.25
FOXA1-204ENST00000554607 FERMT2Q96AC1 680 aa29.13■■■□□ 2.25
FOXA1-204ENST00000554607 GOPCQ9HD26 462 aa29.13■■■□□ 2.25
FOXA1-204ENST00000554607 HAUS7Q99871 368 aa29.12■■■□□ 2.25
FOXA1-204ENST00000554607 CHMP4BQ9H444 224 aaKnown RBP29.12■■■□□ 2.25
FOXA1-204ENST00000554607 XPNPEP3Q9NQH7 507 aa29.12■■■□□ 2.25
FOXA1-204ENST00000554607 PDLIM7Q9NR12 457 aa29.12■■■□□ 2.25
FOXA1-204ENST00000554607 ZNFX1Q9P2E3 1918 aaKnown RBP29.12■■■□□ 2.25
FOXA1-204ENST00000554607 STAT3P40763 770 aa29.11■■■□□ 2.25
FOXA1-204ENST00000554607 SLFNL1Q499Z3 407 aa29.11■■■□□ 2.25
FOXA1-204ENST00000554607 ZSCAN25Q6NSZ9 544 aa29.11■■■□□ 2.25
FOXA1-204ENST00000554607 RNF180Q86T96 592 aa29.11■■■□□ 2.25
FOXA1-204ENST00000554607 SIRT2Q8IXJ6 389 aa29.11■■■□□ 2.25
FOXA1-204ENST00000554607 TINF2Q9BSI4 451 aa29.11■■■□□ 2.25
FOXA1-204ENST00000554607 ZBTB40Q9NUA8 1239 aa29.11■■■□□ 2.25
FOXA1-204ENST00000554607 PHF24Q9UPV7 400 aa29.11■■■□□ 2.25
FOXA1-204ENST00000554607 BAZ2AQ9UIF9 1905 aaKnown RBP29.1■■■□□ 2.25
FOXA1-204ENST00000554607 CYP2D7A0A087X1C5 515 aa29.1■■■□□ 2.25
FOXA1-204ENST00000554607 C9orf50Q5SZB4 431 aa29.1■■■□□ 2.25
FOXA1-204ENST00000554607 PPP1R9AQ9ULJ8 1098 aa29.1■■■□□ 2.25
FOXA1-204ENST00000554607 TACC3Q9Y6A5 838 aa29.1■■■□□ 2.25
FOXA1-204ENST00000554607 SLC4A4Q9Y6R1 1079 aa29.1■■■□□ 2.25
FOXA1-204ENST00000554607 VWA5AO00534 786 aa29.09■■■□□ 2.25
FOXA1-204ENST00000554607 TLE2Q04725 743 aa29.09■■■□□ 2.25
FOXA1-204ENST00000554607 FBXO28Q9NVF7 368 aa29.09■■■□□ 2.25
FOXA1-204ENST00000554607 UNC80Q8N2C7 3258 aa29.09■■■□□ 2.25
FOXA1-204ENST00000554607 PARP14Q460N5 1801 aa29.08■■■□□ 2.25
FOXA1-204ENST00000554607 TRIM43BA6NCK2 446 aa29.08■■■□□ 2.25
FOXA1-204ENST00000554607 PGK2P07205 417 aa29.08■■■□□ 2.25
FOXA1-204ENST00000554607 SMAD3P84022 425 aaKnown RBP29.08■■■□□ 2.25
FOXA1-204ENST00000554607 ZNF792Q3KQV3 632 aa29.08■■■□□ 2.25
FOXA1-204ENST00000554607 SH3RF1Q7Z6J0 888 aa29.08■■■□□ 2.25
FOXA1-204ENST00000554607 TRIM43Q96BQ3 446 aaPredicted RBP29.08■■■□□ 2.25
FOXA1-204ENST00000554607 SEMA6BQ9H3T3 888 aa29.08■■■□□ 2.25
FOXA1-204ENST00000554607 SMCHD1A6NHR9 2005 aa29.07■■■□□ 2.24
FOXA1-204ENST00000554607 SMIM22K7EJ46 135 aa29.07■■■□□ 2.24
FOXA1-204ENST00000554607 RAD21O60216 631 aa29.07■■■□□ 2.24
FOXA1-204ENST00000554607 CTR9Q6PD62 1173 aa29.07■■■□□ 2.24
FOXA1-204ENST00000554607 ZBED9Q6R2W3 1325 aa29.07■■■□□ 2.24
FOXA1-204ENST00000554607 CDX2Q99626 313 aaPredicted RBP29.07■■■□□ 2.24
FOXA1-204ENST00000554607 COL25A1Q9BXS0 654 aaPredicted RBP29.07■■■□□ 2.24
FOXA1-204ENST00000554607 AKR1A1P14550 325 aa29.06■■■□□ 2.24
FOXA1-204ENST00000554607 ARPP21Q9UBL0 812 aaPredicted RBP29.06■■■□□ 2.24
FOXA1-204ENST00000554607 ZNF214Q9UL59 606 aaPredicted RBP29.06■■■□□ 2.24
FOXA1-204ENST00000554607 CNPY2Q9Y2B0 182 aa29.06■■■□□ 2.24
FOXA1-204ENST00000554607 COG6Q9Y2V7 657 aa29.06■■■□□ 2.24
FOXA1-204ENST00000554607 ROBO3Q96MS0 1386 aa29.05■■■□□ 2.24
FOXA1-204ENST00000554607 PGK1P00558 417 aa29.05■■■□□ 2.24
FOXA1-204ENST00000554607 CLTBP09497 229 aa29.05■■■□□ 2.24
FOXA1-204ENST00000554607 FAM83BQ5T0W9 1011 aa29.05■■■□□ 2.24
FOXA1-204ENST00000554607 MSL3Q8N5Y2 521 aaKnown RBP29.05■■■□□ 2.24
FOXA1-204ENST00000554607 COL11A1P12107 1806 aaPredicted RBP29.05■■■□□ 2.24
FOXA1-204ENST00000554607 ZNF865P0CJ78 1059 aaPredicted RBP29.04■■■□□ 2.24
FOXA1-204ENST00000554607 REPS2Q8NFH8 660 aa29.04■■■□□ 2.24
FOXA1-204ENST00000554607 TSEN34Q9BSV6 310 aaKnown RBP29.04■■■□□ 2.24
FOXA1-204ENST00000554607 TAL1P17542 331 aaPredicted RBP29.03■■■□□ 2.24
FOXA1-204ENST00000554607 PUS7LQ9H0K6 701 aaKnown RBP29.03■■■□□ 2.24
FOXA1-204ENST00000554607 A0A1W2PQ45 241 aaPredicted RBP29.02■■■□□ 2.24
FOXA1-204ENST00000554607 A0A1W2PQY0 241 aa29.02■■■□□ 2.24
FOXA1-204ENST00000554607 KIAA0355O15063 1070 aa29.02■■■□□ 2.24
FOXA1-204ENST00000554607 SLF1Q9BQI6 1058 aa29.02■■■□□ 2.24
FOXA1-204ENST00000554607 TEX13BQ9BXU2 312 aa29.02■■■□□ 2.24
FOXA1-204ENST00000554607 PLXNA1Q9UIW2 1896 aa29.02■■■□□ 2.24
FOXA1-204ENST00000554607 CHGBP05060 677 aa29.01■■■□□ 2.23
FOXA1-204ENST00000554607 RAG1P15918 1043 aa29.01■■■□□ 2.23
FOXA1-204ENST00000554607 SBK1Q52WX2 424 aa29.01■■■□□ 2.23
FOXA1-204ENST00000554607 MIER1Q8N108 512 aa29.01■■■□□ 2.23
FOXA1-204ENST00000554607 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.01■■■□□ 2.23
FOXA1-204ENST00000554607 LRRCC1Q9C099 1032 aa29.01■■■□□ 2.23
FOXA1-204ENST00000554607 MKNK2Q9HBH9 465 aa29.01■■■□□ 2.23
FOXA1-204ENST00000554607 NYAP2Q9P242 653 aa29.01■■■□□ 2.23
FOXA1-204ENST00000554607 MYH7P12883 1935 aa29■■■□□ 2.23
FOXA1-204ENST00000554607 PQBP1O60828 265 aaKnown RBP29■■■□□ 2.23
FOXA1-204ENST00000554607 GIMAP6Q6P9H5 292 aa29■■■□□ 2.23
FOXA1-204ENST00000554607 NUP133Q8WUM0 1156 aa29■■■□□ 2.23
FOXA1-204ENST00000554607 DDX11Q96FC9 970 aa29■■■□□ 2.23
FOXA1-204ENST00000554607 RNPC3Q96LT9 517 aaKnown RBP29■■■□□ 2.23
FOXA1-204ENST00000554607 TOX2Q96NM4 488 aa29■■■□□ 2.23
FOXA1-204ENST00000554607 TMEM39AQ9NV64 488 aa29■■■□□ 2.23
FOXA1-204ENST00000554607 FAM184BQ9ULE4 1060 aa29■■■□□ 2.23
FOXA1-204ENST00000554607 SYNGAP1Q96PV0 1343 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms