RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 F5H6K3 240 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 TTLL1O95922 423 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 KLRC3Q07444 240 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 POTEEQ6S8J3 1075 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 MB21D1Q8N884 522 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 PXYLP1Q8TE99 480 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 SOCS4Q8WXH5 440 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 MTMR4Q9NYA4 1195 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 ANAPC4Q9UJX5 808 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 GJD2Q9UKL4 321 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 STX8Q9UNK0 236 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 MTMR7Q9Y216 660 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.63□□□□□ -0.39
SHMT2-213ENST00000554600 CTDP1Q9Y5B0 961 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-213ENST00000554600 MCM3APO60318 1980 aa12.63□□□□□ -0.39
SHMT2-213ENST00000554600 FRMPD3Q5JV73 1810 aa12.62□□□□□ -0.39
SHMT2-213ENST00000554600 PLIN4Q96Q06 1357 aa12.62□□□□□ -0.39
SHMT2-213ENST00000554600 IGKV6D-41A0A0C4DH26 115 aa12.62□□□□□ -0.39
SHMT2-213ENST00000554600 NDUFB10O96000 172 aa12.62□□□□□ -0.39
SHMT2-213ENST00000554600 HMGCRP04035 888 aa12.62□□□□□ -0.39
SHMT2-213ENST00000554600 GSPT1P15170 499 aaKnown RBP12.62□□□□□ -0.39
SHMT2-213ENST00000554600 RGS2P41220 211 aa12.62□□□□□ -0.39
SHMT2-213ENST00000554600 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
SHMT2-213ENST00000554600 NCAPG2Q86XI2 1143 aa12.62□□□□□ -0.39
SHMT2-213ENST00000554600 MOV10L1Q9BXT6 1211 aaKnown RBP12.62□□□□□ -0.39
SHMT2-213ENST00000554600 SPATC1LQ9H0A9 340 aa12.62□□□□□ -0.39
SHMT2-213ENST00000554600 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
SHMT2-213ENST00000554600 ZMYM6O95789 1325 aa12.62□□□□□ -0.39
SHMT2-213ENST00000554600 ZNF236Q9UL36 1845 aa12.61□□□□□ -0.39
SHMT2-213ENST00000554600 ORC4O43929 436 aa12.61□□□□□ -0.39
SHMT2-213ENST00000554600 NMT2O60551 498 aa12.61□□□□□ -0.39
SHMT2-213ENST00000554600 NEFLP07196 543 aa12.61□□□□□ -0.39
SHMT2-213ENST00000554600 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-213ENST00000554600 SLC4A3P48751 1232 aa12.61□□□□□ -0.39
SHMT2-213ENST00000554600 IKQ13123 557 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-213ENST00000554600 SLFN13Q68D06 897 aa12.61□□□□□ -0.39
SHMT2-213ENST00000554600 MFSD6Q6ZSS7 791 aa12.61□□□□□ -0.39
SHMT2-213ENST00000554600 SLF1Q9BQI6 1058 aa12.61□□□□□ -0.39
SHMT2-213ENST00000554600 PPP1R9AQ9ULJ8 1098 aa12.61□□□□□ -0.39
SHMT2-213ENST00000554600 TACC3Q9Y6A5 838 aa12.61□□□□□ -0.39
SHMT2-213ENST00000554600 SLC15A5A6NIM6 579 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 ZNF213O14771 459 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 GJB1P08034 283 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 ERCC3P19447 782 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 PTPREP23469 700 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 MORN1Q5T089 497 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 AKNAD1Q5T1N1 836 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 TRMT44Q8IYL2 757 aaKnown RBP12.6□□□□□ -0.39
SHMT2-213ENST00000554600 NKX2-3Q8TAU0 364 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 RUFY2Q8WXA3 655 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 TRIB2Q92519 343 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 MKL1Q969V6 931 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 KIFC2Q96AC6 838 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 APBA2Q99767 749 aa12.6□□□□□ -0.39
SHMT2-213ENST00000554600 RNF41Q9H4P4 317 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-213ENST00000554600 VWA5AO00534 786 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 BMP3P12645 472 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 STAT3P40763 770 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 TRIM32Q13049 653 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 TMEM132BQ14DG7 1078 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 CCL14Q16627 93 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 IMMTQ16891 758 aaKnown RBP12.59□□□□□ -0.39
SHMT2-213ENST00000554600 CENPQQ7L2Z9 268 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-213ENST00000554600 DPP9Q86TI2 863 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 TBC1D10CQ8IV04 446 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 CPXCR1Q8N123 301 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 GMCL1P1Q8NEA9 526 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 SHCBP1Q8NEM2 672 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 U2AF1L4Q8WU68 220 aaKnown RBP12.59□□□□□ -0.39
SHMT2-213ENST00000554600 DEFB118Q96PH6 123 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 DSCC1Q9BVC3 393 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.59□□□□□ -0.396e-7■□□□□ 9.5
SHMT2-213ENST00000554600 MROH8Q9H579 483 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 IL17RBQ9NRM6 502 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 CTNNA3Q9UI47 895 aa12.59□□□□□ -0.39
SHMT2-213ENST00000554600 TMEM232C9JQI7 657 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 ZBED4O75132 1171 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 SLC25A27O95847 323 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 TFRCP02786 760 aaKnown RBP12.58□□□□□ -0.4
SHMT2-213ENST00000554600 FGRP09769 529 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 XRCC5P13010 732 aaKnown RBP12.58□□□□□ -0.4
SHMT2-213ENST00000554600 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
SHMT2-213ENST00000554600 MCCP23508 829 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 CHMLP26374 656 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 SLC1A4P43007 532 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 CCDC96Q2M329 555 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 PRPF38AQ8NAV1 312 aaKnown RBP12.58□□□□□ -0.4
SHMT2-213ENST00000554600 STAG1Q8WVM7 1258 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 ESR2Q92731 530 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 USP6NLQ92738 828 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 CCDC136Q96JN2 1154 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 NBPF3Q9H094 633 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 HMX1Q9NP08 348 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-213ENST00000554600 FEM1BQ9UK73 627 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 SYNPO2Q9UMS6 1093 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 NEDD4P46934 1319 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 RAD50Q92878 1312 aa12.58□□□□□ -0.4
SHMT2-213ENST00000554600 BAZ2BQ9UIF8 2168 aaKnown RBP12.57□□□□□ -0.4
SHMT2-213ENST00000554600 STRNO43815 780 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms