RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, human

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-215	ENST00000554567	ABRA	Q8N0Z2	381 aa		31.93	■■■□□ 2.7
KTN1-215	ENST00000554567	MAML3	Q96JK9	1138 aa		31.93	■■■□□ 2.7
KTN1-215	ENST00000554567	PRDM5	Q9NQX1	630 aa	Predicted RBP	31.93	■■■□□ 2.7
KTN1-215	ENST00000554567	C16orf86	Q6ZW13	317 aa		31.92	■■■□□ 2.7
KTN1-215	ENST00000554567	FERMT2	Q96AC1	680 aa		31.92	■■■□□ 2.7
KTN1-215	ENST00000554567	FBXO28	Q9NVF7	368 aa		31.92	■■■□□ 2.7
KTN1-215	ENST00000554567	ADCYAP1R1	P41586	468 aa		31.91	■■■□□ 2.7
KTN1-215	ENST00000554567		A0A0C4DFX4	3053 aa		31.91	■■■□□ 2.7
KTN1-215	ENST00000554567	SLC25A27	O95847	323 aa		31.9	■■■□□ 2.7
KTN1-215	ENST00000554567	UBE3C	Q15386	1083 aa		31.9	■■■□□ 2.7
KTN1-215	ENST00000554567	DIEXF	Q68CQ4	756 aa	Known RBP	31.9	■■■□□ 2.7
KTN1-215	ENST00000554567	FAM161B	Q96MY7	647 aa		31.9	■■■□□ 2.7
KTN1-215	ENST00000554567	MMP19	Q99542	508 aa		31.9	■■■□□ 2.7
KTN1-215	ENST00000554567	KANSL2	Q9H9L4	492 aa		31.9	■■■□□ 2.7
KTN1-215	ENST00000554567	PGK2	P07205	417 aa		31.89	■■■□□ 2.7
KTN1-215	ENST00000554567	TRIM60	Q495X7	471 aa		31.89	■■■□□ 2.7
KTN1-215	ENST00000554567	FAM47A	Q5JRC9	791 aa		31.89	■■■□□ 2.7
KTN1-215	ENST00000554567	CTR9	Q6PD62	1173 aa		31.89	■■■□□ 2.7
KTN1-215	ENST00000554567	POTEB2	H3BUK9	544 aa		31.88	■■■□□ 2.69
KTN1-215	ENST00000554567	LRRC41	Q15345	812 aa		31.88	■■■□□ 2.69
KTN1-215	ENST00000554567	PUS7L	Q9H0K6	701 aa	Known RBP	31.88	■■■□□ 2.69
KTN1-215	ENST00000554567	GOPC	Q9HD26	462 aa		31.88	■■■□□ 2.69
KTN1-215	ENST00000554567	ZNFX1	Q9P2E3	1918 aa	Known RBP	31.88	■■■□□ 2.69
KTN1-215	ENST00000554567	ZSCAN25	Q6NSZ9	544 aa		31.87	■■■□□ 2.69
KTN1-215	ENST00000554567	STK11IP	Q8N1F8	1099 aa		31.87	■■■□□ 2.69
KTN1-215	ENST00000554567	CHMP4B	Q9H444	224 aa	Known RBP	31.87	■■■□□ 2.69
KTN1-215	ENST00000554567	SMARCA5	O60264	1052 aa	Predicted RBP	31.86	■■■□□ 2.69
KTN1-215	ENST00000554567	KCTD2	Q14681	263 aa		31.86	■■■□□ 2.69
KTN1-215	ENST00000554567	FAM83B	Q5T0W9	1011 aa		31.86	■■■□□ 2.69
KTN1-215	ENST00000554567	RIOX2	Q8IUF8	465 aa		31.86	■■■□□ 2.69
KTN1-215	ENST00000554567	ADAMTS5	Q9UNA0	930 aa		31.86	■■■□□ 2.69
KTN1-215	ENST00000554567	COL11A1	P12107	1806 aa	Predicted RBP	31.85	■■■□□ 2.69
KTN1-215	ENST00000554567	PARP14	Q460N5	1801 aa		31.85	■■■□□ 2.69
KTN1-215	ENST00000554567	VWA5A	O00534	786 aa		31.85	■■■□□ 2.69
KTN1-215	ENST00000554567	STAT3	P40763	770 aa		31.85	■■■□□ 2.69
KTN1-215	ENST00000554567	SHH	Q15465	462 aa		31.85	■■■□□ 2.69
KTN1-215	ENST00000554567	BAD	Q92934	168 aa		31.85	■■■□□ 2.69
KTN1-215	ENST00000554567	LRRCC1	Q9C099	1032 aa		31.85	■■■□□ 2.69
KTN1-215	ENST00000554567	FAM109B	Q6ICB4	259 aa	Predicted RBP	31.84	■■■□□ 2.69
KTN1-215	ENST00000554567	XPNPEP3	Q9NQH7	507 aa		31.84	■■■□□ 2.69
KTN1-215	ENST00000554567	PPP1R9A	Q9ULJ8	1098 aa		31.84	■■■□□ 2.69
KTN1-215	ENST00000554567	RARB	P10826	455 aa		31.83	■■■□□ 2.69
KTN1-215	ENST00000554567	SH3RF1	Q7Z6J0	888 aa		31.83	■■■□□ 2.69
KTN1-215	ENST00000554567	GUCD1	Q96NT3	240 aa		31.83	■■■□□ 2.69
KTN1-215	ENST00000554567	TINF2	Q9BSI4	451 aa		31.83	■■■□□ 2.69
KTN1-215	ENST00000554567	SMCHD1	A6NHR9	2005 aa		31.83	■■■□□ 2.69
KTN1-215	ENST00000554567	MYH7	P12883	1935 aa		31.83	■■■□□ 2.69
KTN1-215	ENST00000554567	LTBP2	Q14767	1821 aa		31.82	■■■□□ 2.68
KTN1-215	ENST00000554567	TAL1	P17542	331 aa	Predicted RBP	31.82	■■■□□ 2.68
KTN1-215	ENST00000554567	SNX17	Q15036	470 aa		31.82	■■■□□ 2.68
KTN1-215	ENST00000554567	C9orf50	Q5SZB4	431 aa		31.82	■■■□□ 2.68
KTN1-215	ENST00000554567	PDLIM7	Q9NR12	457 aa		31.82	■■■□□ 2.68
KTN1-215	ENST00000554567	PGK1	P00558	417 aa		31.81	■■■□□ 2.68
KTN1-215	ENST00000554567	ZNF792	Q3KQV3	632 aa		31.81	■■■□□ 2.68
KTN1-215	ENST00000554567	ZNF697	Q5TEC3	545 aa		31.81	■■■□□ 2.68
KTN1-215	ENST00000554567	NUP88	Q99567	741 aa	Predicted RBP	31.81	■■■□□ 2.68
KTN1-215	ENST00000554567	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	31.81	■■■□□ 2.68
KTN1-215	ENST00000554567	ARPP21	Q9UBL0	812 aa	Predicted RBP	31.81	■■■□□ 2.68
KTN1-215	ENST00000554567	ZNF214	Q9UL59	606 aa	Predicted RBP	31.81	■■■□□ 2.68
KTN1-215	ENST00000554567	TRIM43B	A6NCK2	446 aa		31.8	■■■□□ 2.68
KTN1-215	ENST00000554567	TLE2	Q04725	743 aa		31.8	■■■□□ 2.68
KTN1-215	ENST00000554567	TRIM43	Q96BQ3	446 aa	Predicted RBP	31.8	■■■□□ 2.68
KTN1-215	ENST00000554567	STRBP	Q96SI9	672 aa	Known RBP	31.8	■■■□□ 2.68
KTN1-215	ENST00000554567	MKNK2	Q9HBH9	465 aa		31.8	■■■□□ 2.68
KTN1-215	ENST00000554567	NRBP1	Q9UHY1	535 aa		31.8	■■■□□ 2.68
KTN1-215	ENST00000554567	LAMA2	P24043	3122 aa	Known RBP	31.79	■■■□□ 2.68
KTN1-215	ENST00000554567	MINDY4B	A8MYZ0	360 aa		31.79	■■■□□ 2.68
KTN1-215	ENST00000554567	SLC4A3	P48751	1232 aa		31.79	■■■□□ 2.68
KTN1-215	ENST00000554567	RNF180	Q86T96	592 aa		31.79	■■■□□ 2.68
KTN1-215	ENST00000554567	RCAN3	Q9UKA8	241 aa		31.79	■■■□□ 2.68
KTN1-215	ENST00000554567	PHF24	Q9UPV7	400 aa		31.79	■■■□□ 2.68
KTN1-215	ENST00000554567	DIS3	Q9Y2L1	958 aa	Known RBP	31.79	■■■□□ 2.68
KTN1-215	ENST00000554567	REPS2	Q8NFH8	660 aa		31.78	■■■□□ 2.68
KTN1-215	ENST00000554567	CUL9	Q8IWT3	2517 aa		31.78	■■■□□ 2.68
KTN1-215	ENST00000554567	RASA1	P20936	1047 aa		31.77	■■■□□ 2.68
KTN1-215	ENST00000554567	COPB2	P35606	906 aa		31.77	■■■□□ 2.68
KTN1-215	ENST00000554567	C20orf194	Q5TEA3	1177 aa		31.77	■■■□□ 2.68
KTN1-215	ENST00000554567	C1orf53	Q5VUE5	145 aa		31.77	■■■□□ 2.68
KTN1-215	ENST00000554567	LENG1	Q96BZ8	264 aa	Predicted RBP	31.77	■■■□□ 2.68
KTN1-215	ENST00000554567	SLF1	Q9BQI6	1058 aa		31.77	■■■□□ 2.68
KTN1-215	ENST00000554567	ECHDC1	Q9NTX5	307 aa		31.77	■■■□□ 2.68
KTN1-215	ENST00000554567	CNPY2	Q9Y2B0	182 aa		31.77	■■■□□ 2.68
KTN1-215	ENST00000554567	PLXNA1	Q9UIW2	1896 aa		31.76	■■■□□ 2.68
KTN1-215	ENST00000554567	UNC80	Q8N2C7	3258 aa		31.76	■■■□□ 2.67
KTN1-215	ENST00000554567	GSG1L2	A8MUP6	293 aa		31.76	■■■□□ 2.67
KTN1-215	ENST00000554567	ZNF865	P0CJ78	1059 aa	Predicted RBP	31.76	■■■□□ 2.67
KTN1-215	ENST00000554567		F5H6K3	240 aa		31.75	■■■□□ 2.67
KTN1-215	ENST00000554567	AKR1A1	P14550	325 aa		31.75	■■■□□ 2.67
KTN1-215	ENST00000554567	KLRC3	Q07444	240 aa		31.75	■■■□□ 2.67
KTN1-215	ENST00000554567	SBK1	Q52WX2	424 aa		31.75	■■■□□ 2.67
KTN1-215	ENST00000554567	SNRNP48	Q6IEG0	339 aa	Known RBP	31.75	■■■□□ 2.67
KTN1-215	ENST00000554567	DDX11	Q96FC9	970 aa		31.75	■■■□□ 2.67
KTN1-215	ENST00000554567	TACC3	Q9Y6A5	838 aa		31.75	■■■□□ 2.67
KTN1-215	ENST00000554567	CPXCR1	Q8N123	301 aa		31.74	■■■□□ 2.67
KTN1-215	ENST00000554567	OSBP2	Q969R2	916 aa		31.74	■■■□□ 2.67
KTN1-215	ENST00000554567	TEX13B	Q9BXU2	312 aa		31.74	■■■□□ 2.67
KTN1-215	ENST00000554567	NYAP2	Q9P242	653 aa		31.74	■■■□□ 2.67
KTN1-215	ENST00000554567	CLIP2	Q9UDT6	1046 aa		31.74	■■■□□ 2.67
KTN1-215	ENST00000554567	RIPK3	Q9Y572	518 aa		31.74	■■■□□ 2.67
KTN1-215	ENST00000554567		A0A1W2PQ45	241 aa	Predicted RBP	31.73	■■■□□ 2.67

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