RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 KIAA1755Q5JYT7 1200 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 CCDC129Q6ZRS4 1044 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 CLEC10AQ8IUN9 316 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 SH3TC2Q8TF17 1288 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.97□□□□□ -0.97
LINC00640-201ENST00000554409 MKNK2Q9HBH9 465 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.97□□□□□ -0.97
LINC00640-201ENST00000554409 NYAP2Q9P242 653 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 ANAPC4Q9UJX5 808 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 GJD2Q9UKL4 321 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 SYNPO2Q9UMS6 1093 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 BOLA1Q9Y3E2 137 aa8.97□□□□□ -0.97
LINC00640-201ENST00000554409 TRIM6-TRIM34B2RNG4 842 aa8.96□□□□□ -0.98
LINC00640-201ENST00000554409 MFAP1P55081 439 aaKnown RBP8.96□□□□□ -0.98
LINC00640-201ENST00000554409 CCNA1P78396 465 aa8.96□□□□□ -0.98
LINC00640-201ENST00000554409 IRX6P78412 446 aaPredicted RBP8.96□□□□□ -0.98
LINC00640-201ENST00000554409 PDE4BQ07343 736 aa8.96□□□□□ -0.98
LINC00640-201ENST00000554409 NMIQ13287 307 aaPredicted RBP8.96□□□□□ -0.98
LINC00640-201ENST00000554409 COG2Q14746 738 aa8.96□□□□□ -0.98
LINC00640-201ENST00000554409 Q3C1V9 767 aa8.96□□□□□ -0.98
LINC00640-201ENST00000554409 SOCS4Q8WXH5 440 aa8.96□□□□□ -0.98
LINC00640-201ENST00000554409 RILPL2Q969X0 211 aa8.96□□□□□ -0.98
LINC00640-201ENST00000554409 FAM227BQ96M60 508 aa8.96□□□□□ -0.98
LINC00640-201ENST00000554409 PAGR1Q9BTK6 254 aa8.96□□□□□ -0.98
LINC00640-201ENST00000554409 TANGO6Q9C0B7 1094 aa8.96□□□□□ -0.98
LINC00640-201ENST00000554409 GOPCQ9HD26 462 aa8.96□□□□□ -0.98
LINC00640-201ENST00000554409 RYDENQ9NUL5 291 aaKnown RBP8.96□□□□□ -0.98
LINC00640-201ENST00000554409 HOXC10Q9NYD6 342 aa8.96□□□□□ -0.98
LINC00640-201ENST00000554409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.96□□□□□ -0.98
LINC00640-201ENST00000554409 HIP1O00291 1037 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 PEX10O60683 326 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 FGRP09769 529 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 HSPD1P10809 573 aaKnown RBP8.95□□□□□ -0.98
LINC00640-201ENST00000554409 XRCC5P13010 732 aaKnown RBP8.95□□□□□ -0.98
LINC00640-201ENST00000554409 SDSP20132 328 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 PDE4AP27815 886 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 UBXN2AP68543 259 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 MORN1Q5T089 497 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 VPS53Q5VIR6 699 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 GPR142Q7Z601 462 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 ZNF589Q86UQ0 364 aaPredicted RBP8.95□□□□□ -0.98
LINC00640-201ENST00000554409 ZNF444Q8N0Y2 327 aaPredicted RBP8.95□□□□□ -0.98
LINC00640-201ENST00000554409 STK11IPQ8N1F8 1099 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 MB21D1Q8N884 522 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 NEDD1Q8NHV4 660 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 USP6NLQ92738 828 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 MKL1Q969V6 931 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 MFRPQ9BY79 579 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 PORCNQ9H237 461 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 MTMR4Q9NYA4 1195 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 BTBD7Q9P203 1132 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 CCDC171Q6TFL3 1326 aa8.95□□□□□ -0.98
LINC00640-201ENST00000554409 ORC4O43929 436 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 PRDM1O75626 825 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 FLOT1O75955 427 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 HMGCRP04035 888 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 INHAP05111 366 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 TSPY3P0CV98 308 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 TSPY8P0CW00 308 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 CCL5P13501 91 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 ELNP15502 786 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 CAPN2P17655 700 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 EN2P19622 333 aaPredicted RBP8.94□□□□□ -0.98
LINC00640-201ENST00000554409 MTFR1Q15390 333 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 PPP4R3BQ5MIZ7 849 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 PLEKHH3Q7Z736 793 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 TRMT44Q8IYL2 757 aaKnown RBP8.94□□□□□ -0.98
LINC00640-201ENST00000554409 SPICE1Q8N0Z3 855 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 SHCBP1Q8NEM2 672 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 NKX2-3Q8TAU0 364 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 NUDT12Q9BQG2 462 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 ADAMTS5Q9UNA0 930 aa8.94□□□□□ -0.98
LINC00640-201ENST00000554409 SLC15A5A6NIM6 579 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 TTLL1O95922 423 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 FGAP02671 866 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 GJB1P08034 283 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 GSPT1P15170 499 aaKnown RBP8.93□□□□□ -0.98
LINC00640-201ENST00000554409 RGS2P41220 211 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 GJA8P48165 433 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 ATP2B2Q01814 1243 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 CTDSPL2Q05D32 466 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 TTC22Q5TAA0 569 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 CCAR1Q8IX12 1150 aaKnown RBP8.93□□□□□ -0.98
LINC00640-201ENST00000554409 GMCL1P1Q8NEA9 526 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 FBXO22Q8NEZ5 403 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 ATG4CQ96DT6 458 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 CEP95Q96GE4 821 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 APBA2Q99767 749 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 SPATC1LQ9H0A9 340 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 PAK6Q9NQU5 681 aaPredicted RBP8.93□□□□□ -0.98
LINC00640-201ENST00000554409 DIAPH3Q9NSV4 1193 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 BIN2Q9UBW5 565 aaPredicted RBP8.93□□□□□ -0.98
LINC00640-201ENST00000554409 CLIP2Q9UDT6 1046 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 TACC3Q9Y6A5 838 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 FRMPD3Q5JV73 1810 aa8.93□□□□□ -0.98
LINC00640-201ENST00000554409 KIAA0100Q14667 2235 aaKnown RBP8.93□□□□□ -0.98
LINC00640-201ENST00000554409 ZNFX1Q9P2E3 1918 aaKnown RBP8.92□□□□□ -0.98
LINC00640-201ENST00000554409 RAD50Q92878 1312 aa8.92□□□□□ -0.98
LINC00640-201ENST00000554409 TSPY2A6NKD2 308 aa8.92□□□□□ -0.98
LINC00640-201ENST00000554409 F5H6K3 240 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms