RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 MAPK4P31152 587 aa10.99□□□□□ -0.65
CHD8-206ENST00000553870 ERVK-9P63128 1117 aa10.99□□□□□ -0.65
CHD8-206ENST00000553870 ERVK-24P63145 666 aa10.99□□□□□ -0.65
CHD8-206ENST00000553870 PRPF38AQ8NAV1 312 aaKnown RBP10.99□□□□□ -0.65
CHD8-206ENST00000553870 CHURC1Q8WUH1 139 aa10.99□□□□□ -0.65
CHD8-206ENST00000553870 COA7Q96BR5 231 aa10.99□□□□□ -0.65
CHD8-206ENST00000553870 ZSCAN10Q96SZ4 725 aaPredicted RBP10.99□□□□□ -0.65
CHD8-206ENST00000553870 MCOLN1Q9GZU1 580 aa10.99□□□□□ -0.65
CHD8-206ENST00000553870 SRRDQ9UH36 339 aa10.99□□□□□ -0.65
CHD8-206ENST00000553870 PTPN22Q9Y2R2 807 aa10.99□□□□□ -0.65
CHD8-206ENST00000553870 NEDD4P46934 1319 aa10.99□□□□□ -0.65
CHD8-206ENST00000553870 B4E1Z4 1266 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 E7EWF7 191 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 NMT2O60551 498 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 BMP3P12645 472 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 SLC1A4P43007 532 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 Q3C1V9 767 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 TSGA10IPQ3SY00 556 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 FAM83BQ5T0W9 1011 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 RALYLQ86SE5 291 aaKnown RBP10.98□□□□□ -0.65
CHD8-206ENST00000553870 FAM160B2Q86V87 743 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 CCAR1Q8IX12 1150 aaKnown RBP10.98□□□□□ -0.65
CHD8-206ENST00000553870 LRRC47Q8N1G4 583 aaKnown RBP10.98□□□□□ -0.65
CHD8-206ENST00000553870 SHCBP1Q8NEM2 672 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 DCAF4Q8WV16 495 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 TRIM47Q96LD4 638 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 SLF1Q9BQI6 1058 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 TMEM47Q9BQJ4 181 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 UBAC1Q9BSL1 405 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 TXNRD2Q9NNW7 524 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 PPP1R9AQ9ULJ8 1098 aa10.98□□□□□ -0.65
CHD8-206ENST00000553870 ERICH2A1L162 156 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 VWA5AO00534 786 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 TNPO2O14787 897 aaKnown RBP10.97□□□□□ -0.65
CHD8-206ENST00000553870 SLC27A2O14975 620 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 STRNO43815 780 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 CNMDO75829 334 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 ZKSCAN1P17029 563 aaPredicted RBP10.97□□□□□ -0.65
CHD8-206ENST00000553870 MCCP23508 829 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 CTGFP29279 349 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 COPB2P35606 906 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 STAT2P52630 851 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 SART3Q15020 963 aaKnown RBP10.97□□□□□ -0.65
CHD8-206ENST00000553870 CREB3L3Q68CJ9 461 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 POTEEQ6S8J3 1075 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 TMTC2Q8N394 836 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 PAGR1Q9BTK6 254 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 ARHGAP39Q9C0H5 1083 aa10.97□□□□□ -0.65
CHD8-206ENST00000553870 LAMA4Q16363 1823 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 TMEM232C9JQI7 657 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 ATP2A1O14983 1001 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 ZBED4O75132 1171 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 SLC25A27O95847 323 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 SNHG28P0DPA3 235 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 OAZ1P54368 228 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 CAP1Q01518 475 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 IRF5Q13568 498 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 KRT32Q14532 448 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 BTNL9Q6UXG8 535 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 PPP4R3CPQ6ZMV5 832 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 PLEKHH3Q7Z736 793 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 NBPF11Q86T75 865 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 ENAHQ8N8S7 591 aaPredicted RBP10.96□□□□□ -0.65
CHD8-206ENST00000553870 KCNB2Q92953 911 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 ATG4CQ96DT6 458 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 SPATC1LQ9H0A9 340 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 MROH8Q9H579 483 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 KAT14Q9H8E8 782 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 BTBD7Q9P203 1132 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 PNMA2Q9UL42 364 aa10.96□□□□□ -0.65
CHD8-206ENST00000553870 CTDP1Q9Y5B0 961 aaPredicted RBP10.96□□□□□ -0.65
CHD8-206ENST00000553870 TNKSO95271 1327 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 PDHBP11177 359 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 MCM5P33992 734 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 STAT3P40763 770 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 FLT3LGP49771 235 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 SEC23AQ15436 765 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 GPATCH4Q5T3I0 446 aaKnown RBP10.95□□□□□ -0.66
CHD8-206ENST00000553870 IFIT1BQ5T764 474 aaKnown RBP10.95□□□□□ -0.66
CHD8-206ENST00000553870 STOX1Q6ZVD7 989 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 CYB5R4Q7L1T6 521 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 GPR142Q7Z601 462 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 RIOX2Q8IUF8 465 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 MB21D2Q8IYB1 491 aaPredicted RBP10.95□□□□□ -0.66
CHD8-206ENST00000553870 PNMA1Q8ND90 353 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 NKX2-3Q8TAU0 364 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 RAET1EQ8TD07 263 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 PXYLP1Q8TE99 480 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 SOCS4Q8WXH5 440 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 ABHD8Q96I13 439 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 TMEM87BQ96K49 555 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 NUP88Q99567 741 aaPredicted RBP10.95□□□□□ -0.66
CHD8-206ENST00000553870 NUDT12Q9BQG2 462 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 ZKSCAN3Q9BRR0 538 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 FBXO28Q9NVF7 368 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 GJD2Q9UKL4 321 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 HPS5Q9UPZ3 1129 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 MYH4Q9Y623 1939 aa10.95□□□□□ -0.66
CHD8-206ENST00000553870 SLC15A5A6NIM6 579 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 IFIT3O14879 490 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms