RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 SULF2Q8IWU5 870 aa8.48□□□□□ -1.05
ATXN3-223ENST00000553686 STK35Q8TDR2 534 aa8.48□□□□□ -1.05
ATXN3-223ENST00000553686 KCNB2Q92953 911 aa8.48□□□□□ -1.05
ATXN3-223ENST00000553686 WDR89Q96FK6 387 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-223ENST00000553686 NECAB3Q96P71 396 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-223ENST00000553686 DUSP9Q99956 384 aaKnown RBP8.48□□□□□ -1.05
ATXN3-223ENST00000553686 KRTAP4-6Q9BYQ5 205 aa8.48□□□□□ -1.05
ATXN3-223ENST00000553686 CEP44Q9C0F1 390 aa8.48□□□□□ -1.05
ATXN3-223ENST00000553686 FAM8A1Q9UBU6 413 aa8.48□□□□□ -1.05
ATXN3-223ENST00000553686 LMO7Q8WWI1 1683 aa8.48□□□□□ -1.05
ATXN3-223ENST00000553686 PLEKHG2Q9H7P9 1386 aa8.48□□□□□ -1.05
ATXN3-223ENST00000553686 PCNTO95613 3336 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 LRRC37A3O60309 1634 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 PPIP5K1Q6PFW1 1433 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 FAM95CA0A1B0GW59 222 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 SLFN14P0C7P3 912 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 GNA15P30679 374 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 NFKBIBQ15653 356 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 CCDC27Q2M243 656 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 WDR18Q9BV38 432 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 RNF19AQ9NV58 838 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 RNF112Q9ULX5 631 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 ACTL7BQ9Y614 415 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 PAPPAQ13219 1627 aa8.47□□□□□ -1.05
ATXN3-223ENST00000553686 IFT172Q9UG01 1749 aa8.46□□□□□ -1.05
ATXN3-223ENST00000553686 PPLO60437 1756 aa8.46□□□□□ -1.05
ATXN3-223ENST00000553686 SCO2A0A1W2PP80 73 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 CCDC85CA6NKD9 419 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 ZNF862O60290 1169 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 FBXO24O75426 580 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 USP17L7P0C7H9 530 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 VEGFAP15692 232 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-223ENST00000553686 NME2P22392 152 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 EIF4BP23588 611 aaKnown RBP8.46□□□□□ -1.06
ATXN3-223ENST00000553686 ASPAP45381 313 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 PDZD3Q86UT5 571 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 NPAS4Q8IUM7 802 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 Q8N3U1 123 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 EMILIN2Q9BXX0 1053 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 CBX8Q9HC52 389 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 PPP1R9AQ9ULJ8 1098 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 PPM1HQ9ULR3 514 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 AP4E1Q9UPM8 1137 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 AK5Q9Y6K8 562 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 CRYBG1Q9Y4K1 1723 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.06
ATXN3-223ENST00000553686 RGPD8O14715 1765 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-223ENST00000553686 PAOXQ6QHF9 649 aa8.45□□□□□ -1.06
ATXN3-223ENST00000553686 DBNDD2Q9BQY9 259 aa8.45□□□□□ -1.06
ATXN3-223ENST00000553686 YIPF2Q9BWQ6 316 aa8.45□□□□□ -1.06
ATXN3-223ENST00000553686 KRT82Q9NSB4 513 aa8.45□□□□□ -1.06
ATXN3-223ENST00000553686 TOPAZ1Q8N9V7 1692 aa8.45□□□□□ -1.06
ATXN3-223ENST00000553686 SYNGAP1Q96PV0 1343 aa8.45□□□□□ -1.06
ATXN3-223ENST00000553686 WDR90Q96KV7 1748 aa8.44□□□□□ -1.06
ATXN3-223ENST00000553686 ENC1O14682 589 aa8.44□□□□□ -1.06
ATXN3-223ENST00000553686 NFICP08651 508 aa8.44□□□□□ -1.06
ATXN3-223ENST00000553686 BMP6P22004 513 aa8.44□□□□□ -1.06
ATXN3-223ENST00000553686 MAP1SQ66K74 1059 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-223ENST00000553686 FAM105AQ9NUU6 356 aa8.44□□□□□ -1.06
ATXN3-223ENST00000553686 RNF181Q9P0P0 153 aa8.44□□□□□ -1.06
ATXN3-223ENST00000553686 SAMM50Q9Y512 469 aa8.44□□□□□ -1.06
ATXN3-223ENST00000553686 USP47Q96K76 1375 aa8.44□□□□□ -1.06
ATXN3-223ENST00000553686 CPSF1Q10570 1443 aaKnown RBP8.44□□□□□ -1.06
ATXN3-223ENST00000553686 SBF2Q86WG5 1849 aa8.43□□□□□ -1.06
ATXN3-223ENST00000553686 A0A0G2JLW4 131 aa8.43□□□□□ -1.06
ATXN3-223ENST00000553686 PAGE1O75459 146 aa8.43□□□□□ -1.06
ATXN3-223ENST00000553686 RAB6AP20340 208 aa8.43□□□□□ -1.06
ATXN3-223ENST00000553686 LBX1P52954 281 aa8.43□□□□□ -1.06
ATXN3-223ENST00000553686 HNRNPUQ00839 825 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATXN3-223ENST00000553686 KIF4BQ2VIQ3 1234 aa8.43□□□□□ -1.06
ATXN3-223ENST00000553686 ZDHHC13Q8IUH4 622 aa8.43□□□□□ -1.06
ATXN3-223ENST00000553686 GRIN3AQ8TCU5 1115 aa8.43□□□□□ -1.06
ATXN3-223ENST00000553686 ANKRD24Q8TF21 1146 aa8.43□□□□□ -1.06
ATXN3-223ENST00000553686 EZH1Q92800 747 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-223ENST00000553686 MFSD14AQ96MC6 490 aa8.43□□□□□ -1.06
ATXN3-223ENST00000553686 GSX1Q9H4S2 264 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-223ENST00000553686 PARP2Q9UGN5 583 aa8.43□□□□□ -1.06
ATXN3-223ENST00000553686 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-223ENST00000553686 WDR64B1ANS9 1081 aa8.42□□□□□ -1.06
ATXN3-223ENST00000553686 ID3Q02535 119 aa8.42□□□□□ -1.06
ATXN3-223ENST00000553686 ARTNQ5T4W7 220 aa8.42□□□□□ -1.06
ATXN3-223ENST00000553686 MPRIPQ6WCQ1 1025 aa8.42□□□□□ -1.06
ATXN3-223ENST00000553686 FBXL6Q8N531 539 aa8.42□□□□□ -1.06
ATXN3-223ENST00000553686 SHKBP1Q8TBC3 707 aa8.42□□□□□ -1.06
ATXN3-223ENST00000553686 MPHOSPH9Q99550 1183 aa8.42□□□□□ -1.06
ATXN3-223ENST00000553686 CRIM1Q9NZV1 1036 aa8.42□□□□□ -1.06
ATXN3-223ENST00000553686 TTF2Q9UNY4 1162 aaKnown RBP8.42□□□□□ -1.06
ATXN3-223ENST00000553686 ANKRD36BQ8N2N9 1353 aa8.42□□□□□ -1.06
ATXN3-223ENST00000553686 ARHGEF28Q8N1W1 1705 aaKnown RBP8.41□□□□□ -1.06
ATXN3-223ENST00000553686 TMPRSS2O15393 492 aa8.41□□□□□ -1.06
ATXN3-223ENST00000553686 HYAL3O43820 417 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-223ENST00000553686 ERCC3P19447 782 aa8.41□□□□□ -1.06
ATXN3-223ENST00000553686 ZNF252P-AS1Q0IIN9 211 aa8.41□□□□□ -1.06
ATXN3-223ENST00000553686 MAP7Q14244 749 aa8.41□□□□□ -1.06
ATXN3-223ENST00000553686 ACSS3Q9H6R3 686 aa8.41□□□□□ -1.06
ATXN3-223ENST00000553686 ZFP64Q9NPA5 681 aa8.41□□□□□ -1.06
ATXN3-223ENST00000553686 GLTPD2A6NH11 291 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 TGFB1P01137 390 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 SSTR4P31391 388 aa8.4□□□□□ -1.06
ATXN3-223ENST00000553686 PSMD2Q13200 908 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms