RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 MAP3K21Q5TCX8 1036 aa21.73■■□□□ 1.07
SHMT2-206ENST00000553529 LPAR1Q92633 364 aa21.73■■□□□ 1.07
SHMT2-206ENST00000553529 APBA2Q99767 749 aa21.73■■□□□ 1.07
SHMT2-206ENST00000553529 FRMPD3Q5JV73 1810 aa21.72■■□□□ 1.07
SHMT2-206ENST00000553529 COBLO75128 1261 aa21.72■■□□□ 1.07
SHMT2-206ENST00000553529 RGS2P41220 211 aa21.72■■□□□ 1.07
SHMT2-206ENST00000553529 GRB14Q14449 540 aa21.72■■□□□ 1.07
SHMT2-206ENST00000553529 TRPV1Q8NER1 839 aa21.72■■□□□ 1.07
SHMT2-206ENST00000553529 REPS2Q8NFH8 660 aa21.72■■□□□ 1.07
SHMT2-206ENST00000553529 NBPF3Q9H094 633 aa21.72■■□□□ 1.07
SHMT2-206ENST00000553529 CRISPLD2Q9H0B8 497 aa21.72■■□□□ 1.07
SHMT2-206ENST00000553529 IL25Q9H293 177 aa21.72■■□□□ 1.07
SHMT2-206ENST00000553529 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.72■■□□□ 1.07
SHMT2-206ENST00000553529 F5H6K3 240 aa21.71■■□□□ 1.07
SHMT2-206ENST00000553529 H0YGN5 161 aa21.71■■□□□ 1.07
SHMT2-206ENST00000553529 CYP2C19P33261 490 aa21.71■■□□□ 1.07
SHMT2-206ENST00000553529 HAND2P61296 217 aa21.71■■□□□ 1.07
SHMT2-206ENST00000553529 TFAP4Q01664 338 aa21.71■■□□□ 1.07
SHMT2-206ENST00000553529 KLRC3Q07444 240 aa21.71■■□□□ 1.07
SHMT2-206ENST00000553529 NCAPG2Q86XI2 1143 aa21.71■■□□□ 1.07
SHMT2-206ENST00000553529 ZNF444Q8N0Y2 327 aaPredicted RBP21.71■■□□□ 1.07
SHMT2-206ENST00000553529 NACAP1Q9BZK3 213 aa21.71■■□□□ 1.07
SHMT2-206ENST00000553529 NYAP2Q9P242 653 aa21.71■■□□□ 1.07
SHMT2-206ENST00000553529 RPTORQ8N122 1335 aa21.71■■□□□ 1.07
SHMT2-206ENST00000553529 TAL1P17542 331 aaPredicted RBP21.7■■□□□ 1.06
SHMT2-206ENST00000553529 ADORA2AP29274 412 aa21.7■■□□□ 1.06
SHMT2-206ENST00000553529 CCNA1P78396 465 aa21.7■■□□□ 1.06
SHMT2-206ENST00000553529 LRRFIP1Q32MZ4 808 aaKnown RBP21.7■■□□□ 1.06
SHMT2-206ENST00000553529 PAWRQ96IZ0 340 aaKnown RBP21.7■■□□□ 1.06
SHMT2-206ENST00000553529 SH2D4AQ9H788 454 aa21.7■■□□□ 1.06
SHMT2-206ENST00000553529 GOPCQ9HD26 462 aa21.7■■□□□ 1.06
SHMT2-206ENST00000553529 HMX1Q9NP08 348 aaPredicted RBP21.7■■□□□ 1.06
SHMT2-206ENST00000553529 IL17RBQ9NRM6 502 aa21.7■■□□□ 1.06
SHMT2-206ENST00000553529 MTMR4Q9NYA4 1195 aa21.7■■□□□ 1.06
SHMT2-206ENST00000553529 HOXC10Q9NYD6 342 aa21.7■■□□□ 1.06
SHMT2-206ENST00000553529 PPP1R9AQ9ULJ8 1098 aa21.7■■□□□ 1.06
SHMT2-206ENST00000553529 ZNF236Q9UL36 1845 aa21.7■■□□□ 1.06
SHMT2-206ENST00000553529 SLC15A5A6NIM6 579 aa21.69■■□□□ 1.06
SHMT2-206ENST00000553529 TSPY3P0CV98 308 aa21.69■■□□□ 1.06
SHMT2-206ENST00000553529 TSPY8P0CW00 308 aa21.69■■□□□ 1.06
SHMT2-206ENST00000553529 XRCC5P13010 732 aaKnown RBP21.69■■□□□ 1.06
SHMT2-206ENST00000553529 SDSP20132 328 aa21.69■■□□□ 1.06
SHMT2-206ENST00000553529 NEDD1Q8NHV4 660 aa21.69■■□□□ 1.06
SHMT2-206ENST00000553529 HELLSQ9NRZ9 838 aa21.69■■□□□ 1.06
SHMT2-206ENST00000553529 ADAMTS5Q9UNA0 930 aa21.69■■□□□ 1.06
SHMT2-206ENST00000553529 RIPK3Q9Y572 518 aa21.69■■□□□ 1.06
SHMT2-206ENST00000553529 PLIN4Q96Q06 1357 aa21.69■■□□□ 1.06
SHMT2-206ENST00000553529 VWA5AO00534 786 aa21.68■■□□□ 1.06
SHMT2-206ENST00000553529 FGAP02671 866 aa21.68■■□□□ 1.06
SHMT2-206ENST00000553529 PGK2P07205 417 aa21.68■■□□□ 1.06
SHMT2-206ENST00000553529 HSPD1P10809 573 aaKnown RBP21.68■■□□□ 1.06
SHMT2-206ENST00000553529 MCMDC2Q4G0Z9 681 aa21.68■■□□□ 1.06
SHMT2-206ENST00000553529 ANO1Q5XXA6 986 aa21.68■■□□□ 1.06
SHMT2-206ENST00000553529 SKAP1Q86WV1 359 aa21.68■■□□□ 1.06
SHMT2-206ENST00000553529 DPF3Q92784 378 aa21.68■■□□□ 1.06
SHMT2-206ENST00000553529 ZNF214Q9UL59 606 aaPredicted RBP21.68■■□□□ 1.06
SHMT2-206ENST00000553529 MTMR7Q9Y216 660 aa21.68■■□□□ 1.06
SHMT2-206ENST00000553529 GSPT1P15170 499 aaKnown RBP21.67■■□□□ 1.06
SHMT2-206ENST00000553529 SLC4A3P48751 1232 aa21.67■■□□□ 1.06
SHMT2-206ENST00000553529 SNAP25P60880 206 aa21.67■■□□□ 1.06
SHMT2-206ENST00000553529 AAMPQ13685 434 aa21.67■■□□□ 1.06
SHMT2-206ENST00000553529 PRAMEF19Q5SWL8 479 aa21.67■■□□□ 1.06
SHMT2-206ENST00000553529 TBC1D10CQ8IV04 446 aa21.67■■□□□ 1.06
SHMT2-206ENST00000553529 OSBPL3Q9H4L5 887 aa21.67■■□□□ 1.06
SHMT2-206ENST00000553529 IVNS1ABPQ9Y6Y0 642 aa21.67■■□□□ 1.06
SHMT2-206ENST00000553529 CCDC171Q6TFL3 1326 aa21.66■■□□□ 1.06
SHMT2-206ENST00000553529 IGHA2P01877 340 aa21.66■■□□□ 1.06
SHMT2-206ENST00000553529 PDE4BQ07343 736 aa21.66■■□□□ 1.06
SHMT2-206ENST00000553529 RRP12Q5JTH9 1297 aaKnown RBP21.66■■□□□ 1.06
SHMT2-206ENST00000553529 LHX8Q68G74 356 aa21.66■■□□□ 1.06
SHMT2-206ENST00000553529 CWC27Q6UX04 472 aaKnown RBP21.66■■□□□ 1.06
SHMT2-206ENST00000553529 ZNFX1Q9P2E3 1918 aaKnown RBP21.66■■□□□ 1.06
SHMT2-206ENST00000553529 TTLL1O95922 423 aa21.65■■□□□ 1.06
SHMT2-206ENST00000553529 KIFC2Q96AC6 838 aa21.65■■□□□ 1.06
SHMT2-206ENST00000553529 SLF1Q9BQI6 1058 aa21.65■■□□□ 1.06
SHMT2-206ENST00000553529 RAVER2Q9HCJ3 691 aaKnown RBP21.65■■□□□ 1.06
SHMT2-206ENST00000553529 RANBP6O60518 1105 aaKnown RBP21.64■■□□□ 1.05
SHMT2-206ENST00000553529 HOXC6P09630 235 aa21.64■■□□□ 1.05
SHMT2-206ENST00000553529 SLFN13Q68D06 897 aa21.64■■□□□ 1.05
SHMT2-206ENST00000553529 DPP9Q86TI2 863 aa21.64■■□□□ 1.05
SHMT2-206ENST00000553529 CPXCR1Q8N123 301 aa21.64■■□□□ 1.05
SHMT2-206ENST00000553529 SHCBP1Q8NEM2 672 aa21.64■■□□□ 1.05
SHMT2-206ENST00000553529 MKL1Q969V6 931 aa21.64■■□□□ 1.05
SHMT2-206ENST00000553529 ANAPC4Q9UJX5 808 aa21.64■■□□□ 1.05
SHMT2-206ENST00000553529 OGDHLQ9ULD0 1010 aa21.64■■□□□ 1.05
SHMT2-206ENST00000553529 ISY1Q9ULR0 285 aaKnown RBP21.64■■□□□ 1.05
SHMT2-206ENST00000553529 COLQQ9Y215 455 aaPredicted RBP21.64■■□□□ 1.05
SHMT2-206ENST00000553529 PFASO15067 1338 aa21.63■■□□□ 1.05
SHMT2-206ENST00000553529 NEDD4P46934 1319 aa21.63■■□□□ 1.05
SHMT2-206ENST00000553529 PLXNA1Q9UIW2 1896 aa21.63■■□□□ 1.05
SHMT2-206ENST00000553529 TSPY2A6NKD2 308 aa21.63■■□□□ 1.05
SHMT2-206ENST00000553529 KCTD1Q719H9 257 aa21.63■■□□□ 1.05
SHMT2-206ENST00000553529 RIOX2Q8IUF8 465 aa21.63■■□□□ 1.05
SHMT2-206ENST00000553529 MB21D1Q8N884 522 aa21.63■■□□□ 1.05
SHMT2-206ENST00000553529 TOMM22Q9NS69 142 aa21.63■■□□□ 1.05
SHMT2-206ENST00000553529 STX8Q9UNK0 236 aa21.63■■□□□ 1.05
SHMT2-206ENST00000553529 CYBAP13498 195 aa21.62■■□□□ 1.05
SHMT2-206ENST00000553529 MCCP23508 829 aa21.62■■□□□ 1.05
SHMT2-206ENST00000553529 CNGA1P29973 690 aa21.62■■□□□ 1.05
SHMT2-206ENST00000553529 STAT3P40763 770 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms