RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 F5H6K3 240 aa20.32■□□□□ 0.84
PSEN1-206ENST00000553447 CTNND1O60716 968 aaKnown RBP20.32■□□□□ 0.84
PSEN1-206ENST00000553447 MMP1P03956 469 aa20.32■□□□□ 0.84
PSEN1-206ENST00000553447 KLRC3Q07444 240 aa20.32■□□□□ 0.84
PSEN1-206ENST00000553447 SUPT20HL1Q3ZLR7 823 aa20.32■□□□□ 0.84
PSEN1-206ENST00000553447 PIBF1Q8WXW3 757 aa20.32■□□□□ 0.84
PSEN1-206ENST00000553447 SHISA4Q96DD7 197 aa20.32■□□□□ 0.84
PSEN1-206ENST00000553447 CPVLQ9H3G5 476 aa20.32■□□□□ 0.84
PSEN1-206ENST00000553447 RIOX1Q9H6W3 641 aa20.32■□□□□ 0.84
PSEN1-206ENST00000553447 VPS54Q9P1Q0 977 aa20.32■□□□□ 0.84
PSEN1-206ENST00000553447 ZNF112Q9UJU3 913 aa20.32■□□□□ 0.84
PSEN1-206ENST00000553447 TMX2Q9Y320 296 aa20.32■□□□□ 0.84
PSEN1-206ENST00000553447 PAPPA2Q9BXP8 1791 aa20.31■□□□□ 0.84
PSEN1-206ENST00000553447 NDUFB10O96000 172 aa20.31■□□□□ 0.84
PSEN1-206ENST00000553447 NCLP19338 710 aaKnown RBP20.31■□□□□ 0.84
PSEN1-206ENST00000553447 SLC1A4P43007 532 aa20.31■□□□□ 0.84
PSEN1-206ENST00000553447 KRT85P78386 507 aa20.31■□□□□ 0.84
PSEN1-206ENST00000553447 BRAPQ7Z569 592 aa20.31■□□□□ 0.84
PSEN1-206ENST00000553447 SULF1Q8IWU6 871 aa20.31■□□□□ 0.84
PSEN1-206ENST00000553447 ACER1Q8TDN7 264 aa20.31■□□□□ 0.84
PSEN1-206ENST00000553447 ZC3H15Q8WU90 426 aaKnown RBP20.31■□□□□ 0.84
PSEN1-206ENST00000553447 GMCL1Q96IK5 515 aa20.31■□□□□ 0.84
PSEN1-206ENST00000553447 UBA5Q9GZZ9 404 aa20.31■□□□□ 0.84
PSEN1-206ENST00000553447 TAF1DQ9H5J8 278 aaPredicted RBP20.31■□□□□ 0.84
PSEN1-206ENST00000553447 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.31■□□□□ 0.84
PSEN1-206ENST00000553447 KCNJ14Q9UNX9 436 aa20.31■□□□□ 0.84
PSEN1-206ENST00000553447 PHIPQ8WWQ0 1821 aa20.31■□□□□ 0.84
PSEN1-206ENST00000553447 KIF28PB7ZC32 967 aa20.3■□□□□ 0.84
PSEN1-206ENST00000553447 ADM5C9JUS6 153 aa20.3■□□□□ 0.84
PSEN1-206ENST00000553447 RAD21O60216 631 aa20.3■□□□□ 0.84
PSEN1-206ENST00000553447 INPP5BP32019 993 aa20.3■□□□□ 0.84
PSEN1-206ENST00000553447 ECE1P42892 770 aa20.3■□□□□ 0.84
PSEN1-206ENST00000553447 SAFBQ15424 915 aaKnown RBP eCLIP20.3■□□□□ 0.84
PSEN1-206ENST00000553447 TTBK2Q6IQ55 1244 aa20.3■□□□□ 0.84
PSEN1-206ENST00000553447 KCTD1Q719H9 257 aa20.3■□□□□ 0.84
PSEN1-206ENST00000553447 TMEM87AQ8NBN3 555 aa20.3■□□□□ 0.84
PSEN1-206ENST00000553447 RRP36Q96EU6 259 aaKnown RBP20.3■□□□□ 0.84
PSEN1-206ENST00000553447 PHF20Q9BVI0 1012 aa20.3■□□□□ 0.84
PSEN1-206ENST00000553447 SH2D4AQ9H788 454 aa20.3■□□□□ 0.84
PSEN1-206ENST00000553447 LMBRD1Q9NUN5 540 aa20.3■□□□□ 0.84
PSEN1-206ENST00000553447 OTOFQ9HC10 1997 aa20.3■□□□□ 0.84
PSEN1-206ENST00000553447 POTECB2RU33 542 aa20.29■□□□□ 0.84
PSEN1-206ENST00000553447 PRPF40AO75400 957 aaKnown RBP20.29■□□□□ 0.84
PSEN1-206ENST00000553447 USP48Q86UV5 1035 aa20.29■□□□□ 0.84
PSEN1-206ENST00000553447 GDPD2Q9HCC8 539 aa20.29■□□□□ 0.84
PSEN1-206ENST00000553447 GOPCQ9HD26 462 aa20.29■□□□□ 0.84
PSEN1-206ENST00000553447 SH3GLB2Q9NR46 395 aa20.29■□□□□ 0.84
PSEN1-206ENST00000553447 FIBPO43427 364 aa20.28■□□□□ 0.84
PSEN1-206ENST00000553447 BMP3P12645 472 aa20.28■□□□□ 0.84
PSEN1-206ENST00000553447 VEGFAP15692 232 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-206ENST00000553447 U2AF2P26368 475 aaKnown RBP eCLIP20.28■□□□□ 0.84
PSEN1-206ENST00000553447 GNL2Q13823 731 aaKnown RBP20.28■□□□□ 0.84
PSEN1-206ENST00000553447 ATL3Q6DD88 541 aa20.28■□□□□ 0.84
PSEN1-206ENST00000553447 DIS3L2Q8IYB7 885 aaKnown RBP20.28■□□□□ 0.84
PSEN1-206ENST00000553447 SCYL3Q8IZE3 742 aa20.28■□□□□ 0.84
PSEN1-206ENST00000553447 ZNF396Q96N95 335 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-206ENST00000553447 PIGSQ96S52 555 aa20.28■□□□□ 0.84
PSEN1-206ENST00000553447 WRNIP1Q96S55 665 aa20.28■□□□□ 0.84
PSEN1-206ENST00000553447 FOXP1Q9H334 677 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-206ENST00000553447 VAT1LQ9HCJ6 419 aa20.28■□□□□ 0.84
PSEN1-206ENST00000553447 SEC63Q9UGP8 760 aaKnown RBP20.28■□□□□ 0.84
PSEN1-206ENST00000553447 ISY1Q9ULR0 285 aaKnown RBP20.28■□□□□ 0.84
PSEN1-206ENST00000553447 CSPP1Q1MSJ5 1256 aa20.27■□□□□ 0.84
PSEN1-206ENST00000553447 WWC2Q6AWC2 1192 aa20.27■□□□□ 0.84
PSEN1-206ENST00000553447 KRT26Q7Z3Y9 468 aa20.27■□□□□ 0.84
PSEN1-206ENST00000553447 CCDC84Q86UT8 332 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-206ENST00000553447 PNMA8AQ86V59 439 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-206ENST00000553447 HOMER1Q86YM7 354 aa20.27■□□□□ 0.84
PSEN1-206ENST00000553447 ADGRF4Q8IZF3 695 aa20.27■□□□□ 0.84
PSEN1-206ENST00000553447 FAM177A1Q8N128 213 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-206ENST00000553447 GPKOWQ92917 476 aaPredicted RBP eCLIP20.27■□□□□ 0.84
PSEN1-206ENST00000553447 KLRG1Q96E93 195 aa20.27■□□□□ 0.84
PSEN1-206ENST00000553447 GLIS2Q9BZE0 524 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-206ENST00000553447 VCPKMTQ9H867 229 aa20.27■□□□□ 0.84
PSEN1-206ENST00000553447 JMJD4Q9H9V9 463 aa20.27■□□□□ 0.84
PSEN1-206ENST00000553447 TFIP11Q9UBB9 837 aaKnown RBP20.27■□□□□ 0.84
PSEN1-206ENST00000553447 BTBD18B2RXH4 712 aa20.26■□□□□ 0.83
PSEN1-206ENST00000553447 STXBP3O00186 592 aa20.26■□□□□ 0.83
PSEN1-206ENST00000553447 KRT2P35908 639 aa20.26■□□□□ 0.83
PSEN1-206ENST00000553447 SLC16A2P36021 539 aa20.26■□□□□ 0.83
PSEN1-206ENST00000553447 EAPPQ56P03 285 aaPredicted RBP20.26■□□□□ 0.83
PSEN1-206ENST00000553447 KIAA1755Q5JYT7 1200 aa20.26■□□□□ 0.83
PSEN1-206ENST00000553447 MYSM1Q5VVJ2 828 aa20.26■□□□□ 0.83
PSEN1-206ENST00000553447 HEATR3Q7Z4Q2 680 aa20.26■□□□□ 0.83
PSEN1-206ENST00000553447 NUP88Q99567 741 aaPredicted RBP20.26■□□□□ 0.83
PSEN1-206ENST00000553447 BARHL2Q9NY43 387 aa20.26■□□□□ 0.83
PSEN1-206ENST00000553447 CFAP45Q9UL16 551 aa20.26■□□□□ 0.83
PSEN1-206ENST00000553447 FZD1Q9UP38 647 aa20.26■□□□□ 0.83
PSEN1-206ENST00000553447 hCG_1984214I3L0E3 225 aa20.25■□□□□ 0.83
PSEN1-206ENST00000553447 NLRP5P59047 1200 aa20.25■□□□□ 0.83
PSEN1-206ENST00000553447 NPY5RQ15761 445 aa20.25■□□□□ 0.83
PSEN1-206ENST00000553447 NOL9Q5SY16 702 aaKnown RBP20.25■□□□□ 0.83
PSEN1-206ENST00000553447 DLK2Q6UY11 383 aa20.25■□□□□ 0.83
PSEN1-206ENST00000553447 NOSTRINQ8IVI9 506 aa20.25■□□□□ 0.83
PSEN1-206ENST00000553447 SPICE1Q8N0Z3 855 aa20.25■□□□□ 0.83
PSEN1-206ENST00000553447 ZNF713Q8N859 430 aaPredicted RBP20.25■□□□□ 0.83
PSEN1-206ENST00000553447 CCDC148Q8NFR7 591 aa20.25■□□□□ 0.83
PSEN1-206ENST00000553447 OXER1Q8TDS5 423 aa20.25■□□□□ 0.83
PSEN1-206ENST00000553447 MTMR8Q96EF0 704 aa20.25■□□□□ 0.83
PSEN1-206ENST00000553447 FEZ1Q99689 392 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms