RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 UNCXA6NJT0 531 aa7.95□□□□□ -1.14
ATXN3-218ENST00000553309 RGS13O14921 159 aa7.95□□□□□ -1.14
ATXN3-218ENST00000553309 PAX4O43316 350 aa7.95□□□□□ -1.14
ATXN3-218ENST00000553309 RAG1P15918 1043 aa7.95□□□□□ -1.14
ATXN3-218ENST00000553309 KREMEN1Q96MU8 473 aa7.95□□□□□ -1.14
ATXN3-218ENST00000553309 DUSP15Q9H1R2 295 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-218ENST00000553309 CARS2Q9HA77 564 aaKnown RBP7.95□□□□□ -1.14
ATXN3-218ENST00000553309 KIAA1522Q9P206 1035 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-218ENST00000553309 DDX41Q9UJV9 622 aaKnown RBP7.95□□□□□ -1.14
ATXN3-218ENST00000553309 LTBP4Q8N2S1 1624 aa7.95□□□□□ -1.14
ATXN3-218ENST00000553309 WASH4PA8MWX3 477 aa7.94□□□□□ -1.14
ATXN3-218ENST00000553309 LRRN4CLQ8ND94 238 aa7.94□□□□□ -1.14
ATXN3-218ENST00000553309 RNF141Q8WVD5 230 aa7.94□□□□□ -1.14
ATXN3-218ENST00000553309 ATG4CQ96DT6 458 aa7.94□□□□□ -1.14
ATXN3-218ENST00000553309 ANTXR1Q9H6X2 564 aa7.94□□□□□ -1.14
ATXN3-218ENST00000553309 BIVM-ERCC5R4GMW8 1640 aa7.93□□□□□ -1.14
ATXN3-218ENST00000553309 BIN1O00499 593 aa7.93□□□□□ -1.14
ATXN3-218ENST00000553309 JUNBP17275 347 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-218ENST00000553309 ITGB5P18084 799 aa7.93□□□□□ -1.14
ATXN3-218ENST00000553309 LRRFIP1Q32MZ4 808 aaKnown RBP7.93□□□□□ -1.14
ATXN3-218ENST00000553309 CDCP2Q5VXM1 449 aa7.93□□□□□ -1.14
ATXN3-218ENST00000553309 C9orf131Q5VYM1 1079 aa7.93□□□□□ -1.14
ATXN3-218ENST00000553309 METTL16Q86W50 562 aaKnown RBP7.93□□□□□ -1.14
ATXN3-218ENST00000553309 ZNF654Q8IZM8 581 aa7.93□□□□□ -1.14
ATXN3-218ENST00000553309 DTWD2Q8NBA8 298 aa7.93□□□□□ -1.14
ATXN3-218ENST00000553309 CNNM2Q9H8M5 875 aa7.93□□□□□ -1.14
ATXN3-218ENST00000553309 GPATCH2Q9NW75 528 aa7.93□□□□□ -1.14
ATXN3-218ENST00000553309 UBOX5O94941 541 aa7.92□□□□□ -1.14
ATXN3-218ENST00000553309 OVOS1Q6IE37 1185 aa7.92□□□□□ -1.14
ATXN3-218ENST00000553309 ATG4DQ86TL0 474 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-218ENST00000553309 ASIC4Q96FT7 647 aa7.92□□□□□ -1.14
ATXN3-218ENST00000553309 TRIT1Q9H3H1 467 aaKnown RBP7.92□□□□□ -1.14
ATXN3-218ENST00000553309 FRMPD1Q5SYB0 1578 aa7.92□□□□□ -1.14
ATXN3-218ENST00000553309 TPP2P29144 1249 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-218ENST00000553309 HSPA1LP34931 641 aa7.91□□□□□ -1.14
ATXN3-218ENST00000553309 TMPRSS7Q7RTY8 843 aa7.91□□□□□ -1.14
ATXN3-218ENST00000553309 CREG2Q8IUH2 290 aa7.91□□□□□ -1.14
ATXN3-218ENST00000553309 VWCEQ96DN2 955 aa7.91□□□□□ -1.14
ATXN3-218ENST00000553309 ASPNQ9BXN1 380 aa7.91□□□□□ -1.14
ATXN3-218ENST00000553309 KRTAP4-8Q9BYQ9 185 aa7.91□□□□□ -1.14
ATXN3-218ENST00000553309 GPR62Q9BZJ7 368 aa7.91□□□□□ -1.14
ATXN3-218ENST00000553309 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.91□□□□□ -1.14
ATXN3-218ENST00000553309 RNF114Q9Y508 228 aa7.91□□□□□ -1.14
ATXN3-218ENST00000553309 DISP1Q96F81 1524 aa7.91□□□□□ -1.14
ATXN3-218ENST00000553309 PREX1Q8TCU6 1659 aa7.9□□□□□ -1.14
ATXN3-218ENST00000553309 ARHGEF40Q8TER5 1519 aa7.9□□□□□ -1.14
ATXN3-218ENST00000553309 IQSEC2Q5JU85 1478 aa7.9□□□□□ -1.14
ATXN3-218ENST00000553309 ESR1P03372 595 aa7.9□□□□□ -1.14
ATXN3-218ENST00000553309 SRFP11831 508 aa7.9□□□□□ -1.14
ATXN3-218ENST00000553309 POLR2BP30876 1174 aaKnown RBP7.9□□□□□ -1.14
ATXN3-218ENST00000553309 CEBPAP49715 358 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-218ENST00000553309 HDLBPQ00341 1268 aaKnown RBP7.9□□□□□ -1.14
ATXN3-218ENST00000553309 NLRC3Q7RTR2 1065 aa7.9□□□□□ -1.14
ATXN3-218ENST00000553309 NT5DC4Q86YG4 428 aa7.9□□□□□ -1.14
ATXN3-218ENST00000553309 TMEM40Q8WWA1 233 aa7.9□□□□□ -1.14
ATXN3-218ENST00000553309 PAPLNO95428 1278 aa7.89□□□□□ -1.15
ATXN3-218ENST00000553309 NME1P15531 152 aaKnown RBP7.89□□□□□ -1.15
ATXN3-218ENST00000553309 TSPYL5Q86VY4 417 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-218ENST00000553309 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-218ENST00000553309 SIGLEC1Q9BZZ2 1709 aa7.89□□□□□ -1.15
ATXN3-218ENST00000553309 IQGAP2Q13576 1575 aa7.88□□□□□ -1.15
ATXN3-218ENST00000553309 PTPRTO14522 1441 aa7.88□□□□□ -1.15
ATXN3-218ENST00000553309 RAD51AP2Q09MP3 1159 aa7.88□□□□□ -1.15
ATXN3-218ENST00000553309 PAK2Q13177 524 aa7.88□□□□□ -1.15
ATXN3-218ENST00000553309 GAB4Q2WGN9 574 aa7.88□□□□□ -1.15
ATXN3-218ENST00000553309 NBPF12Q5TAG4 269 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-218ENST00000553309 FBXW10Q5XX13 1052 aa7.88□□□□□ -1.15
ATXN3-218ENST00000553309 FERD3LQ96RJ6 166 aa7.88□□□□□ -1.15
ATXN3-218ENST00000553309 CTNND2Q9UQB3 1225 aa7.88□□□□□ -1.15
ATXN3-218ENST00000553309 FER1L4A9Z1Z3 1794 aa7.88□□□□□ -1.15
ATXN3-218ENST00000553309 TTC37Q6PGP7 1564 aa7.88□□□□□ -1.15
ATXN3-218ENST00000553309 MEIS3P2A8K0S8 358 aa7.87□□□□□ -1.15
ATXN3-218ENST00000553309 IMPDH2P12268 514 aa7.87□□□□□ -1.15
ATXN3-218ENST00000553309 CCNFP41002 786 aa7.87□□□□□ -1.15
ATXN3-218ENST00000553309 RNF4P78317 190 aa7.87□□□□□ -1.15
ATXN3-218ENST00000553309 CLEC16AQ2KHT3 1053 aa7.87□□□□□ -1.15
ATXN3-218ENST00000553309 FMNL2Q96PY5 1086 aa7.87□□□□□ -1.15
ATXN3-218ENST00000553309 ALPK1Q96QP1 1244 aa7.87□□□□□ -1.15
ATXN3-218ENST00000553309 SLC9A7Q96T83 725 aa7.87□□□□□ -1.15
ATXN3-218ENST00000553309 ASCC2Q9H1I8 757 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-218ENST00000553309 SLAMF8Q9P0V8 285 aa7.87□□□□□ -1.15
ATXN3-218ENST00000553309 DUSP13Q9UII6 198 aa7.87□□□□□ -1.15
ATXN3-218ENST00000553309 ZNRF3Q9ULT6 936 aa7.87□□□□□ -1.15
ATXN3-218ENST00000553309 FANCAO15360 1455 aa7.87□□□□□ -1.15
ATXN3-218ENST00000553309 POGZQ7Z3K3 1410 aa7.86□□□□□ -1.15
ATXN3-218ENST00000553309 CLEC3AO75596 197 aa7.86□□□□□ -1.15
ATXN3-218ENST00000553309 TXKP42681 527 aa7.86□□□□□ -1.15
ATXN3-218ENST00000553309 AFMP43652 599 aa7.86□□□□□ -1.15
ATXN3-218ENST00000553309 INTS3Q68E01 1043 aaKnown RBP7.86□□□□□ -1.15
ATXN3-218ENST00000553309 FLAD1Q8NFF5 587 aa7.86□□□□□ -1.15
ATXN3-218ENST00000553309 PPT2Q9UMR5 302 aa7.86□□□□□ -1.15
ATXN3-218ENST00000553309 UHRF1BP1Q6BDS2 1440 aa7.86□□□□□ -1.15
ATXN3-218ENST00000553309 ZNF335Q9H4Z2 1342 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-218ENST00000553309 SHISA3A0PJX4 238 aa7.85□□□□□ -1.15
ATXN3-218ENST00000553309 TNFRSF10CO14798 259 aa7.85□□□□□ -1.15
ATXN3-218ENST00000553309 GDNFP39905 211 aa7.85□□□□□ -1.15
ATXN3-218ENST00000553309 EGR3Q06889 387 aa7.85□□□□□ -1.15
ATXN3-218ENST00000553309 NBPF9Q3BBW0 867 aa7.85□□□□□ -1.15
ATXN3-218ENST00000553309 TTC6Q86TZ1 520 aa7.85□□□□□ -1.15
ATXN3-218ENST00000553309 TMEM192Q8IY95 271 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms