RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 KCT2Q8NC54 265 aa7.16□□□□□ -1.26
SCFD1-209ENST00000553280 CCDC74BQ96LY2 380 aa7.16□□□□□ -1.26
SCFD1-209ENST00000553280 KIF2CQ99661 725 aa7.16□□□□□ -1.26
SCFD1-209ENST00000553280 METTL22Q9BUU2 404 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-209ENST00000553280 ATXN3LQ9H3M9 355 aa7.16□□□□□ -1.26
SCFD1-209ENST00000553280 GSX1Q9H4S2 264 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-209ENST00000553280 CCDC163A0A0D9SF12 145 aa7.15□□□□□ -1.26
SCFD1-209ENST00000553280 CYP26A1O43174 497 aa7.15□□□□□ -1.26
SCFD1-209ENST00000553280 RAB11FIP3O75154 756 aa7.15□□□□□ -1.26
SCFD1-209ENST00000553280 UBOX5O94941 541 aa7.15□□□□□ -1.26
SCFD1-209ENST00000553280 SLBPQ14493 270 aaKnown RBP eCLIP7.15□□□□□ -1.26
SCFD1-209ENST00000553280 NKG7Q16617 165 aa7.15□□□□□ -1.26
SCFD1-209ENST00000553280 DALRD3Q5D0E6 543 aaKnown RBP7.15□□□□□ -1.26
SCFD1-209ENST00000553280 ZNF765Q7L2R6 523 aa7.15□□□□□ -1.26
SCFD1-209ENST00000553280 SLC6A18Q96N87 628 aa7.15□□□□□ -1.26
SCFD1-209ENST00000553280 PIDD1Q9HB75 910 aa7.15□□□□□ -1.26
SCFD1-209ENST00000553280 CWC22Q9HCG8 908 aaKnown RBP7.15□□□□□ -1.26
SCFD1-209ENST00000553280 LRRC4CQ9HCJ2 640 aa7.15□□□□□ -1.26
SCFD1-209ENST00000553280 C1GALT1Q9NS00 363 aa7.15□□□□□ -1.26
SCFD1-209ENST00000553280 SUCOQ9UBS9 1254 aaKnown RBP7.15□□□□□ -1.26
SCFD1-209ENST00000553280 KRTAP9-6A0A140TA67 174 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 NEFMP07197 916 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 VIL1P09327 827 aaKnown RBP7.14□□□□□ -1.27
SCFD1-209ENST00000553280 NAT2P11245 290 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 GBP1P32455 592 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 AMPD3Q01432 767 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 TTLL4Q14679 1199 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 MSMPQ1L6U9 139 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 DUSP27Q5VZP5 1158 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 SEZ6L2Q6UXD5 910 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 APBA2Q99767 749 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.14□□□□□ -1.27
SCFD1-209ENST00000553280 SUSD2Q9UGT4 822 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 PLAAQ9Y263 795 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 CD2APQ9Y5K6 639 aa7.14□□□□□ -1.27
SCFD1-209ENST00000553280 ANKRD34BA5PLL1 514 aa7.13□□□□□ -1.27
SCFD1-209ENST00000553280 AGRPO00253 132 aa7.13□□□□□ -1.27
SCFD1-209ENST00000553280 RNGTTO60942 597 aaKnown RBP7.13□□□□□ -1.27
SCFD1-209ENST00000553280 CST3P01034 146 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-209ENST00000553280 HCLS1P14317 486 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-209ENST00000553280 IRAK1P51617 712 aa7.13□□□□□ -1.27
SCFD1-209ENST00000553280 CPSF6Q16630 551 aaKnown RBP eCLIP7.13□□□□□ -1.27
SCFD1-209ENST00000553280 MCTP1Q6DN14 999 aa7.13□□□□□ -1.27
SCFD1-209ENST00000553280 CYB5D2Q8WUJ1 264 aa7.13□□□□□ -1.27
SCFD1-209ENST00000553280 SMARCC1Q92922 1105 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-209ENST00000553280 ANGEL1Q9UNK9 670 aaKnown RBP7.13□□□□□ -1.27
SCFD1-209ENST00000553280 A0A1W2PQU0 124 aa7.12□□□□□ -1.27
SCFD1-209ENST00000553280 CLEC3AO75596 197 aa7.12□□□□□ -1.27
SCFD1-209ENST00000553280 TP53P04637 393 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-209ENST00000553280 CDK5R2Q13319 367 aa7.12□□□□□ -1.27
SCFD1-209ENST00000553280 SV2CQ496J9 727 aa7.12□□□□□ -1.27
SCFD1-209ENST00000553280 PPFIBP1Q86W92 1011 aa7.12□□□□□ -1.27
SCFD1-209ENST00000553280 BAHD1Q8TBE0 780 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-209ENST00000553280 ISL2Q96A47 359 aa7.12□□□□□ -1.27
SCFD1-209ENST00000553280 RFPL3O75679 317 aa7.11□□□□□ -1.27
SCFD1-209ENST00000553280 CYP27A1Q02318 531 aa7.11□□□□□ -1.27
SCFD1-209ENST00000553280 ANKRD39Q53RE8 183 aa7.11□□□□□ -1.27
SCFD1-209ENST00000553280 PRAMEF13Q5VWM6 474 aa7.11□□□□□ -1.27
SCFD1-209ENST00000553280 KRT26Q7Z3Y9 468 aa7.11□□□□□ -1.27
SCFD1-209ENST00000553280 UBE3DQ7Z6J8 389 aa7.11□□□□□ -1.27
SCFD1-209ENST00000553280 SMYD4Q8IYR2 804 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-209ENST00000553280 RPUSD2Q8IZ73 545 aaKnown RBP7.11□□□□□ -1.27
SCFD1-209ENST00000553280 NINJ1Q92982 152 aa7.11□□□□□ -1.27
SCFD1-209ENST00000553280 KISS1RQ969F8 398 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-209ENST00000553280 HAUS7Q99871 368 aa7.11□□□□□ -1.27
SCFD1-209ENST00000553280 DPH2Q9BQC3 489 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-209ENST00000553280 FOXQ1Q9C009 403 aa7.11□□□□□ -1.27
SCFD1-209ENST00000553280 METTL14Q9HCE5 456 aaKnown RBP7.11□□□□□ -1.27
SCFD1-209ENST00000553280 CCDC39Q9UFE4 941 aa7.11□□□□□ -1.27
SCFD1-209ENST00000553280 C9IYK1 514 aa7.1□□□□□ -1.27
SCFD1-209ENST00000553280 EPHX1P07099 455 aa7.1□□□□□ -1.27
SCFD1-209ENST00000553280 HSP90AA2PQ14568 343 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-209ENST00000553280 TM4SF20Q53R12 229 aa7.1□□□□□ -1.27
SCFD1-209ENST00000553280 AXDND1Q5T1B0 1012 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-209ENST00000553280 FOXB2Q5VYV0 432 aa7.1□□□□□ -1.27
SCFD1-209ENST00000553280 TDRD10Q5VZ19 366 aaKnown RBP7.1□□□□□ -1.27
SCFD1-209ENST00000553280 HEATR6Q6AI08 1181 aaKnown RBP7.1□□□□□ -1.27
SCFD1-209ENST00000553280 DHRS4Q9BTZ2 278 aa7.1□□□□□ -1.27
SCFD1-209ENST00000553280 KLHL25Q9H0H3 589 aa7.1□□□□□ -1.27
SCFD1-209ENST00000553280 ARHGEF4Q9NR80 690 aa7.1□□□□□ -1.27
SCFD1-209ENST00000553280 ZC3H7BQ9UGR2 993 aaKnown RBP7.1□□□□□ -1.27
SCFD1-209ENST00000553280 PCOLCE2Q9UKZ9 415 aa7.1□□□□□ -1.27
SCFD1-209ENST00000553280 CBFA2T2O43439 604 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 LRIG2O94898 1065 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 FAM87AP0C7U9 286 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 TAL1P17542 331 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-209ENST00000553280 L1CAMP32004 1257 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 C21orf62-AS1Q17RA5 79 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 OGFOD3Q6PK18 319 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.09□□□□□ -1.27
SCFD1-209ENST00000553280 SCUBE1Q8IWY4 988 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 ZNF513Q8N8E2 541 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-209ENST00000553280 MFSD2AQ8NA29 543 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 PPP1R13LQ8WUF5 828 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 MFSD3Q96ES6 412 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 EXOC2Q96KP1 924 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 SSU72Q9NP77 194 aaKnown RBP7.09□□□□□ -1.27
SCFD1-209ENST00000553280 FAM86C1Q9NVL1 165 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 CEP131Q9UPN4 1083 aa7.09□□□□□ -1.27
SCFD1-209ENST00000553280 TRAV20A0A0B4J274 112 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms