RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 EN2P19622 333 aaPredicted RBP22.88■■□□□ 1.25
PTCH1-227ENST00000553256 MFAP1P55081 439 aaKnown RBP22.88■■□□□ 1.25
PTCH1-227ENST00000553256 TMEM132BQ14DG7 1078 aa22.88■■□□□ 1.25
PTCH1-227ENST00000553256 PLEKHH3Q7Z736 793 aa22.88■■□□□ 1.25
PTCH1-227ENST00000553256 STAG1Q8WVM7 1258 aa22.88■■□□□ 1.25
PTCH1-227ENST00000553256 SHISA4Q96DD7 197 aa22.88■■□□□ 1.25
PTCH1-227ENST00000553256 SPATC1LQ9H0A9 340 aa22.88■■□□□ 1.25
PTCH1-227ENST00000553256 INHAP05111 366 aa22.87■■□□□ 1.25
PTCH1-227ENST00000553256 HAND2P61296 217 aa22.87■■□□□ 1.25
PTCH1-227ENST00000553256 GRB14Q14449 540 aa22.87■■□□□ 1.25
PTCH1-227ENST00000553256 MAP3K21Q5TCX8 1036 aa22.87■■□□□ 1.25
PTCH1-227ENST00000553256 SKAP1Q86WV1 359 aa22.87■■□□□ 1.25
PTCH1-227ENST00000553256 SHCBP1Q8NEM2 672 aa22.87■■□□□ 1.25
PTCH1-227ENST00000553256 SOCS4Q8WXH5 440 aa22.87■■□□□ 1.25
PTCH1-227ENST00000553256 TRIB2Q92519 343 aa22.87■■□□□ 1.25
PTCH1-227ENST00000553256 TCP11L1Q9NUJ3 509 aa22.87■■□□□ 1.25
PTCH1-227ENST00000553256 ZNF214Q9UL59 606 aaPredicted RBP22.87■■□□□ 1.25
PTCH1-227ENST00000553256 MYH4Q9Y623 1939 aa22.86■■□□□ 1.25
PTCH1-227ENST00000553256 VWA5AO00534 786 aa22.86■■□□□ 1.25
PTCH1-227ENST00000553256 HOXC6P09630 235 aa22.86■■□□□ 1.25
PTCH1-227ENST00000553256 PTPREP23469 700 aa22.86■■□□□ 1.25
PTCH1-227ENST00000553256 CCNA1P78396 465 aa22.86■■□□□ 1.25
PTCH1-227ENST00000553256 TRIM32Q13049 653 aa22.86■■□□□ 1.25
PTCH1-227ENST00000553256 AKNAD1Q5T1N1 836 aa22.86■■□□□ 1.25
PTCH1-227ENST00000553256 CENPQQ7L2Z9 268 aaPredicted RBP22.86■■□□□ 1.25
PTCH1-227ENST00000553256 LRRC47Q8N1G4 583 aaKnown RBP22.86■■□□□ 1.25
PTCH1-227ENST00000553256 NUDT12Q9BQG2 462 aa22.86■■□□□ 1.25
PTCH1-227ENST00000553256 LAMA4Q16363 1823 aa22.86■■□□□ 1.25
PTCH1-227ENST00000553256 RAD50Q92878 1312 aa22.85■■□□□ 1.25
PTCH1-227ENST00000553256 PCP11498 1178 aaKnown RBP22.85■■□□□ 1.25
PTCH1-227ENST00000553256 CCL5P13501 91 aa22.85■■□□□ 1.25
PTCH1-227ENST00000553256 RCSD1Q6JBY9 416 aa22.85■■□□□ 1.25
PTCH1-227ENST00000553256 UNC93B1Q9H1C4 597 aa22.85■■□□□ 1.25
PTCH1-227ENST00000553256 PAK6Q9NQU5 681 aaPredicted RBP22.85■■□□□ 1.25
PTCH1-227ENST00000553256 ZNF236Q9UL36 1845 aa22.85■■□□□ 1.25
PTCH1-227ENST00000553256 NEDD4P46934 1319 aa22.84■■□□□ 1.25
PTCH1-227ENST00000553256 SLC15A5A6NIM6 579 aa22.84■■□□□ 1.25
PTCH1-227ENST00000553256 TSPY2A6NKD2 308 aa22.84■■□□□ 1.25
PTCH1-227ENST00000553256 GJB1P08034 283 aa22.84■■□□□ 1.25
PTCH1-227ENST00000553256 UBE2Q1Q7Z7E8 422 aa22.84■■□□□ 1.25
PTCH1-227ENST00000553256 GMCL1Q96IK5 515 aa22.84■■□□□ 1.25
PTCH1-227ENST00000553256 SGSM2O43147 1006 aa22.83■■□□□ 1.25
PTCH1-227ENST00000553256 RANBP6O60518 1105 aaKnown RBP22.83■■□□□ 1.25
PTCH1-227ENST00000553256 MYCP01106 439 aaPredicted RBP22.83■■□□□ 1.25
PTCH1-227ENST00000553256 HMGCRP04035 888 aa22.83■■□□□ 1.25
PTCH1-227ENST00000553256 ERCC3P19447 782 aa22.83■■□□□ 1.25
PTCH1-227ENST00000553256 CYP2B6P20813 491 aa22.83■■□□□ 1.25
PTCH1-227ENST00000553256 GJA8P48165 433 aa22.83■■□□□ 1.25
PTCH1-227ENST00000553256 MAP2K5Q13163 448 aa22.83■■□□□ 1.25
PTCH1-227ENST00000553256 SLF1Q9BQI6 1058 aa22.83■■□□□ 1.25
PTCH1-227ENST00000553256 TMEM106CQ9BVX2 250 aa22.83■■□□□ 1.25
PTCH1-227ENST00000553256 PDE4DIPQ5VU43 2346 aa22.82■■□□□ 1.24
PTCH1-227ENST00000553256 ATP2A1O14983 1001 aa22.82■■□□□ 1.24
PTCH1-227ENST00000553256 UBXN2AP68543 259 aa22.82■■□□□ 1.24
PTCH1-227ENST00000553256 CCL14Q16627 93 aa22.82■■□□□ 1.24
PTCH1-227ENST00000553256 SLFN13Q68D06 897 aa22.82■■□□□ 1.24
PTCH1-227ENST00000553256 RASGRP2Q7LDG7 609 aa22.82■■□□□ 1.24
PTCH1-227ENST00000553256 RIOX2Q8IUF8 465 aa22.82■■□□□ 1.24
PTCH1-227ENST00000553256 FLRT1Q9NZU1 646 aa22.82■■□□□ 1.24
PTCH1-227ENST00000553256 COL11A1P12107 1806 aaPredicted RBP22.82■■□□□ 1.24
PTCH1-227ENST00000553256 PLA2G6O60733 806 aa22.81■■□□□ 1.24
PTCH1-227ENST00000553256 RGS2P41220 211 aa22.81■■□□□ 1.24
PTCH1-227ENST00000553256 PTH1RQ03431 593 aa22.81■■□□□ 1.24
PTCH1-227ENST00000553256 PPP4R3BQ5MIZ7 849 aa22.81■■□□□ 1.24
PTCH1-227ENST00000553256 APBA2Q99767 749 aa22.81■■□□□ 1.24
PTCH1-227ENST00000553256 CRISPLD2Q9H0B8 497 aa22.81■■□□□ 1.24
PTCH1-227ENST00000553256 ZNF213O14771 459 aa22.8■■□□□ 1.24
PTCH1-227ENST00000553256 NT5C2P49902 561 aa22.8■■□□□ 1.24
PTCH1-227ENST00000553256 MFSD6Q6ZSS7 791 aa22.8■■□□□ 1.24
PTCH1-227ENST00000553256 ABRAQ8N0Z2 381 aa22.8■■□□□ 1.24
PTCH1-227ENST00000553256 PRPF38AQ8NAV1 312 aaKnown RBP22.8■■□□□ 1.24
PTCH1-227ENST00000553256 NPLOC4Q8TAT6 608 aa22.8■■□□□ 1.24
PTCH1-227ENST00000553256 TMEM47Q9BQJ4 181 aa22.8■■□□□ 1.24
PTCH1-227ENST00000553256 RNF208Q9H0X6 261 aa22.8■■□□□ 1.24
PTCH1-227ENST00000553256 MROH8Q9H579 483 aa22.8■■□□□ 1.24
PTCH1-227ENST00000553256 SLC38A10Q9HBR0 1119 aa22.8■■□□□ 1.24
PTCH1-227ENST00000553256 STX8Q9UNK0 236 aa22.8■■□□□ 1.24
PTCH1-227ENST00000553256 STRNO43815 780 aa22.79■■□□□ 1.24
PTCH1-227ENST00000553256 COBLO75128 1261 aa22.79■■□□□ 1.24
PTCH1-227ENST00000553256 BMP3P12645 472 aa22.79■■□□□ 1.24
PTCH1-227ENST00000553256 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.79■■□□□ 1.24
PTCH1-227ENST00000553256 ANKS1AQ92625 1134 aa22.79■■□□□ 1.24
PTCH1-227ENST00000553256 RNF41Q9H4P4 317 aaPredicted RBP22.79■■□□□ 1.24
PTCH1-227ENST00000553256 FEM1BQ9UK73 627 aa22.79■■□□□ 1.24
PTCH1-227ENST00000553256 RIPK3Q9Y572 518 aa22.79■■□□□ 1.24
PTCH1-227ENST00000553256 SGPL1O95470 568 aa22.78■■□□□ 1.24
PTCH1-227ENST00000553256 SLC25A27O95847 323 aa22.78■■□□□ 1.24
PTCH1-227ENST00000553256 STAT3P40763 770 aa22.78■■□□□ 1.24
PTCH1-227ENST00000553256 RRP12Q5JTH9 1297 aaKnown RBP22.78■■□□□ 1.24
PTCH1-227ENST00000553256 TRMT44Q8IYL2 757 aaKnown RBP22.78■■□□□ 1.24
PTCH1-227ENST00000553256 U2AF1L4Q8WU68 220 aaKnown RBP22.78■■□□□ 1.24
PTCH1-227ENST00000553256 TTC14Q96N46 770 aa22.78■■□□□ 1.24
PTCH1-227ENST00000553256 RAD21O60216 631 aa22.77■■□□□ 1.24
PTCH1-227ENST00000553256 SNHG28P0DPA3 235 aa22.77■■□□□ 1.24
PTCH1-227ENST00000553256 MCCP23508 829 aa22.77■■□□□ 1.24
PTCH1-227ENST00000553256 ADORA2AP29274 412 aa22.77■■□□□ 1.24
PTCH1-227ENST00000553256 CACNB2Q08289 660 aaPredicted RBP22.77■■□□□ 1.24
PTCH1-227ENST00000553256 BMP2KLQ5H9B9 411 aa22.77■■□□□ 1.24
PTCH1-227ENST00000553256 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.77■■□□□ 1.24
PTCH1-227ENST00000553256 BIN2Q9UBW5 565 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms