RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 INHAP05111 366 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 EN2P19622 333 aaPredicted RBP22.25■■□□□ 1.15
HDAC4-217ENST00000553145 CYP2B6P20813 491 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 CHMLP26374 656 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 RRP12Q5JTH9 1297 aaKnown RBP22.25■■□□□ 1.15
HDAC4-217ENST00000553145 MORN1Q5T089 497 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 MB21D1Q8N884 522 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 GMCL1P1Q8NEA9 526 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 SOCS4Q8WXH5 440 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 USP6NLQ92738 828 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 NUDT12Q9BQG2 462 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 DSCC1Q9BVC3 393 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 SPATC1LQ9H0A9 340 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 TOMM22Q9NS69 142 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 PPP1R9AQ9ULJ8 1098 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 SYNPO2Q9UMS6 1093 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 ADAMTS5Q9UNA0 930 aa22.25■■□□□ 1.15
HDAC4-217ENST00000553145 COL11A1P12107 1806 aaPredicted RBP22.24■■□□□ 1.15
HDAC4-217ENST00000553145 CCL5P13501 91 aa22.24■■□□□ 1.15
HDAC4-217ENST00000553145 UBXN2AP68543 259 aa22.24■■□□□ 1.15
HDAC4-217ENST00000553145 AKNAD1Q5T1N1 836 aa22.24■■□□□ 1.15
HDAC4-217ENST00000553145 WDR78Q5VTH9 848 aa22.24■■□□□ 1.15
HDAC4-217ENST00000553145 STAG1Q8WVM7 1258 aa22.24■■□□□ 1.15
HDAC4-217ENST00000553145 NOVP48745 357 aa22.23■■□□□ 1.15
HDAC4-217ENST00000553145 TRIM32Q13049 653 aa22.23■■□□□ 1.15
HDAC4-217ENST00000553145 TMEM132BQ14DG7 1078 aa22.23■■□□□ 1.15
HDAC4-217ENST00000553145 TRIB2Q92519 343 aa22.23■■□□□ 1.15
HDAC4-217ENST00000553145 UNC93B1Q9H1C4 597 aa22.23■■□□□ 1.15
HDAC4-217ENST00000553145 CWC22Q9HCG8 908 aaKnown RBP22.23■■□□□ 1.15
HDAC4-217ENST00000553145 STX8Q9UNK0 236 aa22.23■■□□□ 1.15
HDAC4-217ENST00000553145 NEDD4P46934 1319 aa22.23■■□□□ 1.15
HDAC4-217ENST00000553145 RAD50Q92878 1312 aa22.23■■□□□ 1.15
HDAC4-217ENST00000553145 KIAA0100Q14667 2235 aaKnown RBP22.23■■□□□ 1.15
HDAC4-217ENST00000553145 ZNF213O14771 459 aa22.22■■□□□ 1.15
HDAC4-217ENST00000553145 PTPREP23469 700 aa22.22■■□□□ 1.15
HDAC4-217ENST00000553145 PLS1Q14651 629 aa22.22■■□□□ 1.15
HDAC4-217ENST00000553145 SLFN13Q68D06 897 aa22.22■■□□□ 1.15
HDAC4-217ENST00000553145 RASGRP2Q7LDG7 609 aa22.22■■□□□ 1.15
HDAC4-217ENST00000553145 REPS2Q8NFH8 660 aa22.22■■□□□ 1.15
HDAC4-217ENST00000553145 SLF1Q9BQI6 1058 aa22.22■■□□□ 1.15
HDAC4-217ENST00000553145 VWA5AO00534 786 aa22.21■■□□□ 1.15
HDAC4-217ENST00000553145 HMGCRP04035 888 aa22.21■■□□□ 1.15
HDAC4-217ENST00000553145 ERCC3P19447 782 aa22.21■■□□□ 1.15
HDAC4-217ENST00000553145 MAP2K5Q13163 448 aa22.21■■□□□ 1.15
HDAC4-217ENST00000553145 GRB14Q14449 540 aa22.21■■□□□ 1.15
HDAC4-217ENST00000553145 MFSD6Q6ZSS7 791 aa22.21■■□□□ 1.15
HDAC4-217ENST00000553145 SHCBP1Q8NEM2 672 aa22.21■■□□□ 1.15
HDAC4-217ENST00000553145 CHMP4CQ96CF2 233 aa22.21■■□□□ 1.15
HDAC4-217ENST00000553145 RNF208Q9H0X6 261 aa22.21■■□□□ 1.15
HDAC4-217ENST00000553145 SLC15A5A6NIM6 579 aa22.2■■□□□ 1.14
HDAC4-217ENST00000553145 PCP11498 1178 aaKnown RBP22.2■■□□□ 1.14
HDAC4-217ENST00000553145 XRCC5P13010 732 aaKnown RBP22.2■■□□□ 1.14
HDAC4-217ENST00000553145 RGS2P41220 211 aa22.2■■□□□ 1.14
HDAC4-217ENST00000553145 CCL14Q16627 93 aa22.2■■□□□ 1.14
HDAC4-217ENST00000553145 SHISA4Q96DD7 197 aa22.2■■□□□ 1.14
HDAC4-217ENST00000553145 APBA2Q99767 749 aa22.2■■□□□ 1.14
HDAC4-217ENST00000553145 ZNF214Q9UL59 606 aaPredicted RBP22.2■■□□□ 1.14
HDAC4-217ENST00000553145 ZNF236Q9UL36 1845 aa22.2■■□□□ 1.14
HDAC4-217ENST00000553145 BMP3P12645 472 aa22.19■■□□□ 1.14
HDAC4-217ENST00000553145 PTH1RQ03431 593 aa22.19■■□□□ 1.14
HDAC4-217ENST00000553145 PPP4R3BQ5MIZ7 849 aa22.19■■□□□ 1.14
HDAC4-217ENST00000553145 NCAPG2Q86XI2 1143 aa22.19■■□□□ 1.14
HDAC4-217ENST00000553145 RUFY2Q8WXA3 655 aa22.19■■□□□ 1.14
HDAC4-217ENST00000553145 RNF41Q9H4P4 317 aaPredicted RBP22.19■■□□□ 1.14
HDAC4-217ENST00000553145 TCP11L1Q9NUJ3 509 aa22.19■■□□□ 1.14
HDAC4-217ENST00000553145 IVNS1ABPQ9Y6Y0 642 aa22.19■■□□□ 1.14
HDAC4-217ENST00000553145 SGSM2O43147 1006 aa22.18■■□□□ 1.14
HDAC4-217ENST00000553145 GJB1P08034 283 aa22.18■■□□□ 1.14
HDAC4-217ENST00000553145 MCCP23508 829 aa22.18■■□□□ 1.14
HDAC4-217ENST00000553145 PRPF38AQ8NAV1 312 aaKnown RBP22.18■■□□□ 1.14
HDAC4-217ENST00000553145 KIFC2Q96AC6 838 aa22.18■■□□□ 1.14
HDAC4-217ENST00000553145 GMCL1Q96IK5 515 aa22.18■■□□□ 1.14
HDAC4-217ENST00000553145 CTNNA3Q9UI47 895 aa22.18■■□□□ 1.14
HDAC4-217ENST00000553145 FEM1BQ9UK73 627 aa22.18■■□□□ 1.14
HDAC4-217ENST00000553145 BRCA2P51587 3418 aa22.18■■□□□ 1.14
HDAC4-217ENST00000553145 ZKSCAN1P17029 563 aaPredicted RBP22.17■■□□□ 1.14
HDAC4-217ENST00000553145 IMMTQ16891 758 aaKnown RBP22.17■■□□□ 1.14
HDAC4-217ENST00000553145 RCSD1Q6JBY9 416 aa22.17■■□□□ 1.14
HDAC4-217ENST00000553145 RIOX2Q8IUF8 465 aa22.17■■□□□ 1.14
HDAC4-217ENST00000553145 NPLOC4Q8TAT6 608 aa22.17■■□□□ 1.14
HDAC4-217ENST00000553145 CCDC136Q96JN2 1154 aa22.17■■□□□ 1.14
HDAC4-217ENST00000553145 MROH8Q9H579 483 aa22.17■■□□□ 1.14
HDAC4-217ENST00000553145 PAK6Q9NQU5 681 aaPredicted RBP22.17■■□□□ 1.14
HDAC4-217ENST00000553145 FLRT1Q9NZU1 646 aa22.17■■□□□ 1.14
HDAC4-217ENST00000553145 MTMR7Q9Y216 660 aa22.17■■□□□ 1.14
HDAC4-217ENST00000553145 TMEM232C9JQI7 657 aa22.16■■□□□ 1.14
HDAC4-217ENST00000553145 ADORA2AP29274 412 aa22.16■■□□□ 1.14
HDAC4-217ENST00000553145 STAT3P40763 770 aa22.16■■□□□ 1.14
HDAC4-217ENST00000553145 SLC1A4P43007 532 aa22.16■■□□□ 1.14
HDAC4-217ENST00000553145 GJA8P48165 433 aa22.16■■□□□ 1.14
HDAC4-217ENST00000553145 MAP3K21Q5TCX8 1036 aa22.16■■□□□ 1.14
HDAC4-217ENST00000553145 ESR2Q92731 530 aa22.16■■□□□ 1.14
HDAC4-217ENST00000553145 TMEM47Q9BQJ4 181 aa22.16■■□□□ 1.14
HDAC4-217ENST00000553145 ZKSCAN3Q9BRR0 538 aa22.16■■□□□ 1.14
HDAC4-217ENST00000553145 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.16■■□□□ 1.14
HDAC4-217ENST00000553145 ISY1Q9ULR0 285 aaKnown RBP22.16■■□□□ 1.14
HDAC4-217ENST00000553145 B4E1Z4 1266 aa22.15■■□□□ 1.14
HDAC4-217ENST00000553145 STRNO43815 780 aa22.15■■□□□ 1.14
HDAC4-217ENST00000553145 KDM4AO75164 1064 aa22.15■■□□□ 1.14
HDAC4-217ENST00000553145 SLC25A27O95847 323 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms