RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 NYAP2Q9P242 653 aa12.65□□□□□ -0.38
DDX23-217ENST00000553065 ZNF214Q9UL59 606 aaPredicted RBP12.65□□□□□ -0.38
DDX23-217ENST00000553065 RIPK3Q9Y572 518 aa12.65□□□□□ -0.38
DDX23-217ENST00000553065 VWA5AO00534 786 aa12.64□□□□□ -0.39
DDX23-217ENST00000553065 SOX1O00570 391 aaPredicted RBP12.64□□□□□ -0.39
DDX23-217ENST00000553065 STRNO43815 780 aa12.64□□□□□ -0.39
DDX23-217ENST00000553065 EVI5O60447 810 aa12.64□□□□□ -0.39
DDX23-217ENST00000553065 GLRX3O76003 335 aaKnown RBP12.64□□□□□ -0.39
DDX23-217ENST00000553065 CYBAP13498 195 aa12.64□□□□□ -0.39
DDX23-217ENST00000553065 MX1P20591 662 aa12.64□□□□□ -0.39
DDX23-217ENST00000553065 PDE1AP54750 535 aa12.64□□□□□ -0.39
DDX23-217ENST00000553065 ATP2B2Q01814 1243 aa12.64□□□□□ -0.39
DDX23-217ENST00000553065 LRRC26Q2I0M4 334 aa12.64□□□□□ -0.39
DDX23-217ENST00000553065 CCAR1Q8IX12 1150 aaKnown RBP12.64□□□□□ -0.39
DDX23-217ENST00000553065 C11orf49Q9H6J7 331 aa12.64□□□□□ -0.39
DDX23-217ENST00000553065 CLIP2Q9UDT6 1046 aa12.64□□□□□ -0.39
DDX23-217ENST00000553065 PPP1R9AQ9ULJ8 1098 aa12.64□□□□□ -0.39
DDX23-217ENST00000553065 ZNFX1Q9P2E3 1918 aaKnown RBP12.63□□□□□ -0.39
DDX23-217ENST00000553065 NDUFB10O96000 172 aa12.63□□□□□ -0.39
DDX23-217ENST00000553065 PGK2P07205 417 aa12.63□□□□□ -0.39
DDX23-217ENST00000553065 FAM47AQ5JRC9 791 aa12.63□□□□□ -0.39
DDX23-217ENST00000553065 OLFML2BQ68BL8 750 aa12.63□□□□□ -0.39
DDX23-217ENST00000553065 RIOX2Q8IUF8 465 aa12.63□□□□□ -0.39
DDX23-217ENST00000553065 MB21D1Q8N884 522 aa12.63□□□□□ -0.39
DDX23-217ENST00000553065 CEP95Q96GE4 821 aa12.63□□□□□ -0.39
DDX23-217ENST00000553065 MROH8Q9H579 483 aa12.63□□□□□ -0.39
DDX23-217ENST00000553065 MKNK2Q9HBH9 465 aa12.63□□□□□ -0.39
DDX23-217ENST00000553065 IL17RBQ9NRM6 502 aa12.63□□□□□ -0.39
DDX23-217ENST00000553065 MTMR4Q9NYA4 1195 aa12.63□□□□□ -0.39
DDX23-217ENST00000553065 ZMYND8Q9ULU4 1186 aaPredicted RBP12.63□□□□□ -0.39
DDX23-217ENST00000553065 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.63□□□□□ -0.39
DDX23-217ENST00000553065 NR2E3Q9Y5X4 410 aa12.63□□□□□ -0.39
DDX23-217ENST00000553065 SMCHD1A6NHR9 2005 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 TAL1P17542 331 aaPredicted RBP12.62□□□□□ -0.39
DDX23-217ENST00000553065 SYN1P17600 705 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 STAT3P40763 770 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 PLS1Q14651 629 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 ZNF792Q3KQV3 632 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 MFSD14CQ5VZR4 134 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 ANO1Q5XXA6 986 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 SAMD1Q6SPF0 538 aaPredicted RBP12.62□□□□□ -0.39
DDX23-217ENST00000553065 DPP9Q86TI2 863 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 NCAPG2Q86XI2 1143 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 C7orf61Q8IZ16 206 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 ABRAQ8N0Z2 381 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 NEDD1Q8NHV4 660 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 GPATCH3Q96I76 525 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 MAML3Q96JK9 1138 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 DDX20Q9UHI6 824 aaKnown RBP12.62□□□□□ -0.39
DDX23-217ENST00000553065 MYH8P13535 1937 aa12.62□□□□□ -0.39
DDX23-217ENST00000553065 COL11A1P12107 1806 aaPredicted RBP12.62□□□□□ -0.39
DDX23-217ENST00000553065 ERC2O15083 957 aa12.61□□□□□ -0.39
DDX23-217ENST00000553065 APPP05067 770 aa12.61□□□□□ -0.39
DDX23-217ENST00000553065 FGRP09769 529 aa12.61□□□□□ -0.39
DDX23-217ENST00000553065 GNAT2P19087 354 aa12.61□□□□□ -0.39
DDX23-217ENST00000553065 NOVP48745 357 aa12.61□□□□□ -0.39
DDX23-217ENST00000553065 CTDSPL2Q05D32 466 aa12.61□□□□□ -0.39
DDX23-217ENST00000553065 SMC5Q8IY18 1101 aa12.61□□□□□ -0.39
DDX23-217ENST00000553065 DDRGK1Q96HY6 314 aa12.61□□□□□ -0.39
DDX23-217ENST00000553065 FAM227BQ96M60 508 aa12.61□□□□□ -0.39
DDX23-217ENST00000553065 YTHDC1Q96MU7 727 aaKnown RBP12.61□□□□□ -0.39
DDX23-217ENST00000553065 FSD1Q9BTV5 496 aa12.61□□□□□ -0.39
DDX23-217ENST00000553065 SH2D4AQ9H788 454 aa12.61□□□□□ -0.39
DDX23-217ENST00000553065 IVNS1ABPQ9Y6Y0 642 aa12.61□□□□□ -0.39
DDX23-217ENST00000553065 LAMA2P24043 3122 aaKnown RBP12.61□□□□□ -0.39
DDX23-217ENST00000553065 DNAJC25-GNG10A0A024R161 153 aa12.6□□□□□ -0.39
DDX23-217ENST00000553065 NMT2O60551 498 aa12.6□□□□□ -0.39
DDX23-217ENST00000553065 ZNF865P0CJ78 1059 aaPredicted RBP12.6□□□□□ -0.39
DDX23-217ENST00000553065 BMP8BP34820 402 aa12.6□□□□□ -0.39
DDX23-217ENST00000553065 TDO2P48775 406 aa12.6□□□□□ -0.39
DDX23-217ENST00000553065 TFAP4Q01664 338 aa12.6□□□□□ -0.39
DDX23-217ENST00000553065 PPARAQ07869 468 aa12.6□□□□□ -0.39
DDX23-217ENST00000553065 GJC2Q5T442 439 aaPredicted RBP12.6□□□□□ -0.39
DDX23-217ENST00000553065 RASGRP2Q7LDG7 609 aa12.6□□□□□ -0.39
DDX23-217ENST00000553065 AMOTL1Q8IY63 956 aa12.6□□□□□ -0.39
DDX23-217ENST00000553065 ZNF444Q8N0Y2 327 aaPredicted RBP12.6□□□□□ -0.39
DDX23-217ENST00000553065 EXOC6Q8TAG9 804 aa12.6□□□□□ -0.39
DDX23-217ENST00000553065 FGD4Q96M96 766 aa12.6□□□□□ -0.39
DDX23-217ENST00000553065 GOPCQ9HD26 462 aa12.6□□□□□ -0.39
DDX23-217ENST00000553065 ZNF236Q9UL36 1845 aa12.6□□□□□ -0.39
DDX23-217ENST00000553065 A0A0D9SFI3 127 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 ATP2A1O14983 1001 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 SLC25A27O95847 323 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 SNAI1O95863 264 aaPredicted RBP12.59□□□□□ -0.39
DDX23-217ENST00000553065 FGAP02671 866 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 FCER1AP12319 257 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 CNGA1P29973 690 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 ALX1Q15699 326 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 ZNF589Q86UQ0 364 aaPredicted RBP12.59□□□□□ -0.39
DDX23-217ENST00000553065 LRRC47Q8N1G4 583 aaKnown RBP12.59□□□□□ -0.39
DDX23-217ENST00000553065 PRPF38AQ8NAV1 312 aaKnown RBP12.59□□□□□ -0.39
DDX23-217ENST00000553065 EVI5LQ96CN4 794 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 LRCH3Q96II8 777 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 SLF1Q9BQI6 1058 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 LNPKQ9C0E8 428 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 SENP6Q9GZR1 1112 aaPredicted RBP12.59□□□□□ -0.39
DDX23-217ENST00000553065 CWC22Q9HCG8 908 aaKnown RBP12.59□□□□□ -0.39
DDX23-217ENST00000553065 ANAPC4Q9UJX5 808 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 ZNF536O15090 1300 aa12.59□□□□□ -0.39
DDX23-217ENST00000553065 COL6A3P12111 3177 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms