RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ZSWIM5Q9P217 1185 aa12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 LAMA4Q16363 1823 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 B4E1Z4 1266 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 E7EWF7 191 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 NDUFB10O96000 172 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 CALM1P0DP23 149 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 CALM2P0DP24 149 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 CALM3P0DP25 149 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 CYP2C8P10632 490 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 DSG3P32926 999 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 PPP2R5BQ15173 497 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 NECTIN1Q15223 517 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 ASPRV1Q53RT3 343 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 CREB3L3Q68CJ9 461 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 FBXO46Q6PJ61 603 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 CATIPQ7Z7H3 387 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 CCDC84Q86UT8 332 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 SIAH1Q8IUQ4 282 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 TBC1D10CQ8IV04 446 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 SHCBP1Q8NEM2 672 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 SOCS4Q8WXH5 440 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 MAP3K14Q99558 947 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 P2RX7Q99572 595 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 UPF2Q9HAU5 1272 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 FBXO40Q9UH90 709 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 PPP1R9AQ9ULJ8 1098 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 ISY1Q9ULR0 285 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 ADGRA2Q96PE1 1338 aa12.03□□□□□ -0.48
TRAFD1-208ENST00000552890 TNPO2O14787 897 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 IFIT3O14879 490 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 SLC27A2O14975 620 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 ATP2A1O14983 1001 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 KIF5BP33176 963 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 PSMC4P43686 418 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 GNAQP50148 359 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 ERVK-9P63128 1117 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 ERVK-24P63145 666 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 FGD1P98174 961 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 WTAPQ15007 396 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 TKFCQ3LXA3 575 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 ABRAQ8N0Z2 381 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 SPICE1Q8N0Z3 855 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 ANKRD13CQ8N6S4 541 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 CHMP4CQ96CF2 233 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 LZTS2Q9BRK4 669 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 IL17RBQ9NRM6 502 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 CPA4Q9UI42 421 aa12.02□□□□□ -0.49
TRAFD1-208ENST00000552890 GREB1LQ9C091 1923 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 LIFRP42702 1097 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 ANAPC15P60006 121 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 EVX2Q03828 476 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 CCDC96Q2M329 555 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 TMEM67Q5HYA8 995 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 FAM83BQ5T0W9 1011 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 PNMA1Q8ND90 353 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 NEK1Q96PY6 1258 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 TMEM47Q9BQJ4 181 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 TEX13BQ9BXU2 312 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 TSKSQ9UJT2 592 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 ADAMTS5Q9UNA0 930 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 TRIM17Q9Y577 477 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 TNKSO95271 1327 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 NEDD4P46934 1319 aa12.01□□□□□ -0.49
TRAFD1-208ENST00000552890 CCDC196A0A1B0GTZ2 297 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 CCDC69A6NI79 296 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 SPDYE16A6NNV3 312 aaPredicted RBP12□□□□□ -0.49
TRAFD1-208ENST00000552890 PARP1P09874 1014 aaKnown RBP12□□□□□ -0.49
TRAFD1-208ENST00000552890 HSPA4P34932 840 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 RCAN1P53805 252 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 IRF5Q13568 498 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 DGKZQ13574 1117 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 SHROOM1Q2M3G4 852 aaPredicted RBP12□□□□□ -0.49
TRAFD1-208ENST00000552890 BTNL9Q6UXG8 535 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 DHX32Q7L7V1 743 aaKnown RBP12□□□□□ -0.49
TRAFD1-208ENST00000552890 OTOP1Q7RTM1 612 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 TNS4Q8IZW8 715 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 ENAHQ8N8S7 591 aaPredicted RBP12□□□□□ -0.49
TRAFD1-208ENST00000552890 CD99L2Q8TCZ2 262 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 RAET1EQ8TD07 263 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 TRIM47Q96LD4 638 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 NUDT12Q9BQG2 462 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 PAGR1Q9BTK6 254 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 NBPF3Q9H094 633 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 SPATC1LQ9H0A9 340 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 SRRDQ9UH36 339 aa12□□□□□ -0.49
TRAFD1-208ENST00000552890 MYH4Q9Y623 1939 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 SLC15A5A6NIM6 579 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 TMEM232C9JQI7 657 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 SMIM22K7EJ46 135 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 VWA5AO00534 786 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 DDAH1O94760 285 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 SNHG28P0DPA3 235 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 XRCC5P13010 732 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 SMARCA1P28370 1054 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 STAT3P40763 770 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 BLOC1S2Q6QNY1 142 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 NFXL1Q6ZNB6 911 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 PLEKHH3Q7Z736 793 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 TEX2Q8IWB9 1127 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms