RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 CXXC1Q9P0U4 656 aaPredicted RBP13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 PRRC2BQ5JSZ5 2229 aaKnown RBP13.92□□□□□ -0.18
SUPT16H-202ENST00000552829 A0A1W2PRG0 241 aa13.91□□□□□ -0.18
SUPT16H-202ENST00000552829 DCDC2CA8MYV0 355 aa13.91□□□□□ -0.18
SUPT16H-202ENST00000552829 ZNF865P0CJ78 1059 aaPredicted RBP13.91□□□□□ -0.18
SUPT16H-202ENST00000552829 TAL1P17542 331 aaPredicted RBP13.91□□□□□ -0.18
SUPT16H-202ENST00000552829 DSG3P32926 999 aa13.91□□□□□ -0.18
SUPT16H-202ENST00000552829 CCDC85BQ15834 202 aaPredicted RBP13.91□□□□□ -0.18
SUPT16H-202ENST00000552829 CCSAPQ6IQ19 270 aaPredicted RBP13.91□□□□□ -0.18
SUPT16H-202ENST00000552829 MB21D1Q8N884 522 aa13.91□□□□□ -0.18
SUPT16H-202ENST00000552829 KLHDC9Q8NEP7 349 aa13.91□□□□□ -0.18
SUPT16H-202ENST00000552829 COL11A1P12107 1806 aaPredicted RBP13.91□□□□□ -0.18
SUPT16H-202ENST00000552829 XIRP2A4UGR9 3374 aa13.91□□□□□ -0.18
SUPT16H-202ENST00000552829 CDK7P50613 346 aa13.9□□□□□ -0.18
SUPT16H-202ENST00000552829 ACLYP53396 1101 aa13.9□□□□□ -0.18
SUPT16H-202ENST00000552829 PPIGQ13427 754 aaKnown RBP eCLIP13.9□□□□□ -0.18
SUPT16H-202ENST00000552829 SEPT2Q15019 361 aa13.9□□□□□ -0.18
SUPT16H-202ENST00000552829 KIAA1755Q5JYT7 1200 aa13.9□□□□□ -0.18
SUPT16H-202ENST00000552829 LRFN3Q9BTN0 628 aa13.9□□□□□ -0.18
SUPT16H-202ENST00000552829 PIH1D3Q9NQM4 214 aaKnown RBP13.9□□□□□ -0.18
SUPT16H-202ENST00000552829 FCER1AP12319 257 aa13.89□□□□□ -0.19
SUPT16H-202ENST00000552829 GABPAQ06546 454 aa13.89□□□□□ -0.19
SUPT16H-202ENST00000552829 ZNF792Q3KQV3 632 aa13.89□□□□□ -0.19
SUPT16H-202ENST00000552829 CCDC129Q6ZRS4 1044 aa13.89□□□□□ -0.19
SUPT16H-202ENST00000552829 ZNF365Q70YC5 407 aa13.89□□□□□ -0.19
SUPT16H-202ENST00000552829 ZNF512BQ96KM6 892 aaPredicted RBP13.89□□□□□ -0.19
SUPT16H-202ENST00000552829 TINF2Q9BSI4 451 aa13.89□□□□□ -0.19
SUPT16H-202ENST00000552829 CABP5Q9NP86 173 aa13.89□□□□□ -0.19
SUPT16H-202ENST00000552829 GPR108Q9NPR9 543 aa13.89□□□□□ -0.19
SUPT16H-202ENST00000552829 SMC4Q9NTJ3 1288 aa13.89□□□□□ -0.19
SUPT16H-202ENST00000552829 DIS3Q9Y2L1 958 aaKnown RBP13.89□□□□□ -0.19
SUPT16H-202ENST00000552829 E9PSI1 815 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 CSF2RAP15509 400 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 IGFBP4P22692 258 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 RAB30Q15771 203 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 CCDC174Q6PII3 467 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 TTC6Q86TZ1 520 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 NCAPG2Q86XI2 1143 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 CERS3Q8IU89 383 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 IL27Q8NEV9 243 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 NUP133Q8WUM0 1156 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 HERVK_113Q902F9 699 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 LENG1Q96BZ8 264 aaPredicted RBP13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 EPHX3Q9H6B9 360 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 STARD7Q9NQZ5 370 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 NOB1Q9ULX3 412 aaKnown RBP13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 ADAMTS5Q9UNA0 930 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 BRWD1Q9NSI6 2320 aa13.88□□□□□ -0.19
SUPT16H-202ENST00000552829 MOXD2PA6NHM9 499 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 SLC25A27O95847 323 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 CENPBP07199 599 aaPredicted RBP13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 GNAI3P08754 354 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 ACRP10323 421 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 AKR1A1P14550 325 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 CYP7A1P22680 504 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 ZAP70P43403 619 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 PLCD1P51178 756 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 PSRC1Q6PGN9 363 aaPredicted RBP13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 SIAH1Q8IUQ4 282 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 ATG4CQ96DT6 458 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 API5Q9BZZ5 524 aaKnown RBP13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 TANGO6Q9C0B7 1094 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 NKX2-4Q9H2Z4 354 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 MSRAQ9UJ68 235 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 YBX2Q9Y2T7 364 aaKnown RBP13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 ELP1O95163 1332 aa13.87□□□□□ -0.19
SUPT16H-202ENST00000552829 MCM3APO60318 1980 aa13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 PGK2P07205 417 aa13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 CST5P28325 142 aaPredicted RBP13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 USP5P45974 858 aa13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 TFF2Q03403 129 aa13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 G3BP1Q13283 466 aaKnown RBP eCLIP13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 PLS1Q14651 629 aa13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 TMEM132BQ14DG7 1078 aa13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 KCNA10Q16322 511 aa13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 TTC39AQ5SRH9 613 aa13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 DBNDD2Q9BQY9 259 aa13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 MROH7Q68CQ1 1323 aa13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 SYNRGQ9UMZ2 1314 aa13.86□□□□□ -0.19
SUPT16H-202ENST00000552829 PNMA6EA0A0J9YXQ4 647 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 MYADML2A6NDP7 307 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 ERC2O15083 957 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 POU3F3P20264 500 aaPredicted RBP13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 KCNQ1P51787 676 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 TNNI3KQ59H18 835 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 CCDC158Q5M9N0 1113 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 RIOX2Q8IUF8 465 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 TRMT2AQ8IZ69 625 aaKnown RBP13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 PLCD3Q8N3E9 789 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 TMEM199Q8N511 208 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 MIGA1Q8NAN2 632 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 MMP19Q99542 508 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 IL23AQ9NPF7 189 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 HCN4Q9Y3Q4 1203 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 FPGT-TNNI3KV9GXZ4 949 aa13.85□□□□□ -0.19
SUPT16H-202ENST00000552829 FLOT1O75955 427 aa13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 SNAI1O95863 264 aaPredicted RBP13.84□□□□□ -0.19
SUPT16H-202ENST00000552829 CD4P01730 458 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms