RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 ADAMTS5Q9UNA0 930 aa21.54■■□□□ 1.04
PRPF40B-215ENST00000551418 WDR46O15213 610 aaKnown RBP21.53■■□□□ 1.04
PRPF40B-215ENST00000551418 SEPT4O43236 478 aa21.53■■□□□ 1.04
PRPF40B-215ENST00000551418 PGK2P07205 417 aa21.53■■□□□ 1.04
PRPF40B-215ENST00000551418 MAML3Q96JK9 1138 aa21.53■■□□□ 1.04
PRPF40B-215ENST00000551418 ATP11BQ9Y2G3 1177 aa21.53■■□□□ 1.04
PRPF40B-215ENST00000551418 FAM83BQ5T0W9 1011 aa21.52■■□□□ 1.04
PRPF40B-215ENST00000551418 TSHZ3Q63HK5 1081 aa21.52■■□□□ 1.04
PRPF40B-215ENST00000551418 SLC39A5Q6ZMH5 540 aa21.52■■□□□ 1.04
PRPF40B-215ENST00000551418 FERMT2Q96AC1 680 aa21.52■■□□□ 1.04
PRPF40B-215ENST00000551418 STRBPQ96SI9 672 aaKnown RBP21.52■■□□□ 1.04
PRPF40B-215ENST00000551418 NUP88Q99567 741 aaPredicted RBP21.52■■□□□ 1.04
PRPF40B-215ENST00000551418 LRRCC1Q9C099 1032 aa21.52■■□□□ 1.04
PRPF40B-215ENST00000551418 LTBP2Q14767 1821 aa21.52■■□□□ 1.04
PRPF40B-215ENST00000551418 DLL1O00548 723 aa21.51■■□□□ 1.03
PRPF40B-215ENST00000551418 RAD21O60216 631 aa21.51■■□□□ 1.03
PRPF40B-215ENST00000551418 FCER1AP12319 257 aa21.51■■□□□ 1.03
PRPF40B-215ENST00000551418 TAL1P17542 331 aaPredicted RBP21.51■■□□□ 1.03
PRPF40B-215ENST00000551418 FAM47AQ5JRC9 791 aa21.51■■□□□ 1.03
PRPF40B-215ENST00000551418 ABRAQ8N0Z2 381 aa21.51■■□□□ 1.03
PRPF40B-215ENST00000551418 ARRDC4Q8NCT1 418 aa21.51■■□□□ 1.03
PRPF40B-215ENST00000551418 SH2D4AQ9H788 454 aa21.51■■□□□ 1.03
PRPF40B-215ENST00000551418 KANSL2Q9H9L4 492 aa21.51■■□□□ 1.03
PRPF40B-215ENST00000551418 PLXNA1Q9UIW2 1896 aa21.51■■□□□ 1.03
PRPF40B-215ENST00000551418 GSG1L2A8MUP6 293 aa21.5■■□□□ 1.03
PRPF40B-215ENST00000551418 VWA5AO00534 786 aa21.5■■□□□ 1.03
PRPF40B-215ENST00000551418 ADCYAP1R1P41586 468 aa21.5■■□□□ 1.03
PRPF40B-215ENST00000551418 LRRC41Q15345 812 aa21.5■■□□□ 1.03
PRPF40B-215ENST00000551418 REPS2Q8NFH8 660 aa21.5■■□□□ 1.03
PRPF40B-215ENST00000551418 OSBP2Q969R2 916 aa21.5■■□□□ 1.03
PRPF40B-215ENST00000551418 MMP19Q99542 508 aa21.5■■□□□ 1.03
PRPF40B-215ENST00000551418 LBHD1Q9BQE6 289 aaPredicted RBP21.5■■□□□ 1.03
PRPF40B-215ENST00000551418 GREB1LQ9C091 1923 aaPredicted RBP21.5■■□□□ 1.03
PRPF40B-215ENST00000551418 RASA1P20936 1047 aa21.49■■□□□ 1.03
PRPF40B-215ENST00000551418 TRIM60Q495X7 471 aa21.49■■□□□ 1.03
PRPF40B-215ENST00000551418 SH3RF1Q7Z6J0 888 aa21.49■■□□□ 1.03
PRPF40B-215ENST00000551418 RIOX2Q8IUF8 465 aa21.49■■□□□ 1.03
PRPF40B-215ENST00000551418 ZNF214Q9UL59 606 aaPredicted RBP21.49■■□□□ 1.03
PRPF40B-215ENST00000551418 PPP1R9AQ9ULJ8 1098 aa21.49■■□□□ 1.03
PRPF40B-215ENST00000551418 LAMA2P24043 3122 aaKnown RBP21.48■■□□□ 1.03
PRPF40B-215ENST00000551418 KBTBD13C9JR72 458 aa21.48■■□□□ 1.03
PRPF40B-215ENST00000551418 SLC25A27O95847 323 aa21.48■■□□□ 1.03
PRPF40B-215ENST00000551418 STAT3P40763 770 aa21.48■■□□□ 1.03
PRPF40B-215ENST00000551418 ZNF792Q3KQV3 632 aa21.48■■□□□ 1.03
PRPF40B-215ENST00000551418 AMOTL1Q8IY63 956 aa21.48■■□□□ 1.03
PRPF40B-215ENST00000551418 LENG1Q96BZ8 264 aaPredicted RBP21.48■■□□□ 1.03
PRPF40B-215ENST00000551418 DDRGK1Q96HY6 314 aa21.48■■□□□ 1.03
PRPF40B-215ENST00000551418 ECHDC1Q9NTX5 307 aa21.48■■□□□ 1.03
PRPF40B-215ENST00000551418 SLC5A4Q9NY91 659 aa21.48■■□□□ 1.03
PRPF40B-215ENST00000551418 STXBP5LQ9Y2K9 1186 aa21.48■■□□□ 1.03
PRPF40B-215ENST00000551418 A0A0C4DFX4 3053 aa21.48■■□□□ 1.03
PRPF40B-215ENST00000551418 MINDY4BA8MYZ0 360 aa21.47■■□□□ 1.03
PRPF40B-215ENST00000551418 POTEB2H3BUK9 544 aa21.47■■□□□ 1.03
PRPF40B-215ENST00000551418 SHHQ15465 462 aa21.47■■□□□ 1.03
PRPF40B-215ENST00000551418 C9orf50Q5SZB4 431 aa21.47■■□□□ 1.03
PRPF40B-215ENST00000551418 ZSCAN25Q6NSZ9 544 aa21.47■■□□□ 1.03
PRPF40B-215ENST00000551418 FAM161BQ96MY7 647 aa21.47■■□□□ 1.03
PRPF40B-215ENST00000551418 PRDM5Q9NQX1 630 aaPredicted RBP21.47■■□□□ 1.03
PRPF40B-215ENST00000551418 TRIM43BA6NCK2 446 aa21.46■■□□□ 1.03
PRPF40B-215ENST00000551418 PGK1P00558 417 aa21.46■■□□□ 1.03
PRPF40B-215ENST00000551418 SNX17Q15036 470 aa21.46■■□□□ 1.03
PRPF40B-215ENST00000551418 SBK1Q52WX2 424 aa21.46■■□□□ 1.03
PRPF40B-215ENST00000551418 KBTBD3Q8NAB2 608 aa21.46■■□□□ 1.03
PRPF40B-215ENST00000551418 TRIM43Q96BQ3 446 aaPredicted RBP21.46■■□□□ 1.03
PRPF40B-215ENST00000551418 CHMP4BQ9H444 224 aaKnown RBP21.46■■□□□ 1.03
PRPF40B-215ENST00000551418 EPB41L4AQ9HCS5 686 aaPredicted RBP21.46■■□□□ 1.03
PRPF40B-215ENST00000551418 GOPCQ9HD26 462 aa21.46■■□□□ 1.03
PRPF40B-215ENST00000551418 ARPP21Q9UBL0 812 aaPredicted RBP21.46■■□□□ 1.03
PRPF40B-215ENST00000551418 RIPK3Q9Y572 518 aa21.46■■□□□ 1.03
PRPF40B-215ENST00000551418 M0R2C6 588 aa21.45■■□□□ 1.02
PRPF40B-215ENST00000551418 BADQ92934 168 aa21.45■■□□□ 1.02
PRPF40B-215ENST00000551418 GUCD1Q96NT3 240 aa21.45■■□□□ 1.02
PRPF40B-215ENST00000551418 TINF2Q9BSI4 451 aa21.45■■□□□ 1.02
PRPF40B-215ENST00000551418 DCTPP1Q9H773 170 aa21.45■■□□□ 1.02
PRPF40B-215ENST00000551418 XPNPEP3Q9NQH7 507 aa21.45■■□□□ 1.02
PRPF40B-215ENST00000551418 PDLIM7Q9NR12 457 aa21.45■■□□□ 1.02
PRPF40B-215ENST00000551418 PRKAG2Q9UGJ0 569 aa21.45■■□□□ 1.02
PRPF40B-215ENST00000551418 F5H6K3 240 aa21.44■■□□□ 1.02
PRPF40B-215ENST00000551418 PRDM1O75626 825 aa21.44■■□□□ 1.02
PRPF40B-215ENST00000551418 NDUFB10O96000 172 aa21.44■■□□□ 1.02
PRPF40B-215ENST00000551418 ZNF865P0CJ78 1059 aaPredicted RBP21.44■■□□□ 1.02
PRPF40B-215ENST00000551418 ITGB8P26012 769 aa21.44■■□□□ 1.02
PRPF40B-215ENST00000551418 KLRC3Q07444 240 aa21.44■■□□□ 1.02
PRPF40B-215ENST00000551418 KCTD2Q14681 263 aa21.44■■□□□ 1.02
PRPF40B-215ENST00000551418 MYH4Q9Y623 1939 aa21.43■■□□□ 1.02
PRPF40B-215ENST00000551418 IGKV6D-41A0A0C4DH26 115 aa21.43■■□□□ 1.02
PRPF40B-215ENST00000551418 RNF113AO15541 343 aaKnown RBP21.43■■□□□ 1.02
PRPF40B-215ENST00000551418 SLC4A3P48751 1232 aa21.43■■□□□ 1.02
PRPF40B-215ENST00000551418 TLE2Q04725 743 aa21.43■■□□□ 1.02
PRPF40B-215ENST00000551418 APPBP2Q92624 585 aa21.43■■□□□ 1.02
PRPF40B-215ENST00000551418 SLF1Q9BQI6 1058 aa21.43■■□□□ 1.02
PRPF40B-215ENST00000551418 MKNK2Q9HBH9 465 aa21.43■■□□□ 1.02
PRPF40B-215ENST00000551418 NYAP2Q9P242 653 aa21.43■■□□□ 1.02
PRPF40B-215ENST00000551418 CLIP2Q9UDT6 1046 aa21.43■■□□□ 1.02
PRPF40B-215ENST00000551418 PHF24Q9UPV7 400 aa21.43■■□□□ 1.02
PRPF40B-215ENST00000551418 GPAA1O43292 621 aa21.42■■□□□ 1.02
PRPF40B-215ENST00000551418 RARBP10826 455 aa21.42■■□□□ 1.02
PRPF40B-215ENST00000551418 IRX5P78411 483 aaPredicted RBP21.42■■□□□ 1.02
PRPF40B-215ENST00000551418 SEC62Q99442 399 aaKnown RBP21.42■■□□□ 1.02
PRPF40B-215ENST00000551418 DIS3Q9Y2L1 958 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms