RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 SIPA1L1O43166 1804 aa14.48□□□□□ -0.09
CACNB3-217ENST00000550483 LBX1P52954 281 aa14.47□□□□□ -0.09
CACNB3-217ENST00000550483 FOSBP53539 338 aa14.47□□□□□ -0.09
CACNB3-217ENST00000550483 KIF4BQ2VIQ3 1234 aa14.47□□□□□ -0.09
CACNB3-217ENST00000550483 CHADLQ6NUI6 762 aa14.47□□□□□ -0.09
CACNB3-217ENST00000550483 TEX2Q8IWB9 1127 aa14.47□□□□□ -0.09
CACNB3-217ENST00000550483 CCDC82Q8N4S0 544 aa14.47□□□□□ -0.09
CACNB3-217ENST00000550483 GPT2Q8TD30 523 aa14.47□□□□□ -0.09
CACNB3-217ENST00000550483 RIOX1Q9H6W3 641 aa14.47□□□□□ -0.09
CACNB3-217ENST00000550483 ARHGEF10LQ9HCE6 1279 aa14.47□□□□□ -0.09
CACNB3-217ENST00000550483 PRDM10Q9NQV6 1147 aa14.47□□□□□ -0.09
CACNB3-217ENST00000550483 NOL7Q9UMY1 257 aaKnown RBP14.47□□□□□ -0.09
CACNB3-217ENST00000550483 GJA3Q9Y6H8 435 aa14.47□□□□□ -0.09
CACNB3-217ENST00000550483 DTNBO60941 627 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 PPFIA3O75145 1194 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 PPP6R2O75170 966 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 GUCY1A2P33402 732 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 TRAPPC10P48553 1259 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 VEGFBP49765 207 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 ZNF543Q08ER8 600 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 TRAF1Q13077 416 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 STK38Q15208 465 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 ANO1Q5XXA6 986 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 DCAF15Q66K64 600 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 OTUD7BQ6GQQ9 843 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 PPP1R18Q6NYC8 613 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 DAGLBQ8NCG7 672 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 GMCL1Q96IK5 515 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 AIFM3Q96NN9 605 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 USP28Q96RU2 1077 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 GDPD2Q9HCC8 539 aa14.46□□□□□ -0.09
CACNB3-217ENST00000550483 DICER1Q9UPY3 1922 aaKnown RBP14.45□□□□□ -0.1
CACNB3-217ENST00000550483 MYH15Q9Y2K3 1946 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 A0A1W2PQ27 194 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 A0A1W2PQ64 194 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 A0A1W2PQD8 194 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 ESYT2A0FGR8 921 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 ASNSP08243 561 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 GNA11P29992 359 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 CTCFP49711 727 aaPredicted RBP14.45□□□□□ -0.1
CACNB3-217ENST00000550483 NLRP5P59047 1200 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 ZNF445P59923 1031 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 SF3A1Q15459 793 aaKnown RBP14.45□□□□□ -0.1
CACNB3-217ENST00000550483 NBPF9Q3BBW0 867 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 CCDC183Q5T5S1 534 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 CAVIN1Q6NZI2 390 aaKnown RBP14.45□□□□□ -0.1
CACNB3-217ENST00000550483 FAM173BQ6P4H8 233 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 CMTR1Q8N1G2 835 aaKnown RBP14.45□□□□□ -0.1
CACNB3-217ENST00000550483 LINC00301Q8NCQ3 95 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 BICD2Q8TD16 824 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 GLT8D2Q9H1C3 349 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 DDX19AQ9NUU7 478 aaKnown RBP14.45□□□□□ -0.1
CACNB3-217ENST00000550483 BARHL2Q9NY43 387 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 GPRC5DQ9NZD1 345 aa14.45□□□□□ -0.1
CACNB3-217ENST00000550483 TFIP11Q9UBB9 837 aaKnown RBP14.45□□□□□ -0.1
CACNB3-217ENST00000550483 PITPNM2Q9BZ72 1349 aa14.44□□□□□ -0.1
CACNB3-217ENST00000550483 ZNF541Q9H0D2 1346 aa14.44□□□□□ -0.1
CACNB3-217ENST00000550483 KIF28PB7ZC32 967 aa14.44□□□□□ -0.1
CACNB3-217ENST00000550483 DDNO94850 711 aaPredicted RBP14.44□□□□□ -0.1
CACNB3-217ENST00000550483 EEF2P13639 858 aaKnown RBP14.44□□□□□ -0.1
CACNB3-217ENST00000550483 LMOD1P29536 600 aaPredicted RBP14.44□□□□□ -0.1
CACNB3-217ENST00000550483 RASA3Q14644 834 aa14.44□□□□□ -0.1
CACNB3-217ENST00000550483 L1TD1Q5T7N2 865 aaKnown RBP14.44□□□□□ -0.1
CACNB3-217ENST00000550483 DPY19L2Q6NUT2 758 aa14.44□□□□□ -0.1
CACNB3-217ENST00000550483 LRRC47Q8N1G4 583 aaKnown RBP14.44□□□□□ -0.1
CACNB3-217ENST00000550483 STAG2Q8N3U4 1231 aa14.44□□□□□ -0.1
CACNB3-217ENST00000550483 ABHD8Q96I13 439 aa14.44□□□□□ -0.1
CACNB3-217ENST00000550483 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.44□□□□□ -0.1
CACNB3-217ENST00000550483 VPS54Q9P1Q0 977 aa14.44□□□□□ -0.1
CACNB3-217ENST00000550483 PGAP2Q9UHJ9 254 aa14.44□□□□□ -0.1
CACNB3-217ENST00000550483 USP17L5A8MUK1 530 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 BTBD18B2RXH4 712 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 SPTLC2O15270 562 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 GADD45BO75293 160 aaPredicted RBP14.43□□□□□ -0.1
CACNB3-217ENST00000550483 GH2P01242 217 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 CAP2P40123 477 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 SLC1A4P43007 532 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 SEPT2Q15019 361 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 SLC39A14Q15043 492 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 SLFN13Q68D06 897 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 ADALQ6DHV7 355 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 USP17L2Q6R6M4 530 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 CHAMP1Q96JM3 812 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 TMEM39BQ9GZU3 492 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 GOPCQ9HD26 462 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 C6orf50Q9HD87 102 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 ZBTB21Q9ULJ3 1066 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 PCDHA4Q9UN74 947 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 KCNJ14Q9UNX9 436 aa14.43□□□□□ -0.1
CACNB3-217ENST00000550483 PNMA6FA0A0J9YX94 578 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 CYTH3O43739 400 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 ME1P48163 572 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 ATP2B2Q01814 1243 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 ORC2Q13416 577 aaPredicted RBP14.42□□□□□ -0.1
CACNB3-217ENST00000550483 CCDC96Q2M329 555 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 ZSCAN23Q3MJ62 389 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 MCTP2Q6DN12 878 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 CCDC73Q6ZRK6 1079 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 BLIDQ8IZY5 108 aa14.42□□□□□ -0.1
CACNB3-217ENST00000550483 ZMYND12Q9H0C1 365 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms