RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 KCTD2Q14681 263 aa27.66■■■□□ 2.02
SMARCD1-209ENST00000550477 CLEC10AQ8IUN9 316 aa27.66■■■□□ 2.02
SMARCD1-209ENST00000550477 MAML3Q96JK9 1138 aa27.66■■■□□ 2.02
SMARCD1-209ENST00000550477 MMP19Q99542 508 aa27.66■■■□□ 2.02
SMARCD1-209ENST00000550477 MYH7P12883 1935 aa27.66■■■□□ 2.02
SMARCD1-209ENST00000550477 RTP1P59025 263 aa27.65■■■□□ 2.02
SMARCD1-209ENST00000550477 TMEM132BQ14DG7 1078 aa27.65■■■□□ 2.02
SMARCD1-209ENST00000550477 LRRFIP1Q32MZ4 808 aaKnown RBP27.65■■■□□ 2.02
SMARCD1-209ENST00000550477 PUS7LQ9H0K6 701 aaKnown RBP27.65■■■□□ 2.02
SMARCD1-209ENST00000550477 ZNF287Q9HBT7 754 aa27.65■■■□□ 2.02
SMARCD1-209ENST00000550477 ATP11BQ9Y2G3 1177 aa27.65■■■□□ 2.02
SMARCD1-209ENST00000550477 STAT3P40763 770 aa27.64■■■□□ 2.02
SMARCD1-209ENST00000550477 GIMAP6Q6P9H5 292 aa27.64■■■□□ 2.02
SMARCD1-209ENST00000550477 SLC39A5Q6ZMH5 540 aa27.64■■■□□ 2.02
SMARCD1-209ENST00000550477 RIOX2Q8IUF8 465 aa27.64■■■□□ 2.02
SMARCD1-209ENST00000550477 ADAMTS5Q9UNA0 930 aa27.64■■■□□ 2.02
SMARCD1-209ENST00000550477 DIS3Q9Y2L1 958 aaKnown RBP27.64■■■□□ 2.02
SMARCD1-209ENST00000550477 RLFQ13129 1914 aa27.64■■■□□ 2.02
SMARCD1-209ENST00000550477 SBK1Q52WX2 424 aa27.63■■■□□ 2.01
SMARCD1-209ENST00000550477 PPP1R9AQ9ULJ8 1098 aa27.63■■■□□ 2.01
SMARCD1-209ENST00000550477 ZNFX1Q9P2E3 1918 aaKnown RBP27.63■■■□□ 2.01
SMARCD1-209ENST00000550477 A0A0G2JMZ2 1700 aa27.62■■■□□ 2.01
SMARCD1-209ENST00000550477 ZFYP08048 801 aaPredicted RBP27.62■■■□□ 2.01
SMARCD1-209ENST00000550477 RARBP10826 455 aa27.62■■■□□ 2.01
SMARCD1-209ENST00000550477 PRAMEF19Q5SWL8 479 aa27.62■■■□□ 2.01
SMARCD1-209ENST00000550477 ANO1Q5XXA6 986 aa27.62■■■□□ 2.01
SMARCD1-209ENST00000550477 STRBPQ96SI9 672 aaKnown RBP27.62■■■□□ 2.01
SMARCD1-209ENST00000550477 CTDP1Q9Y5B0 961 aaPredicted RBP27.62■■■□□ 2.01
SMARCD1-209ENST00000550477 VWA5AO00534 786 aa27.61■■■□□ 2.01
SMARCD1-209ENST00000550477 SMARCA5O60264 1052 aaPredicted RBP27.61■■■□□ 2.01
SMARCD1-209ENST00000550477 GNAT2P19087 354 aa27.61■■■□□ 2.01
SMARCD1-209ENST00000550477 STXBP5LQ9Y2K9 1186 aa27.61■■■□□ 2.01
SMARCD1-209ENST00000550477 MINDY4BA8MYZ0 360 aa27.6■■■□□ 2.01
SMARCD1-209ENST00000550477 FAM83BQ5T0W9 1011 aa27.6■■■□□ 2.01
SMARCD1-209ENST00000550477 Q7L0L9 218 aa27.6■■■□□ 2.01
SMARCD1-209ENST00000550477 RNF180Q86T96 592 aa27.6■■■□□ 2.01
SMARCD1-209ENST00000550477 KBTBD3Q8NAB2 608 aa27.6■■■□□ 2.01
SMARCD1-209ENST00000550477 MTMR10Q9NXD2 777 aa27.6■■■□□ 2.01
SMARCD1-209ENST00000550477 DLL1O00548 723 aa27.59■■■□□ 2.01
SMARCD1-209ENST00000550477 LRRC41Q15345 812 aa27.59■■■□□ 2.01
SMARCD1-209ENST00000550477 ZNF444Q8N0Y2 327 aaPredicted RBP27.59■■■□□ 2.01
SMARCD1-209ENST00000550477 APPBP2Q92624 585 aa27.59■■■□□ 2.01
SMARCD1-209ENST00000550477 SLF1Q9BQI6 1058 aa27.59■■■□□ 2.01
SMARCD1-209ENST00000550477 TINF2Q9BSI4 451 aa27.59■■■□□ 2.01
SMARCD1-209ENST00000550477 PRDM5Q9NQX1 630 aaPredicted RBP27.59■■■□□ 2.01
SMARCD1-209ENST00000550477 FBXO28Q9NVF7 368 aa27.59■■■□□ 2.01
SMARCD1-209ENST00000550477 NYAP2Q9P242 653 aa27.59■■■□□ 2.01
SMARCD1-209ENST00000550477 CNPY2Q9Y2B0 182 aa27.59■■■□□ 2.01
SMARCD1-209ENST00000550477 CHGBP05060 677 aa27.58■■■□□ 2.01
SMARCD1-209ENST00000550477 APPP05067 770 aa27.58■■■□□ 2.01
SMARCD1-209ENST00000550477 ADCYAP1R1P41586 468 aa27.58■■■□□ 2.01
SMARCD1-209ENST00000550477 XPNPEP3Q9NQH7 507 aa27.58■■■□□ 2.01
SMARCD1-209ENST00000550477 LAMA3Q16787 3333 aa27.58■■■□□ 2.01
SMARCD1-209ENST00000550477 SMIM22K7EJ46 135 aa27.57■■■□□ 2
SMARCD1-209ENST00000550477 RNF113AO15541 343 aaKnown RBP27.57■■■□□ 2
SMARCD1-209ENST00000550477 PGK2P07205 417 aa27.57■■■□□ 2
SMARCD1-209ENST00000550477 TDO2P48775 406 aa27.57■■■□□ 2
SMARCD1-209ENST00000550477 C1orf53Q5VUE5 145 aa27.57■■■□□ 2
SMARCD1-209ENST00000550477 PRPF38AQ8NAV1 312 aaKnown RBP27.57■■■□□ 2
SMARCD1-209ENST00000550477 DDX11Q96FC9 970 aa27.57■■■□□ 2
SMARCD1-209ENST00000550477 GSG1L2A8MUP6 293 aa27.56■■■□□ 2
SMARCD1-209ENST00000550477 FAM47AQ5JRC9 791 aa27.56■■■□□ 2
SMARCD1-209ENST00000550477 FAM109BQ6ICB4 259 aaPredicted RBP27.56■■■□□ 2
SMARCD1-209ENST00000550477 STK11IPQ8N1F8 1099 aa27.56■■■□□ 2
SMARCD1-209ENST00000550477 MSL3Q8N5Y2 521 aaKnown RBP27.56■■■□□ 2
SMARCD1-209ENST00000550477 TEX13BQ9BXU2 312 aa27.56■■■□□ 2
SMARCD1-209ENST00000550477 DCTPP1Q9H773 170 aa27.56■■■□□ 2
SMARCD1-209ENST00000550477 ZNF214Q9UL59 606 aaPredicted RBP27.56■■■□□ 2
SMARCD1-209ENST00000550477 COL11A1P12107 1806 aaPredicted RBP27.55■■■□□ 2
SMARCD1-209ENST00000550477 PARP14Q460N5 1801 aa27.55■■■□□ 2
SMARCD1-209ENST00000550477 F5H6K3 240 aa27.55■■■□□ 2
SMARCD1-209ENST00000550477 ZBED4O75132 1171 aa27.55■■■□□ 2
SMARCD1-209ENST00000550477 AKR1A1P14550 325 aa27.55■■■□□ 2
SMARCD1-209ENST00000550477 RASA1P20936 1047 aa27.55■■■□□ 2
SMARCD1-209ENST00000550477 KLRC3Q07444 240 aa27.55■■■□□ 2
SMARCD1-209ENST00000550477 SNX17Q15036 470 aa27.55■■■□□ 2
SMARCD1-209ENST00000550477 ZNF792Q3KQV3 632 aa27.55■■■□□ 2
SMARCD1-209ENST00000550477 TRIM60Q495X7 471 aa27.55■■■□□ 2
SMARCD1-209ENST00000550477 FERMT2Q96AC1 680 aa27.55■■■□□ 2
SMARCD1-209ENST00000550477 NACAP1Q9BZK3 213 aa27.55■■■□□ 2
SMARCD1-209ENST00000550477 SMCHD1A6NHR9 2005 aa27.55■■■□□ 2
SMARCD1-209ENST00000550477 OSBP2Q969R2 916 aa27.54■■■□□ 2
SMARCD1-209ENST00000550477 CLIP2Q9UDT6 1046 aa27.54■■■□□ 2
SMARCD1-209ENST00000550477 TACC3Q9Y6A5 838 aa27.54■■■□□ 2
SMARCD1-209ENST00000550477 ERC2O15083 957 aa27.53■■■□□ 2
SMARCD1-209ENST00000550477 SLC3A2P08195 630 aaKnown RBP27.53■■■□□ 2
SMARCD1-209ENST00000550477 C20orf194Q5TEA3 1177 aa27.53■■■□□ 2
SMARCD1-209ENST00000550477 SNRNP48Q6IEG0 339 aaKnown RBP27.53■■■□□ 2
SMARCD1-209ENST00000550477 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.53■■■□□ 2
SMARCD1-209ENST00000550477 SYNPO2Q9UMS6 1093 aa27.53■■■□□ 2
SMARCD1-209ENST00000550477 PHF24Q9UPV7 400 aa27.53■■■□□ 2
SMARCD1-209ENST00000550477 GPAA1O43292 621 aa27.52■■■□□ 2
SMARCD1-209ENST00000550477 ZNF697Q5TEC3 545 aa27.52■■■□□ 2
SMARCD1-209ENST00000550477 REPS2Q8NFH8 660 aa27.52■■■□□ 2
SMARCD1-209ENST00000550477 ROBO3Q96MS0 1386 aa27.51■■□□□ 1.99
SMARCD1-209ENST00000550477 PATL2C9JE40 543 aaKnown RBP27.51■■□□□ 1.99
SMARCD1-209ENST00000550477 POTEB2H3BUK9 544 aa27.51■■□□□ 1.99
SMARCD1-209ENST00000550477 NDUFB10O96000 172 aa27.51■■□□□ 1.99
SMARCD1-209ENST00000550477 SLC4A3P48751 1232 aa27.51■■□□□ 1.99
SMARCD1-209ENST00000550477 PDE4BQ07343 736 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms