RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 VEGFAP15692 232 aaPredicted RBP14.02□□□□□ -0.17
CACNB3-213ENST00000550064 ECE1P42892 770 aa14.02□□□□□ -0.17
CACNB3-213ENST00000550064 DNM1Q05193 864 aaKnown RBP14.02□□□□□ -0.17
CACNB3-213ENST00000550064 KLRC3Q07444 240 aa14.02□□□□□ -0.17
CACNB3-213ENST00000550064 PFKFB3Q16875 520 aaPredicted RBP14.02□□□□□ -0.17
CACNB3-213ENST00000550064 CCDC96Q2M329 555 aa14.02□□□□□ -0.17
CACNB3-213ENST00000550064 SUPT20HL1Q3ZLR7 823 aa14.02□□□□□ -0.17
CACNB3-213ENST00000550064 SULF1Q8IWU6 871 aa14.02□□□□□ -0.17
CACNB3-213ENST00000550064 GMCL1P1Q8NEA9 526 aa14.02□□□□□ -0.17
CACNB3-213ENST00000550064 ZC3H15Q8WU90 426 aaKnown RBP14.02□□□□□ -0.17
CACNB3-213ENST00000550064 SHISA4Q96DD7 197 aa14.02□□□□□ -0.17
CACNB3-213ENST00000550064 ZNF112Q9UJU3 913 aa14.02□□□□□ -0.17
CACNB3-213ENST00000550064 SYNPO2Q9UMS6 1093 aa14.02□□□□□ -0.17
CACNB3-213ENST00000550064 KCNJ14Q9UNX9 436 aa14.02□□□□□ -0.17
CACNB3-213ENST00000550064 SSC5DA1L4H1 1573 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 DDX11L8A8MPP1 907 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 KIF28PB7ZC32 967 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 GOLGA6L22H0YM25 854 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 NDUFB10O96000 172 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 INPP5BP32019 993 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 KIF23Q02241 960 aaPredicted RBP14.01□□□□□ -0.17
CACNB3-213ENST00000550064 GPATCH4Q5T3I0 446 aaKnown RBP14.01□□□□□ -0.17
CACNB3-213ENST00000550064 TTBK2Q6IQ55 1244 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 KCTD1Q719H9 257 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 CCDC84Q86UT8 332 aaPredicted RBP14.01□□□□□ -0.17
CACNB3-213ENST00000550064 USP48Q86UV5 1035 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 GMCL1Q96IK5 515 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 RIOX1Q9H6W3 641 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 VAT1LQ9HCJ6 419 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 VPS54Q9P1Q0 977 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 FZD1Q9UP38 647 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 CNPY2Q9Y2B0 182 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 TMX2Q9Y320 296 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 MYH15Q9Y2K3 1946 aa14.01□□□□□ -0.17
CACNB3-213ENST00000550064 MMP1P03956 469 aa14□□□□□ -0.17
CACNB3-213ENST00000550064 XBP1P17861 261 aa14□□□□□ -0.17
CACNB3-213ENST00000550064 SLC1A4P43007 532 aa14□□□□□ -0.17
CACNB3-213ENST00000550064 EAPPQ56P03 285 aaPredicted RBP14□□□□□ -0.17
CACNB3-213ENST00000550064 KIAA1755Q5JYT7 1200 aa14□□□□□ -0.17
CACNB3-213ENST00000550064 KRT26Q7Z3Y9 468 aa14□□□□□ -0.17
CACNB3-213ENST00000550064 RRP36Q96EU6 259 aaKnown RBP14□□□□□ -0.17
CACNB3-213ENST00000550064 PIGSQ96S52 555 aa14□□□□□ -0.17
CACNB3-213ENST00000550064 GLIS2Q9BZE0 524 aaPredicted RBP14□□□□□ -0.17
CACNB3-213ENST00000550064 GOPCQ9HD26 462 aa14□□□□□ -0.17
CACNB3-213ENST00000550064 ISY1Q9ULR0 285 aaKnown RBP14□□□□□ -0.17
CACNB3-213ENST00000550064 DOCK1Q14185 1865 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 PRPF40AO75400 957 aaKnown RBP13.99□□□□□ -0.17
CACNB3-213ENST00000550064 USP2O75604 605 aaPredicted RBP13.99□□□□□ -0.17
CACNB3-213ENST00000550064 BMP3P12645 472 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 NCLP19338 710 aaKnown RBP13.99□□□□□ -0.17
CACNB3-213ENST00000550064 SLC16A2P36021 539 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 SAFBQ15424 915 aaKnown RBP eCLIP13.99□□□□□ -0.17
CACNB3-213ENST00000550064 BRAPQ7Z569 592 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 PNMA8AQ86V59 439 aaPredicted RBP13.99□□□□□ -0.17
CACNB3-213ENST00000550064 SCYL3Q8IZE3 742 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 ZKSCAN4Q969J2 545 aaPredicted RBP13.99□□□□□ -0.17
CACNB3-213ENST00000550064 KLRG1Q96E93 195 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 WRNIP1Q96S55 665 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 NUP88Q99567 741 aaPredicted RBP13.99□□□□□ -0.17
CACNB3-213ENST00000550064 PHF20Q9BVI0 1012 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 SH2D4AQ9H788 454 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 VCPKMTQ9H867 229 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 JMJD4Q9H9V9 463 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 GDPD2Q9HCC8 539 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 LMBRD1Q9NUN5 540 aa13.99□□□□□ -0.17
CACNB3-213ENST00000550064 TFIP11Q9UBB9 837 aaKnown RBP13.99□□□□□ -0.17
CACNB3-213ENST00000550064 BTBD18B2RXH4 712 aa13.98□□□□□ -0.17
CACNB3-213ENST00000550064 PTMSP20962 102 aa13.98□□□□□ -0.17
CACNB3-213ENST00000550064 U2AF2P26368 475 aaKnown RBP eCLIP13.98□□□□□ -0.17
CACNB3-213ENST00000550064 KRT85P78386 507 aa13.98□□□□□ -0.17
CACNB3-213ENST00000550064 GNL2Q13823 731 aaKnown RBP13.98□□□□□ -0.17
CACNB3-213ENST00000550064 PRKG1Q13976 671 aa13.98□□□□□ -0.17
CACNB3-213ENST00000550064 WWC2Q6AWC2 1192 aa13.98□□□□□ -0.17
CACNB3-213ENST00000550064 HEATR3Q7Z4Q2 680 aa13.98□□□□□ -0.17
CACNB3-213ENST00000550064 HOMER1Q86YM7 354 aa13.98□□□□□ -0.17
CACNB3-213ENST00000550064 DIS3L2Q8IYB7 885 aaKnown RBP13.98□□□□□ -0.17
CACNB3-213ENST00000550064 ADGRF4Q8IZF3 695 aa13.98□□□□□ -0.17
CACNB3-213ENST00000550064 SPICE1Q8N0Z3 855 aa13.98□□□□□ -0.17
CACNB3-213ENST00000550064 OXER1Q8TDS5 423 aa13.98□□□□□ -0.17
CACNB3-213ENST00000550064 GPKOWQ92917 476 aaPredicted RBP eCLIP13.98□□□□□ -0.17
CACNB3-213ENST00000550064 SH3GLB2Q9NR46 395 aa13.98□□□□□ -0.17
CACNB3-213ENST00000550064 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
CACNB3-213ENST00000550064 USP17L10C9JJH3 530 aa13.97□□□□□ -0.17
CACNB3-213ENST00000550064 STXBP3O00186 592 aa13.97□□□□□ -0.17
CACNB3-213ENST00000550064 FIBPO43427 364 aa13.97□□□□□ -0.17
CACNB3-213ENST00000550064 NLRP5P59047 1200 aa13.97□□□□□ -0.17
CACNB3-213ENST00000550064 ZYXQ15942 572 aaKnown RBP13.97□□□□□ -0.17
CACNB3-213ENST00000550064 TMEM87AQ8NBN3 555 aa13.97□□□□□ -0.17
CACNB3-213ENST00000550064 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.97□□□□□ -0.17
CACNB3-213ENST00000550064 MTMR8Q96EF0 704 aa13.97□□□□□ -0.17
CACNB3-213ENST00000550064 CDCA5Q96FF9 252 aa13.97□□□□□ -0.17
CACNB3-213ENST00000550064 ZNF396Q96N95 335 aaPredicted RBP13.97□□□□□ -0.17
CACNB3-213ENST00000550064 FOXP1Q9H334 677 aaPredicted RBP13.97□□□□□ -0.17
CACNB3-213ENST00000550064 BARHL2Q9NY43 387 aa13.97□□□□□ -0.17
CACNB3-213ENST00000550064 SEC63Q9UGP8 760 aaKnown RBP13.97□□□□□ -0.17
CACNB3-213ENST00000550064 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
CACNB3-213ENST00000550064 PNMA6FA0A0J9YX94 578 aa13.96□□□□□ -0.17
CACNB3-213ENST00000550064 TMEM232C9JQI7 657 aa13.96□□□□□ -0.17
CACNB3-213ENST00000550064 PTPRAP18433 802 aa13.96□□□□□ -0.17
CACNB3-213ENST00000550064 KRT2P35908 639 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms