RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 FOXP2O15409 715 aa23.28■■□□□ 1.32
ATF1-202ENST00000549612 PRDM1O75626 825 aa23.28■■□□□ 1.32
ATF1-202ENST00000549612 ADORA2AP29274 412 aa23.28■■□□□ 1.32
ATF1-202ENST00000549612 PLS1Q14651 629 aa23.28■■□□□ 1.32
ATF1-202ENST00000549612 TMEM132BQ14DG7 1078 aa23.28■■□□□ 1.32
ATF1-202ENST00000549612 FAM83BQ5T0W9 1011 aa23.28■■□□□ 1.32
ATF1-202ENST00000549612 SMC5Q8IY18 1101 aa23.28■■□□□ 1.32
ATF1-202ENST00000549612 ZNF444Q8N0Y2 327 aaPredicted RBP23.28■■□□□ 1.32
ATF1-202ENST00000549612 ABRAQ8N0Z2 381 aa23.28■■□□□ 1.32
ATF1-202ENST00000549612 COLQQ9Y215 455 aaPredicted RBP23.28■■□□□ 1.32
ATF1-202ENST00000549612 VWA5AO00534 786 aa23.27■■□□□ 1.32
ATF1-202ENST00000549612 PDE4BQ07343 736 aa23.27■■□□□ 1.32
ATF1-202ENST00000549612 PPARAQ07869 468 aa23.27■■□□□ 1.32
ATF1-202ENST00000549612 LHX8Q68G74 356 aa23.27■■□□□ 1.32
ATF1-202ENST00000549612 SAMD1Q6SPF0 538 aaPredicted RBP23.27■■□□□ 1.32
ATF1-202ENST00000549612 TICAM2Q86XR7 235 aa23.27■■□□□ 1.32
ATF1-202ENST00000549612 NBPF3Q9H094 633 aa23.27■■□□□ 1.32
ATF1-202ENST00000549612 RWDD1Q9H446 243 aaPredicted RBP23.27■■□□□ 1.32
ATF1-202ENST00000549612 SYNPO2Q9UMS6 1093 aa23.27■■□□□ 1.32
ATF1-202ENST00000549612 F5H6K3 240 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 RAD21O60216 631 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 SLC25A27O95847 323 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 NDUFB10O96000 172 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 SLC3A2P08195 630 aaKnown RBP23.26■■□□□ 1.31
ATF1-202ENST00000549612 KLRC3Q07444 240 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 OLFML2BQ68BL8 750 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 CCDC129Q6ZRS4 1044 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 DPP9Q86TI2 863 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 NCAPG2Q86XI2 1143 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 MKL1Q969V6 931 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 CEP95Q96GE4 821 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 MTMR4Q9NYA4 1195 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 CLIP2Q9UDT6 1046 aa23.26■■□□□ 1.31
ATF1-202ENST00000549612 RANBP2P49792 3224 aaKnown RBP23.25■■□□□ 1.31
ATF1-202ENST00000549612 EVI5O60447 810 aa23.25■■□□□ 1.31
ATF1-202ENST00000549612 REPS2Q8NFH8 660 aa23.25■■□□□ 1.31
ATF1-202ENST00000549612 NEDD1Q8NHV4 660 aa23.25■■□□□ 1.31
ATF1-202ENST00000549612 NUP88Q99567 741 aaPredicted RBP23.25■■□□□ 1.31
ATF1-202ENST00000549612 LNPKQ9C0E8 428 aa23.25■■□□□ 1.31
ATF1-202ENST00000549612 HELLSQ9NRZ9 838 aa23.25■■□□□ 1.31
ATF1-202ENST00000549612 ZNF214Q9UL59 606 aaPredicted RBP23.25■■□□□ 1.31
ATF1-202ENST00000549612 COBLO75128 1261 aa23.24■■□□□ 1.31
ATF1-202ENST00000549612 CYP2C19P33261 490 aa23.24■■□□□ 1.31
ATF1-202ENST00000549612 RIOX2Q8IUF8 465 aa23.24■■□□□ 1.31
ATF1-202ENST00000549612 SLF1Q9BQI6 1058 aa23.24■■□□□ 1.31
ATF1-202ENST00000549612 C11orf49Q9H6J7 331 aa23.24■■□□□ 1.31
ATF1-202ENST00000549612 SLC5A4Q9NY91 659 aa23.24■■□□□ 1.31
ATF1-202ENST00000549612 TRIOBPQ9H2D6 2365 aa23.24■■□□□ 1.31
ATF1-202ENST00000549612 TTLL1O95922 423 aa23.23■■□□□ 1.31
ATF1-202ENST00000549612 TSPY3P0CV98 308 aa23.23■■□□□ 1.31
ATF1-202ENST00000549612 TSPY8P0CW00 308 aa23.23■■□□□ 1.31
ATF1-202ENST00000549612 FCER1AP12319 257 aa23.23■■□□□ 1.31
ATF1-202ENST00000549612 CHRDL2Q6WN34 429 aa23.23■■□□□ 1.31
ATF1-202ENST00000549612 EXOC6Q8TAG9 804 aa23.23■■□□□ 1.31
ATF1-202ENST00000549612 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.23■■□□□ 1.31
ATF1-202ENST00000549612 MSCO60682 206 aa23.22■■□□□ 1.31
ATF1-202ENST00000549612 COL6A1P12109 1028 aa23.22■■□□□ 1.31
ATF1-202ENST00000549612 CYBAP13498 195 aa23.22■■□□□ 1.31
ATF1-202ENST00000549612 COPB2P35606 906 aa23.22■■□□□ 1.31
ATF1-202ENST00000549612 STAT3P40763 770 aa23.22■■□□□ 1.31
ATF1-202ENST00000549612 VPS53Q5VIR6 699 aa23.22■■□□□ 1.31
ATF1-202ENST00000549612 GMCL1P1Q8NEA9 526 aa23.22■■□□□ 1.31
ATF1-202ENST00000549612 TRPV1Q8NER1 839 aa23.22■■□□□ 1.31
ATF1-202ENST00000549612 DDX20Q9UHI6 824 aaKnown RBP23.22■■□□□ 1.31
ATF1-202ENST00000549612 COL11A1P12107 1806 aaPredicted RBP23.22■■□□□ 1.31
ATF1-202ENST00000549612 ALPK3Q96L96 1907 aa23.21■■□□□ 1.31
ATF1-202ENST00000549612 IGHDP01880 384 aa23.21■■□□□ 1.31
ATF1-202ENST00000549612 TFAP4Q01664 338 aa23.21■■□□□ 1.31
ATF1-202ENST00000549612 ALX1Q15699 326 aa23.21■■□□□ 1.31
ATF1-202ENST00000549612 FAM47AQ5JRC9 791 aa23.21■■□□□ 1.31
ATF1-202ENST00000549612 CHD1LQ86WJ1 897 aa23.21■■□□□ 1.31
ATF1-202ENST00000549612 PRPF38AQ8NAV1 312 aaKnown RBP23.21■■□□□ 1.31
ATF1-202ENST00000549612 PRO3102Q9H379 93 aa23.21■■□□□ 1.31
ATF1-202ENST00000549612 ANAPC4Q9UJX5 808 aa23.21■■□□□ 1.31
ATF1-202ENST00000549612 PFASO15067 1338 aa23.21■■□□□ 1.31
ATF1-202ENST00000549612 A0A0D9SFI3 127 aa23.2■■□□□ 1.3
ATF1-202ENST00000549612 NUCB1Q02818 461 aa23.2■■□□□ 1.3
ATF1-202ENST00000549612 MCMDC2Q4G0Z9 681 aa23.2■■□□□ 1.3
ATF1-202ENST00000549612 B4GALNT3Q6L9W6 998 aa23.2■■□□□ 1.3
ATF1-202ENST00000549612 LRRC47Q8N1G4 583 aaKnown RBP23.2■■□□□ 1.3
ATF1-202ENST00000549612 MAML3Q96JK9 1138 aa23.2■■□□□ 1.3
ATF1-202ENST00000549612 FAM227BQ96M60 508 aa23.2■■□□□ 1.3
ATF1-202ENST00000549612 MMP19Q99542 508 aa23.2■■□□□ 1.3
ATF1-202ENST00000549612 TEX13BQ9BXU2 312 aa23.2■■□□□ 1.3
ATF1-202ENST00000549612 MYH4Q9Y623 1939 aa23.2■■□□□ 1.3
ATF1-202ENST00000549612 FXR1P51114 621 aaKnown RBP eCLIP23.19■■□□□ 1.3
ATF1-202ENST00000549612 CTDSPL2Q05D32 466 aa23.19■■□□□ 1.3
ATF1-202ENST00000549612 PPP4R3BQ5MIZ7 849 aa23.19■■□□□ 1.3
ATF1-202ENST00000549612 OSBPL3Q9H4L5 887 aa23.19■■□□□ 1.3
ATF1-202ENST00000549612 FRMPD3Q5JV73 1810 aa23.18■■□□□ 1.3
ATF1-202ENST00000549612 ATP2A1O14983 1001 aa23.18■■□□□ 1.3
ATF1-202ENST00000549612 CNGA1P29973 690 aa23.18■■□□□ 1.3
ATF1-202ENST00000549612 KCTD2Q14681 263 aa23.18■■□□□ 1.3
ATF1-202ENST00000549612 PLEKHM2Q8IWE5 1019 aa23.18■■□□□ 1.3
ATF1-202ENST00000549612 RBM27Q9P2N5 1060 aaKnown RBP23.18■■□□□ 1.3
ATF1-202ENST00000549612 FEM1BQ9UK73 627 aa23.18■■□□□ 1.3
ATF1-202ENST00000549612 ZMYM6O95789 1325 aa23.17■■□□□ 1.3
ATF1-202ENST00000549612 TRIM6-TRIM34B2RNG4 842 aa23.17■■□□□ 1.3
ATF1-202ENST00000549612 SLFN13Q68D06 897 aa23.17■■□□□ 1.3
ATF1-202ENST00000549612 SNRNP48Q6IEG0 339 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms