RNA–Protein interactions for RNA: ENST00000549455.1

ATXN2-218, Transcript of ataxin 2, humanhuman

TSL 4

Gene ATXN2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-218ENST00000549455 SLC4A4Q9Y6R1 1079 aa17.47■□□□□ 0.39
ATXN2-218ENST00000549455 USP17L12C9JPN9 530 aa17.46■□□□□ 0.39
ATXN2-218ENST00000549455 USP17L21D6R901 530 aa17.46■□□□□ 0.39
ATXN2-218ENST00000549455 FCER1AP12319 257 aa17.46■□□□□ 0.39
ATXN2-218ENST00000549455 EEF2P13639 858 aaKnown RBP17.46■□□□□ 0.39
ATXN2-218ENST00000549455 ATP5JP18859 108 aa17.46■□□□□ 0.39
ATXN2-218ENST00000549455 TMEM132BQ14DG7 1078 aa17.46■□□□□ 0.39
ATXN2-218ENST00000549455 SLC39A5Q6ZMH5 540 aa17.46■□□□□ 0.39
ATXN2-218ENST00000549455 ABRAQ8N0Z2 381 aa17.46■□□□□ 0.39
ATXN2-218ENST00000549455 HAUS7Q99871 368 aa17.46■□□□□ 0.39
ATXN2-218ENST00000549455 GREB1LQ9C091 1923 aaPredicted RBP17.46■□□□□ 0.39
ATXN2-218ENST00000549455 MYH4Q9Y623 1939 aa17.45■□□□□ 0.38
ATXN2-218ENST00000549455 TRIM60Q495X7 471 aa17.45■□□□□ 0.38
ATXN2-218ENST00000549455 FAM47AQ5JRC9 791 aa17.45■□□□□ 0.38
ATXN2-218ENST00000549455 C16orf86Q6ZW13 317 aa17.45■□□□□ 0.38
ATXN2-218ENST00000549455 FERMT2Q96AC1 680 aa17.45■□□□□ 0.38
ATXN2-218ENST00000549455 FAM161BQ96MY7 647 aa17.45■□□□□ 0.38
ATXN2-218ENST00000549455 MMP19Q99542 508 aa17.45■□□□□ 0.38
ATXN2-218ENST00000549455 FBXO28Q9NVF7 368 aa17.45■□□□□ 0.38
ATXN2-218ENST00000549455 CUL9Q8IWT3 2517 aa17.44■□□□□ 0.38
ATXN2-218ENST00000549455 SLC25A27O95847 323 aa17.44■□□□□ 0.38
ATXN2-218ENST00000549455 PGK2P07205 417 aa17.44■□□□□ 0.38
ATXN2-218ENST00000549455 ADCYAP1R1P41586 468 aa17.44■□□□□ 0.38
ATXN2-218ENST00000549455 LRRC41Q15345 812 aa17.44■□□□□ 0.38
ATXN2-218ENST00000549455 UBE3CQ15386 1083 aa17.44■□□□□ 0.38
ATXN2-218ENST00000549455 KANSL2Q9H9L4 492 aa17.44■□□□□ 0.38
ATXN2-218ENST00000549455 GOPCQ9HD26 462 aa17.44■□□□□ 0.38
ATXN2-218ENST00000549455 KCTD2Q14681 263 aa17.43■□□□□ 0.38
ATXN2-218ENST00000549455 FAM83BQ5T0W9 1011 aa17.43■□□□□ 0.38
ATXN2-218ENST00000549455 DIEXFQ68CQ4 756 aaKnown RBP17.43■□□□□ 0.38
ATXN2-218ENST00000549455 ZSCAN25Q6NSZ9 544 aa17.43■□□□□ 0.38
ATXN2-218ENST00000549455 CTR9Q6PD62 1173 aa17.43■□□□□ 0.38
ATXN2-218ENST00000549455 STK11IPQ8N1F8 1099 aa17.43■□□□□ 0.38
ATXN2-218ENST00000549455 PUS7LQ9H0K6 701 aaKnown RBP17.43■□□□□ 0.38
ATXN2-218ENST00000549455 CHMP4BQ9H444 224 aaKnown RBP17.43■□□□□ 0.38
ATXN2-218ENST00000549455 SMARCA5O60264 1052 aaPredicted RBP17.42■□□□□ 0.38
ATXN2-218ENST00000549455 SNX17Q15036 470 aa17.42■□□□□ 0.38
ATXN2-218ENST00000549455 ZNF697Q5TEC3 545 aa17.42■□□□□ 0.38
ATXN2-218ENST00000549455 RIOX2Q8IUF8 465 aa17.42■□□□□ 0.38
ATXN2-218ENST00000549455 BADQ92934 168 aa17.42■□□□□ 0.38
ATXN2-218ENST00000549455 GUCD1Q96NT3 240 aa17.42■□□□□ 0.38
ATXN2-218ENST00000549455 LRRCC1Q9C099 1032 aa17.42■□□□□ 0.38
ATXN2-218ENST00000549455 XPNPEP3Q9NQH7 507 aa17.42■□□□□ 0.38
ATXN2-218ENST00000549455 PDLIM7Q9NR12 457 aa17.42■□□□□ 0.38
ATXN2-218ENST00000549455 ARPP21Q9UBL0 812 aaPredicted RBP17.42■□□□□ 0.38
ATXN2-218ENST00000549455 PPP1R9AQ9ULJ8 1098 aa17.42■□□□□ 0.38
ATXN2-218ENST00000549455 POTEB2H3BUK9 544 aa17.41■□□□□ 0.38
ATXN2-218ENST00000549455 VWA5AO00534 786 aa17.41■□□□□ 0.38
ATXN2-218ENST00000549455 RARBP10826 455 aa17.41■□□□□ 0.38
ATXN2-218ENST00000549455 STAT3P40763 770 aa17.41■□□□□ 0.38
ATXN2-218ENST00000549455 SHHQ15465 462 aa17.41■□□□□ 0.38
ATXN2-218ENST00000549455 C9orf50Q5SZB4 431 aa17.41■□□□□ 0.38
ATXN2-218ENST00000549455 TINF2Q9BSI4 451 aa17.41■□□□□ 0.38
ATXN2-218ENST00000549455 ADAMTS5Q9UNA0 930 aa17.41■□□□□ 0.38
ATXN2-218ENST00000549455 FAM109BQ6ICB4 259 aaPredicted RBP17.4■□□□□ 0.38
ATXN2-218ENST00000549455 SH3RF1Q7Z6J0 888 aa17.4■□□□□ 0.38
ATXN2-218ENST00000549455 NUP88Q99567 741 aaPredicted RBP17.4■□□□□ 0.38
ATXN2-218ENST00000549455 NRBP1Q9UHY1 535 aa17.4■□□□□ 0.38
ATXN2-218ENST00000549455 ZNF214Q9UL59 606 aaPredicted RBP17.4■□□□□ 0.38
ATXN2-218ENST00000549455 MCM3APO60318 1980 aa17.39■□□□□ 0.37
ATXN2-218ENST00000549455 PGK1P00558 417 aa17.39■□□□□ 0.37
ATXN2-218ENST00000549455 TAL1P17542 331 aaPredicted RBP17.39■□□□□ 0.37
ATXN2-218ENST00000549455 COPB2P35606 906 aa17.39■□□□□ 0.37
ATXN2-218ENST00000549455 TLE2Q04725 743 aa17.39■□□□□ 0.37
ATXN2-218ENST00000549455 ZNF792Q3KQV3 632 aa17.39■□□□□ 0.37
ATXN2-218ENST00000549455 RNF180Q86T96 592 aa17.39■□□□□ 0.37
ATXN2-218ENST00000549455 LENG1Q96BZ8 264 aaPredicted RBP17.39■□□□□ 0.37
ATXN2-218ENST00000549455 PHF24Q9UPV7 400 aa17.39■□□□□ 0.37
ATXN2-218ENST00000549455 TRIM43BA6NCK2 446 aa17.38■□□□□ 0.37
ATXN2-218ENST00000549455 MINDY4BA8MYZ0 360 aa17.38■□□□□ 0.37
ATXN2-218ENST00000549455 AKR1A1P14550 325 aa17.38■□□□□ 0.37
ATXN2-218ENST00000549455 SLC4A3P48751 1232 aa17.38■□□□□ 0.37
ATXN2-218ENST00000549455 C1orf53Q5VUE5 145 aa17.38■□□□□ 0.37
ATXN2-218ENST00000549455 REPS2Q8NFH8 660 aa17.38■□□□□ 0.37
ATXN2-218ENST00000549455 TRIM43Q96BQ3 446 aaPredicted RBP17.38■□□□□ 0.37
ATXN2-218ENST00000549455 STRBPQ96SI9 672 aaKnown RBP17.38■□□□□ 0.37
ATXN2-218ENST00000549455 SLF1Q9BQI6 1058 aa17.38■□□□□ 0.37
ATXN2-218ENST00000549455 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.38■□□□□ 0.37
ATXN2-218ENST00000549455 MKNK2Q9HBH9 465 aa17.38■□□□□ 0.37
ATXN2-218ENST00000549455 ECHDC1Q9NTX5 307 aa17.38■□□□□ 0.37
ATXN2-218ENST00000549455 CNPY2Q9Y2B0 182 aa17.38■□□□□ 0.37
ATXN2-218ENST00000549455 DIS3Q9Y2L1 958 aaKnown RBP17.38■□□□□ 0.37
ATXN2-218ENST00000549455 ROBO3Q96MS0 1386 aa17.38■□□□□ 0.37
ATXN2-218ENST00000549455 LAMA2P24043 3122 aaKnown RBP17.38■□□□□ 0.37
ATXN2-218ENST00000549455 A0A0C4DFX4 3053 aa17.37■□□□□ 0.37
ATXN2-218ENST00000549455 CLTBP09497 229 aa17.37■□□□□ 0.37
ATXN2-218ENST00000549455 ZNF865P0CJ78 1059 aaPredicted RBP17.37■□□□□ 0.37
ATXN2-218ENST00000549455 RASA1P20936 1047 aa17.37■□□□□ 0.37
ATXN2-218ENST00000549455 SNRNP48Q6IEG0 339 aaKnown RBP17.37■□□□□ 0.37
ATXN2-218ENST00000549455 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.37■□□□□ 0.372e-7■■■■□ 22.2
ATXN2-218ENST00000549455 RCAN3Q9UKA8 241 aa17.37■□□□□ 0.37
ATXN2-218ENST00000549455 A0A1W2PQ45 241 aaPredicted RBP17.36■□□□□ 0.37
ATXN2-218ENST00000549455 A0A1W2PQY0 241 aa17.36■□□□□ 0.37
ATXN2-218ENST00000549455 GSG1L2A8MUP6 293 aa17.36■□□□□ 0.37
ATXN2-218ENST00000549455 PQBP1O60828 265 aaKnown RBP17.36■□□□□ 0.37
ATXN2-218ENST00000549455 NDUFB10O96000 172 aa17.36■□□□□ 0.37
ATXN2-218ENST00000549455 SBK1Q52WX2 424 aa17.36■□□□□ 0.37
ATXN2-218ENST00000549455 DDX11Q96FC9 970 aa17.36■□□□□ 0.37
ATXN2-218ENST00000549455 TEX13BQ9BXU2 312 aa17.36■□□□□ 0.37
ATXN2-218ENST00000549455 CTDP1Q9Y5B0 961 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms