RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 FOXP2O15409 715 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 RAD21O60216 631 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 SLC25A27O95847 323 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 NUCB1Q02818 461 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 KLRC3Q07444 240 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 PLS1Q14651 629 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 FAM83BQ5T0W9 1011 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 B4GALNT3Q6L9W6 998 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 CCDC129Q6ZRS4 1044 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 NEDD1Q8NHV4 660 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 OSBPL3Q9H4L5 887 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 FBXO28Q9NVF7 368 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 CLIP2Q9UDT6 1046 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 PPP1R9AQ9ULJ8 1098 aa22.19■■□□□ 1.14
CHMP1A-207ENST00000549328 PARP14Q460N5 1801 aa22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 PLIN4Q96Q06 1357 aa22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 VWA5AO00534 786 aa22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 SLC34A2O95436 690 aa22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 TTLL1O95922 423 aa22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 TMEM132BQ14DG7 1078 aa22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 ALX1Q15699 326 aa22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 NECAB2Q7Z6G3 386 aa22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 DPP9Q86TI2 863 aa22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 CEP95Q96GE4 821 aa22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 PAWRQ96IZ0 340 aaKnown RBP22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 SUPT16HQ9Y5B9 1047 aaKnown RBP22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 CEP290O15078 2479 aa22.18■■□□□ 1.14
CHMP1A-207ENST00000549328 H0YGN5 161 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 NDUFB10O96000 172 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 IGHA2P01877 340 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 TSPY3P0CV98 308 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 TSPY8P0CW00 308 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 ADORA2AP29274 412 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 MCMDC2Q4G0Z9 681 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 SAMD1Q6SPF0 538 aaPredicted RBP22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 NCAPG2Q86XI2 1143 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 NPLOC4Q8TAT6 608 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 SLC5A4Q9NY91 659 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 FLRT1Q9NZU1 646 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 ANAPC4Q9UJX5 808 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 NR2E3Q9Y5X4 410 aa22.17■■□□□ 1.14
CHMP1A-207ENST00000549328 ZNF236Q9UL36 1845 aa22.16■■□□□ 1.14
CHMP1A-207ENST00000549328 TFAP4Q01664 338 aa22.16■■□□□ 1.14
CHMP1A-207ENST00000549328 PPP4R3BQ5MIZ7 849 aa22.16■■□□□ 1.14
CHMP1A-207ENST00000549328 OLFML2BQ68BL8 750 aa22.16■■□□□ 1.14
CHMP1A-207ENST00000549328 RIOX2Q8IUF8 465 aa22.16■■□□□ 1.14
CHMP1A-207ENST00000549328 PLEKHM2Q8IWE5 1019 aa22.16■■□□□ 1.14
CHMP1A-207ENST00000549328 PRPF38AQ8NAV1 312 aaKnown RBP22.16■■□□□ 1.14
CHMP1A-207ENST00000549328 SLF1Q9BQI6 1058 aa22.16■■□□□ 1.14
CHMP1A-207ENST00000549328 NBPF3Q9H094 633 aa22.16■■□□□ 1.14
CHMP1A-207ENST00000549328 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.16■■□□□ 1.14
CHMP1A-207ENST00000549328 TRIM6-TRIM34B2RNG4 842 aa22.15■■□□□ 1.14
CHMP1A-207ENST00000549328 FCER1AP12319 257 aa22.15■■□□□ 1.14
CHMP1A-207ENST00000549328 CCND3P30281 292 aaPredicted RBP22.15■■□□□ 1.14
CHMP1A-207ENST00000549328 COPB2P35606 906 aa22.15■■□□□ 1.14
CHMP1A-207ENST00000549328 STAT3P40763 770 aa22.15■■□□□ 1.14
CHMP1A-207ENST00000549328 VPS53Q5VIR6 699 aa22.15■■□□□ 1.14
CHMP1A-207ENST00000549328 LHX8Q68G74 356 aa22.15■■□□□ 1.14
CHMP1A-207ENST00000549328 GMCL1P1Q8NEA9 526 aa22.15■■□□□ 1.14
CHMP1A-207ENST00000549328 REPS2Q8NFH8 660 aa22.15■■□□□ 1.14
CHMP1A-207ENST00000549328 FAM227BQ96M60 508 aa22.15■■□□□ 1.14
CHMP1A-207ENST00000549328 ZNF214Q9UL59 606 aaPredicted RBP22.15■■□□□ 1.14
CHMP1A-207ENST00000549328 A0A0D9SFI3 127 aa22.14■■□□□ 1.13
CHMP1A-207ENST00000549328 MNX1P50219 401 aaPredicted RBP22.14■■□□□ 1.13
CHMP1A-207ENST00000549328 FAM47AQ5JRC9 791 aa22.14■■□□□ 1.13
CHMP1A-207ENST00000549328 DIS3LQ8TF46 1054 aaKnown RBP22.14■■□□□ 1.13
CHMP1A-207ENST00000549328 NUP88Q99567 741 aaPredicted RBP22.14■■□□□ 1.13
CHMP1A-207ENST00000549328 MSCO60682 206 aa22.13■■□□□ 1.13
CHMP1A-207ENST00000549328 COBLO75128 1261 aa22.13■■□□□ 1.13
CHMP1A-207ENST00000549328 HABP4Q5JVS0 413 aaKnown RBP22.13■■□□□ 1.13
CHMP1A-207ENST00000549328 RILPL2Q969X0 211 aa22.13■■□□□ 1.13
CHMP1A-207ENST00000549328 MYH4Q9Y623 1939 aa22.13■■□□□ 1.13
CHMP1A-207ENST00000549328 EVI5O60447 810 aa22.12■■□□□ 1.13
CHMP1A-207ENST00000549328 FGAP02671 866 aa22.12■■□□□ 1.13
CHMP1A-207ENST00000549328 FGRP09769 529 aa22.12■■□□□ 1.13
CHMP1A-207ENST00000549328 CYP2C19P33261 490 aa22.12■■□□□ 1.13
CHMP1A-207ENST00000549328 CTDSPL2Q05D32 466 aa22.12■■□□□ 1.13
CHMP1A-207ENST00000549328 NMIQ13287 307 aaPredicted RBP22.12■■□□□ 1.13
CHMP1A-207ENST00000549328 FEM1BQ9UK73 627 aa22.12■■□□□ 1.13
CHMP1A-207ENST00000549328 COL11A1P12107 1806 aaPredicted RBP22.12■■□□□ 1.13
CHMP1A-207ENST00000549328 ZMYM6O95789 1325 aa22.11■■□□□ 1.13
CHMP1A-207ENST00000549328 TSPY2A6NKD2 308 aa22.11■■□□□ 1.13
CHMP1A-207ENST00000549328 ATP2A1O14983 1001 aa22.11■■□□□ 1.13
CHMP1A-207ENST00000549328 ORC4O43929 436 aa22.11■■□□□ 1.13
CHMP1A-207ENST00000549328 HSPD1P10809 573 aaKnown RBP22.11■■□□□ 1.13
CHMP1A-207ENST00000549328 SDSP20132 328 aa22.11■■□□□ 1.13
CHMP1A-207ENST00000549328 MFAP1P55081 439 aaKnown RBP22.11■■□□□ 1.13
CHMP1A-207ENST00000549328 LRRC47Q8N1G4 583 aaKnown RBP22.11■■□□□ 1.13
CHMP1A-207ENST00000549328 TEX13BQ9BXU2 312 aa22.11■■□□□ 1.13
CHMP1A-207ENST00000549328 C11orf49Q9H6J7 331 aa22.11■■□□□ 1.13
CHMP1A-207ENST00000549328 ZBED4O75132 1171 aa22.1■■□□□ 1.13
CHMP1A-207ENST00000549328 BMP3P12645 472 aa22.1■■□□□ 1.13
CHMP1A-207ENST00000549328 CYBAP13498 195 aa22.1■■□□□ 1.13
CHMP1A-207ENST00000549328 KCTD2Q14681 263 aa22.1■■□□□ 1.13
CHMP1A-207ENST00000549328 SLFN13Q68D06 897 aa22.1■■□□□ 1.13
CHMP1A-207ENST00000549328 ZNF589Q86UQ0 364 aaPredicted RBP22.1■■□□□ 1.13
CHMP1A-207ENST00000549328 MAML3Q96JK9 1138 aa22.1■■□□□ 1.13
CHMP1A-207ENST00000549328 MMP19Q99542 508 aa22.1■■□□□ 1.13
CHMP1A-207ENST00000549328 INCENPQ9NQS7 918 aa22.1■■□□□ 1.13
CHMP1A-207ENST00000549328 DDX20Q9UHI6 824 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms