RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 MAML3Q96JK9 1138 aa14.84□□□□□ -0.03
DDX54-206ENST00000549271 SPATC1LQ9H0A9 340 aa14.84□□□□□ -0.03
DDX54-206ENST00000549271 SNRKQ9NRH2 765 aa14.84□□□□□ -0.03
DDX54-206ENST00000549271 SLC5A4Q9NY91 659 aa14.84□□□□□ -0.03
DDX54-206ENST00000549271 SAP30BPQ9UHR5 308 aaKnown RBP14.84□□□□□ -0.03
DDX54-206ENST00000549271 NRBP1Q9UHY1 535 aa14.84□□□□□ -0.03
DDX54-206ENST00000549271 RCAN3Q9UKA8 241 aa14.84□□□□□ -0.03
DDX54-206ENST00000549271 PARP14Q460N5 1801 aa14.84□□□□□ -0.03
DDX54-206ENST00000549271 DCDC2CA8MYV0 355 aa14.83□□□□□ -0.04
DDX54-206ENST00000549271 SURF6O75683 361 aaKnown RBP14.83□□□□□ -0.04
DDX54-206ENST00000549271 PGK1P00558 417 aa14.83□□□□□ -0.04
DDX54-206ENST00000549271 HLA-DOAP06340 250 aa14.83□□□□□ -0.04
DDX54-206ENST00000549271 IGFBP4P22692 258 aa14.83□□□□□ -0.04
DDX54-206ENST00000549271 TMED8Q6PL24 325 aaPredicted RBP14.83□□□□□ -0.04
DDX54-206ENST00000549271 EPHX3Q9H6B9 360 aa14.83□□□□□ -0.04
DDX54-206ENST00000549271 PPIGQ13427 754 aaKnown RBP eCLIP14.82□□□□□ -0.04
DDX54-206ENST00000549271 OS9Q13438 667 aaPredicted RBP14.82□□□□□ -0.04
DDX54-206ENST00000549271 COG2Q14746 738 aa14.82□□□□□ -0.04
DDX54-206ENST00000549271 RAB3GAP1Q15042 981 aa14.82□□□□□ -0.04
DDX54-206ENST00000549271 CCDC174Q6PII3 467 aa14.82□□□□□ -0.04
DDX54-206ENST00000549271 CERS3Q8IU89 383 aa14.82□□□□□ -0.04
DDX54-206ENST00000549271 TSEN34Q9BSV6 310 aaKnown RBP14.82□□□□□ -0.04
DDX54-206ENST00000549271 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
DDX54-206ENST00000549271 HOXC10Q9NYD6 342 aa14.82□□□□□ -0.04
DDX54-206ENST00000549271 DBNLQ9UJU6 430 aaKnown RBP14.82□□□□□ -0.04
DDX54-206ENST00000549271 ADAMTS4O75173 837 aa14.81□□□□□ -0.04
DDX54-206ENST00000549271 ZAP70P43403 619 aa14.81□□□□□ -0.04
DDX54-206ENST00000549271 ACLYP53396 1101 aa14.81□□□□□ -0.04
DDX54-206ENST00000549271 TFF2Q03403 129 aa14.81□□□□□ -0.04
DDX54-206ENST00000549271 RAB30Q15771 203 aa14.81□□□□□ -0.04
DDX54-206ENST00000549271 EHD4Q9H223 541 aa14.81□□□□□ -0.04
DDX54-206ENST00000549271 MROH8Q9H579 483 aa14.81□□□□□ -0.04
DDX54-206ENST00000549271 PIH1D3Q9NQM4 214 aaKnown RBP14.81□□□□□ -0.04
DDX54-206ENST00000549271 MSRAQ9UJ68 235 aa14.81□□□□□ -0.04
DDX54-206ENST00000549271 COL11A1P12107 1806 aaPredicted RBP14.8□□□□□ -0.04
DDX54-206ENST00000549271 MS4A1P11836 297 aa14.8□□□□□ -0.04
DDX54-206ENST00000549271 GUCY1A2P33402 732 aa14.8□□□□□ -0.04
DDX54-206ENST00000549271 KCNQ1P51787 676 aa14.8□□□□□ -0.04
DDX54-206ENST00000549271 AAK1Q2M2I8 961 aa14.8□□□□□ -0.04
DDX54-206ENST00000549271 ABCB5Q2M3G0 1257 aa14.8□□□□□ -0.04
DDX54-206ENST00000549271 CEP85Q6P2H3 762 aa14.8□□□□□ -0.04
DDX54-206ENST00000549271 ZNF365Q70YC5 407 aa14.8□□□□□ -0.04
DDX54-206ENST00000549271 EAF2Q96CJ1 260 aaPredicted RBP14.8□□□□□ -0.04
DDX54-206ENST00000549271 STARD7Q9NQZ5 370 aa14.8□□□□□ -0.04
DDX54-206ENST00000549271 SERPINB13Q9UIV8 391 aa14.8□□□□□ -0.04
DDX54-206ENST00000549271 LRRC37A2A6NM11 1700 aa14.79□□□□□ -0.04
DDX54-206ENST00000549271 ZNF865P0CJ78 1059 aaPredicted RBP14.79□□□□□ -0.04
DDX54-206ENST00000549271 CSF2RAP15509 400 aa14.79□□□□□ -0.04
DDX54-206ENST00000549271 TAL1P17542 331 aaPredicted RBP14.79□□□□□ -0.04
DDX54-206ENST00000549271 CDK7P50613 346 aa14.79□□□□□ -0.04
DDX54-206ENST00000549271 CERKLQ49MI3 558 aaPredicted RBP14.79□□□□□ -0.04
DDX54-206ENST00000549271 PRRC2BQ5JSZ5 2229 aaKnown RBP14.79□□□□□ -0.04
DDX54-206ENST00000549271 TMEM31Q5JXX7 168 aa14.79□□□□□ -0.04
DDX54-206ENST00000549271 CCSAPQ6IQ19 270 aaPredicted RBP14.79□□□□□ -0.04
DDX54-206ENST00000549271 PSRC1Q6PGN9 363 aaPredicted RBP14.79□□□□□ -0.04
DDX54-206ENST00000549271 MB21D1Q8N884 522 aa14.79□□□□□ -0.04
DDX54-206ENST00000549271 NUP133Q8WUM0 1156 aa14.79□□□□□ -0.04
DDX54-206ENST00000549271 NKX2-4Q9H2Z4 354 aa14.79□□□□□ -0.04
DDX54-206ENST00000549271 C11orf16Q9NQ32 467 aa14.79□□□□□ -0.04
DDX54-206ENST00000549271 YBX2Q9Y2T7 364 aaKnown RBP14.79□□□□□ -0.04
DDX54-206ENST00000549271 COG6Q9Y2V7 657 aa14.79□□□□□ -0.04
DDX54-206ENST00000549271 MROH7Q68CQ1 1323 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 MOXD2PA6NHM9 499 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 ERC2O15083 957 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 ACRP10323 421 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 FCER1AP12319 257 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 AKR1A1P14550 325 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 CYP7A1P22680 504 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 DYNLL1P63167 89 aaKnown RBP14.78□□□□□ -0.04
DDX54-206ENST00000549271 NCAPG2Q86XI2 1143 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 TMEM199Q8N511 208 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 KLHDC9Q8NEP7 349 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 HERVK_113Q902F9 699 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 LENG1Q96BZ8 264 aaPredicted RBP14.78□□□□□ -0.04
DDX54-206ENST00000549271 TINF2Q9BSI4 451 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 CCDC8Q9H0W5 538 aaPredicted RBP14.78□□□□□ -0.04
DDX54-206ENST00000549271 SLC28A3Q9HAS3 691 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 ZBTB40Q9NUA8 1239 aa14.78□□□□□ -0.04
DDX54-206ENST00000549271 TLR7Q9NYK1 1049 aaKnown RBP14.78□□□□□ -0.04
DDX54-206ENST00000549271 SYNRGQ9UMZ2 1314 aa14.77□□□□□ -0.04
DDX54-206ENST00000549271 A0A1W2PRG0 241 aa14.77□□□□□ -0.05
DDX54-206ENST00000549271 GPR37L1O60883 481 aa14.77□□□□□ -0.05
DDX54-206ENST00000549271 DSG3P32926 999 aa14.77□□□□□ -0.05
DDX54-206ENST00000549271 SHMT1P34896 483 aa14.77□□□□□ -0.05
DDX54-206ENST00000549271 C20orf194Q5TEA3 1177 aa14.77□□□□□ -0.05
DDX54-206ENST00000549271 ERC1Q8IUD2 1116 aa14.77□□□□□ -0.05
DDX54-206ENST00000549271 TANGO6Q9C0B7 1094 aa14.77□□□□□ -0.05
DDX54-206ENST00000549271 CABP5Q9NP86 173 aa14.77□□□□□ -0.05
DDX54-206ENST00000549271 DIS3Q9Y2L1 958 aaKnown RBP14.77□□□□□ -0.05
DDX54-206ENST00000549271 ELP1O95163 1332 aa14.76□□□□□ -0.05
DDX54-206ENST00000549271 PLS1Q14651 629 aa14.76□□□□□ -0.05
DDX54-206ENST00000549271 SEPT2Q15019 361 aa14.76□□□□□ -0.05
DDX54-206ENST00000549271 KCNA10Q16322 511 aa14.76□□□□□ -0.05
DDX54-206ENST00000549271 ZNF792Q3KQV3 632 aa14.76□□□□□ -0.05
DDX54-206ENST00000549271 KIAA1755Q5JYT7 1200 aa14.76□□□□□ -0.05
DDX54-206ENST00000549271 ALYREFQ86V81 257 aaKnown RBP14.76□□□□□ -0.05
DDX54-206ENST00000549271 SIRT2Q8IXJ6 389 aa14.76□□□□□ -0.05
DDX54-206ENST00000549271 IL23AQ9NPF7 189 aa14.76□□□□□ -0.05
DDX54-206ENST00000549271 DDX19BQ9UMR2 479 aa14.76□□□□□ -0.05
DDX54-206ENST00000549271 IDH1O75874 414 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms