RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 ADAMTS4O75173 837 aa16.41■□□□□ 0.22
CDX2-202ENST00000548877 BCAR3O75815 825 aa16.41■□□□□ 0.22
CDX2-202ENST00000548877 FLOT1O75955 427 aa16.41■□□□□ 0.22
CDX2-202ENST00000548877 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
CDX2-202ENST00000548877 ZNF865P0CJ78 1059 aaPredicted RBP16.41■□□□□ 0.22
CDX2-202ENST00000548877 EVX2Q03828 476 aa16.41■□□□□ 0.22
CDX2-202ENST00000548877 FAAP100Q0VG06 881 aa16.41■□□□□ 0.22
CDX2-202ENST00000548877 TMEM132BQ14DG7 1078 aa16.41■□□□□ 0.22
CDX2-202ENST00000548877 RIOX2Q8IUF8 465 aa16.41■□□□□ 0.22
CDX2-202ENST00000548877 CRNKL1Q9BZJ0 848 aaKnown RBP16.41■□□□□ 0.22
CDX2-202ENST00000548877 ZNF576Q9H609 170 aa16.41■□□□□ 0.22
CDX2-202ENST00000548877 VCPKMTQ9H867 229 aa16.41■□□□□ 0.22
CDX2-202ENST00000548877 NCOR1O75376 2440 aa16.41■□□□□ 0.22
CDX2-202ENST00000548877 MYO9BQ13459 2157 aa16.4■□□□□ 0.22
CDX2-202ENST00000548877 PGK1P00558 417 aa16.4■□□□□ 0.22
CDX2-202ENST00000548877 AKR1A1P14550 325 aa16.4■□□□□ 0.22
CDX2-202ENST00000548877 PLS1Q14651 629 aa16.4■□□□□ 0.22
CDX2-202ENST00000548877 RASIP1Q5U651 963 aa16.4■□□□□ 0.22
CDX2-202ENST00000548877 MSL3Q8N5Y2 521 aaKnown RBP16.4■□□□□ 0.22
CDX2-202ENST00000548877 KLHDC9Q8NEP7 349 aa16.4■□□□□ 0.22
CDX2-202ENST00000548877 CLUAP1Q96AJ1 413 aa16.4■□□□□ 0.22
CDX2-202ENST00000548877 SH2D4AQ9H788 454 aa16.4■□□□□ 0.22
CDX2-202ENST00000548877 DCP1AQ9NPI6 582 aaPredicted RBP16.4■□□□□ 0.22
CDX2-202ENST00000548877 TMEM39AQ9NV64 488 aa16.4■□□□□ 0.22
CDX2-202ENST00000548877 MCM9Q9NXL9 1143 aa16.4■□□□□ 0.22
CDX2-202ENST00000548877 CHD9Q3L8U1 2897 aa16.39■□□□□ 0.21
CDX2-202ENST00000548877 MPHOSPH10O00566 681 aaKnown RBP16.39■□□□□ 0.21
CDX2-202ENST00000548877 PQBP1O60828 265 aaKnown RBP16.39■□□□□ 0.21
CDX2-202ENST00000548877 TIMP1P01033 207 aa16.39■□□□□ 0.21
CDX2-202ENST00000548877 COPB2P35606 906 aa16.39■□□□□ 0.21
CDX2-202ENST00000548877 TTF1Q15361 905 aaPredicted RBP16.39■□□□□ 0.21
CDX2-202ENST00000548877 AKNAD1Q5T1N1 836 aa16.39■□□□□ 0.21
CDX2-202ENST00000548877 CCSAPQ6IQ19 270 aaPredicted RBP16.39■□□□□ 0.21
CDX2-202ENST00000548877 SLC44A5Q8NCS7 719 aa16.39■□□□□ 0.21
CDX2-202ENST00000548877 ATXN2LQ8WWM7 1075 aaKnown RBP16.39■□□□□ 0.21
CDX2-202ENST00000548877 FRAT1Q92837 279 aaPredicted RBP16.39■□□□□ 0.21
CDX2-202ENST00000548877 CCDC17Q96LX7 622 aa16.39■□□□□ 0.21
CDX2-202ENST00000548877 MMP19Q99542 508 aa16.39■□□□□ 0.21
CDX2-202ENST00000548877 ARHGEF10LQ9HCE6 1279 aa16.39■□□□□ 0.21
CDX2-202ENST00000548877 TBX21Q9UL17 535 aa16.39■□□□□ 0.21
CDX2-202ENST00000548877 TCRBV5S4A2TA0A5A2 114 aa16.38■□□□□ 0.21
CDX2-202ENST00000548877 MOXD2PA6NHM9 499 aa16.38■□□□□ 0.21
CDX2-202ENST00000548877 DCDC2CA8MYV0 355 aa16.38■□□□□ 0.21
CDX2-202ENST00000548877 PDE6AP16499 860 aa16.38■□□□□ 0.21
CDX2-202ENST00000548877 TAL1P17542 331 aaPredicted RBP16.38■□□□□ 0.21
CDX2-202ENST00000548877 COL9A1P20849 921 aa16.38■□□□□ 0.21
CDX2-202ENST00000548877 ACLYP53396 1101 aa16.38■□□□□ 0.21
CDX2-202ENST00000548877 NUP133Q8WUM0 1156 aa16.38■□□□□ 0.21
CDX2-202ENST00000548877 TIFAQ96CG3 184 aa16.38■□□□□ 0.21
CDX2-202ENST00000548877 PGK2P07205 417 aa16.37■□□□□ 0.21
CDX2-202ENST00000548877 AKR1B1P15121 316 aa16.37■□□□□ 0.21
CDX2-202ENST00000548877 CST5P28325 142 aaPredicted RBP16.37■□□□□ 0.21
CDX2-202ENST00000548877 CDK7P50613 346 aa16.37■□□□□ 0.21
CDX2-202ENST00000548877 ICA1Q05084 483 aa16.37■□□□□ 0.21
CDX2-202ENST00000548877 KCTD2Q14681 263 aa16.37■□□□□ 0.21
CDX2-202ENST00000548877 SLC9C2Q5TAH2 1124 aa16.37■□□□□ 0.21
CDX2-202ENST00000548877 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
CDX2-202ENST00000548877 MFSD5Q6N075 450 aa16.37■□□□□ 0.21
CDX2-202ENST00000548877 SPICE1Q8N0Z3 855 aa16.37■□□□□ 0.21
CDX2-202ENST00000548877 REPS2Q8NFH8 660 aa16.37■□□□□ 0.21
CDX2-202ENST00000548877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDX2-202ENST00000548877 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDX2-202ENST00000548877 STARD7Q9NQZ5 370 aa16.37■□□□□ 0.21
CDX2-202ENST00000548877 ZNF214Q9UL59 606 aaPredicted RBP16.37■□□□□ 0.21
CDX2-202ENST00000548877 VWA5AO00534 786 aa16.36■□□□□ 0.21
CDX2-202ENST00000548877 STAT3P40763 770 aa16.36■□□□□ 0.21
CDX2-202ENST00000548877 MAMDC4Q6UXC1 1216 aa16.36■□□□□ 0.21
CDX2-202ENST00000548877 C16orf59Q7L2K0 433 aa16.36■□□□□ 0.21
CDX2-202ENST00000548877 ERC1Q8IUD2 1116 aa16.36■□□□□ 0.21
CDX2-202ENST00000548877 SDR42E1Q8WUS8 393 aa16.36■□□□□ 0.21
CDX2-202ENST00000548877 PPP1R9AQ9ULJ8 1098 aa16.36■□□□□ 0.21
CDX2-202ENST00000548877 ELP1O95163 1332 aa16.36■□□□□ 0.21
CDX2-202ENST00000548877 MROH7Q68CQ1 1323 aa16.36■□□□□ 0.21
CDX2-202ENST00000548877 SYNGAP1Q96PV0 1343 aa16.36■□□□□ 0.21
CDX2-202ENST00000548877 SYNRGQ9UMZ2 1314 aa16.36■□□□□ 0.21
CDX2-202ENST00000548877 BAZ2AQ9UIF9 1905 aaKnown RBP16.35■□□□□ 0.21
CDX2-202ENST00000548877 DNAJC25-GNG10A0A024R161 153 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 DUSP11O75319 330 aaKnown RBP16.35■□□□□ 0.21
CDX2-202ENST00000548877 CYP2D6P10635 497 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 PPIGQ13427 754 aaKnown RBP eCLIP16.35■□□□□ 0.21
CDX2-202ENST00000548877 TMEM240Q5SV17 173 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 CCDC174Q6PII3 467 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.35■□□□□ 0.21
CDX2-202ENST00000548877 CLEC10AQ8IUN9 316 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 LCORLQ8N3X6 602 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 DYNLL2Q96FJ2 89 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 ASB2Q96Q27 587 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 PBX4Q9BYU1 374 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 C1orf115Q9H7X2 142 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 ATP8A2Q9NTI2 1148 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 FBXO28Q9NVF7 368 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 FAM184BQ9ULE4 1060 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 CNPY2Q9Y2B0 182 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 ZNF532Q9HCE3 1301 aa16.35■□□□□ 0.21
CDX2-202ENST00000548877 SNAI1O95863 264 aaPredicted RBP16.34■□□□□ 0.21
CDX2-202ENST00000548877 NKX3-2P78367 333 aa16.34■□□□□ 0.21
CDX2-202ENST00000548877 KCNA10Q16322 511 aa16.34■□□□□ 0.21
CDX2-202ENST00000548877 C12orf60Q5U649 245 aa16.34■□□□□ 0.21
CDX2-202ENST00000548877 ZNF467Q7Z7K2 595 aaPredicted RBP16.34■□□□□ 0.21
CDX2-202ENST00000548877 AACSQ86V21 672 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms